RNA–Protein interactions for RNA: ENST00000560371.5

TRAF3-208, Transcript of TNF receptor associated factor 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRAF3, Length 7,640 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3-208ENST00000560371 RHPN1-AS1Q9BWJ2 59 aa10.96□□□□□ -0.65
TRAF3-208ENST00000560371 ZNF48Q96MX3 618 aaPredicted RBP10.96□□□□□ -0.66
TRAF3-208ENST00000560371 CARHSP1Q9Y2V2 147 aaKnown RBP10.96□□□□□ -0.66
TRAF3-208ENST00000560371 LINC00158P58513 81 aa10.96□□□□□ -0.66
TRAF3-208ENST00000560371 CR1LQ2VPA4 569 aa10.96□□□□□ -0.66
TRAF3-208ENST00000560371 KIAA1549LQ6ZVL6 1849 aa10.96□□□□□ -0.66
TRAF3-208ENST00000560371 DDTP30046 118 aa10.95□□□□□ -0.66
TRAF3-208ENST00000560371 IGHV1-69DA0A0B4J2H0 117 aa10.95□□□□□ -0.66
TRAF3-208ENST00000560371 PGPEP1LA6NFU8 196 aa10.95□□□□□ -0.66
TRAF3-208ENST00000560371 IGHV1-69P01742 117 aa10.95□□□□□ -0.66
TRAF3-208ENST00000560371 HBDP02042 147 aa10.95□□□□□ -0.66
TRAF3-208ENST00000560371 GATD1Q8NB37 220 aa10.95□□□□□ -0.66
TRAF3-208ENST00000560371 CA1P00915 261 aaPredicted RBP10.95□□□□□ -0.66
TRAF3-208ENST00000560371 PLNP26678 52 aa10.95□□□□□ -0.66
TRAF3-208ENST00000560371 ZNF562Q6V9R5 426 aa10.95□□□□□ -0.66
TRAF3-208ENST00000560371 JPT2Q9H910 190 aa10.95□□□□□ -0.66
TRAF3-208ENST00000560371 LINC00205P59089 165 aa10.95□□□□□ -0.66
TRAF3-208ENST00000560371 PRSS33Q8NF86 280 aa10.95□□□□□ -0.66
TRAF3-208ENST00000560371 DEFB104AQ8WTQ1 72 aa10.95□□□□□ -0.66
TRAF3-208ENST00000560371 IGKV1-5P01602 117 aa10.95□□□□□ -0.66
TRAF3-208ENST00000560371 IGHV3-53P01767 116 aa10.94□□□□□ -0.66
TRAF3-208ENST00000560371 HIST1H4AP62805 103 aaKnown RBP10.94□□□□□ -0.66
TRAF3-208ENST00000560371 TMEM249Q2WGJ8 235 aa10.94□□□□□ -0.66
TRAF3-208ENST00000560371 TSKUQ8WUA8 353 aa10.94□□□□□ -0.66
TRAF3-208ENST00000560371 CGB3P0DN86 165 aa10.94□□□□□ -0.66
TRAF3-208ENST00000560371 SUPT4H1P63272 117 aaKnown RBP10.94□□□□□ -0.66
TRAF3-208ENST00000560371 NMSQ5H8A3 153 aa10.94□□□□□ -0.66
TRAF3-208ENST00000560371 LHBP01229 141 aa10.94□□□□□ -0.66
TRAF3-208ENST00000560371 DPM2O94777 84 aa10.94□□□□□ -0.66
TRAF3-208ENST00000560371 ZNF876PQ49A33 203 aa10.94□□□□□ -0.66
TRAF3-208ENST00000560371 ST6GALNAC6Q969X2 333 aa10.94□□□□□ -0.66
TRAF3-208ENST00000560371 TLN2Q9Y4G6 2542 aa10.94□□□□□ -0.66
TRAF3-208ENST00000560371 OVOL3O00110 214 aa10.93□□□□□ -0.66
TRAF3-208ENST00000560371 CGB7P0DN87 165 aa10.93□□□□□ -0.66
TRAF3-208ENST00000560371 LURAP1LQ8IV03 231 aa10.93□□□□□ -0.66
TRAF3-208ENST00000560371 C5orf24Q7Z6I8 188 aa10.93□□□□□ -0.66
TRAF3-208ENST00000560371 TOMM40O96008 361 aa10.93□□□□□ -0.66
TRAF3-208ENST00000560371 CEACAM8P31997 349 aaPredicted RBP10.93□□□□□ -0.66
TRAF3-208ENST00000560371 CTAG1AP78358 180 aa10.93□□□□□ -0.66
TRAF3-208ENST00000560371 AGMATQ9BSE5 352 aa10.93□□□□□ -0.66
TRAF3-208ENST00000560371 RFNGQ9Y644 331 aa10.93□□□□□ -0.66
TRAF3-208ENST00000560371 IGF2RP11717 2491 aa10.93□□□□□ -0.66
TRAF3-208ENST00000560371 ZNF106Q9H2Y7 1883 aaKnown RBP10.93□□□□□ -0.66
TRAF3-208ENST00000560371 LINC01549A6NIU2 74 aa10.93□□□□□ -0.66
TRAF3-208ENST00000560371 SLC25A2Q9BXI2 301 aa10.93□□□□□ -0.66
TRAF3-208ENST00000560371 LAMTOR3Q9UHA4 124 aa10.93□□□□□ -0.66
TRAF3-208ENST00000560371 EP400Q96L91 3159 aa10.93□□□□□ -0.66
TRAF3-208ENST00000560371 TRAV2A0A0B4J234 112 aa10.93□□□□□ -0.66
TRAF3-208ENST00000560371 IGHV2-70DA0A0C4DH43 119 aa10.93□□□□□ -0.66
TRAF3-208ENST00000560371 OBSL1O75147 1896 aa10.92□□□□□ -0.66
TRAF3-208ENST00000560371 GNB1LQ9BYB4 327 aa10.92□□□□□ -0.66
TRAF3-208ENST00000560371 DEFB130BP0DP73 79 aa10.92□□□□□ -0.66
TRAF3-208ENST00000560371 DEFB130AP0DP74 79 aa10.92□□□□□ -0.66
TRAF3-208ENST00000560371 FOXL2NBQ6ZUU3 175 aa10.92□□□□□ -0.66
TRAF3-208ENST00000560371 NCOR2Q9Y618 2525 aa10.92□□□□□ -0.66
TRAF3-208ENST00000560371 GGTLC3B5MD39 225 aa10.92□□□□□ -0.66
TRAF3-208ENST00000560371 J3QLI3 93 aa10.92□□□□□ -0.66
TRAF3-208ENST00000560371 DEFB131AP59861 70 aa10.92□□□□□ -0.66
TRAF3-208ENST00000560371 F8WEM9 126 aa10.92□□□□□ -0.66
TRAF3-208ENST00000560371 SERF1AO75920 110 aa10.92□□□□□ -0.66
TRAF3-208ENST00000560371 LAGE3Q14657 143 aa10.91□□□□□ -0.66
TRAF3-208ENST00000560371 Q8TAT8 98 aa10.91□□□□□ -0.66
TRAF3-208ENST00000560371 NTF4P34130 210 aa10.91□□□□□ -0.66
TRAF3-208ENST00000560371 TMEM14EPQ6UXP3 125 aa10.91□□□□□ -0.66
TRAF3-208ENST00000560371 ATP5L2Q7Z4Y8 100 aa10.91□□□□□ -0.66
TRAF3-208ENST00000560371 LYPD1Q8N2G4 141 aa10.91□□□□□ -0.66
TRAF3-208ENST00000560371 WFDC1Q9HC57 220 aa10.91□□□□□ -0.66
TRAF3-208ENST00000560371 A8MXK9 166 aa10.91□□□□□ -0.66
TRAF3-208ENST00000560371 ADMP35318 185 aa10.91□□□□□ -0.66
TRAF3-208ENST00000560371 RNF144BQ7Z419 303 aa10.91□□□□□ -0.66
TRAF3-208ENST00000560371 ATP6V0E1O15342 81 aa10.91□□□□□ -0.66
TRAF3-208ENST00000560371 GATA4P43694 442 aa10.91□□□□□ -0.66
TRAF3-208ENST00000560371 PRDM13Q9H4Q3 707 aa10.91□□□□□ -0.66
TRAF3-208ENST00000560371 ZNRD1Q9P1U0 126 aa10.91□□□□□ -0.66
TRAF3-208ENST00000560371 HOXD3P31249 432 aaPredicted RBP10.91□□□□□ -0.66
TRAF3-208ENST00000560371 NRN1Q9NPD7 142 aa10.91□□□□□ -0.66
TRAF3-208ENST00000560371 CHTOPQ9Y3Y2 248 aaKnown RBP10.91□□□□□ -0.66
TRAF3-208ENST00000560371 SPCS1Q9Y6A9 102 aa10.91□□□□□ -0.66
TRAF3-208ENST00000560371 VSIRQ9H7M9 311 aa10.91□□□□□ -0.66
TRAF3-208ENST00000560371 C2CD3Q4AC94 2353 aa10.9□□□□□ -0.66
TRAF3-208ENST00000560371 MTURNQ8N3F0 131 aa10.9□□□□□ -0.66
TRAF3-208ENST00000560371 A0A1W2PPI3 338 aa10.9□□□□□ -0.66
TRAF3-208ENST00000560371 SPATA31B1PQ5VZV4 182 aa10.9□□□□□ -0.66
TRAF3-208ENST00000560371 MORN3Q6PF18 240 aaPredicted RBP10.9□□□□□ -0.66
TRAF3-208ENST00000560371 Q6ZS49 121 aa10.9□□□□□ -0.66
TRAF3-208ENST00000560371 PROK2Q9HC23 129 aa10.9□□□□□ -0.66
TRAF3-208ENST00000560371 TRAV8-1A0A0A6YYK1 113 aa10.9□□□□□ -0.66
TRAF3-208ENST00000560371 ITGB1BP1O14713 200 aa10.9□□□□□ -0.66
TRAF3-208ENST00000560371 FAM110DQ8TAY7 271 aaPredicted RBP10.9□□□□□ -0.66
TRAF3-208ENST00000560371 REG4Q9BYZ8 158 aa10.9□□□□□ -0.66
TRAF3-208ENST00000560371 RPP25LQ8N5L8 163 aaKnown RBP10.9□□□□□ -0.67
TRAF3-208ENST00000560371 IFI27L1Q96BM0 104 aa10.9□□□□□ -0.67
TRAF3-208ENST00000560371 RNASE2P10153 161 aaKnown RBP10.89□□□□□ -0.67
TRAF3-208ENST00000560371 CFHR2P36980 270 aa10.89□□□□□ -0.67
TRAF3-208ENST00000560371 NIT1Q86X76 327 aa10.89□□□□□ -0.67
TRAF3-208ENST00000560371 ZNF581Q9P0T4 197 aa10.89□□□□□ -0.67
TRAF3-208ENST00000560371 TCRAP04437 139 aa10.89□□□□□ -0.67
TRAF3-208ENST00000560371 PSG3Q16557 428 aa10.89□□□□□ -0.67
TRAF3-208ENST00000560371 TNRC6AQ8NDV7 1962 aaKnown RBP10.89□□□□□ -0.67
TRAF3-208ENST00000560371 LINC01619G3V211 115 aa10.89□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 129 ms