RNA–Protein interactions for RNA: ENST00000558868.5

TPM1-215, Transcript of tropomyosin 1, humanhuman

TSL 2

Gene TPM1, Length 653 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-215ENST00000558868 MYOZ3Q8TDC0 251 aa10.61□□□□□ -0.71
TPM1-215ENST00000558868 SMIM12Q96EX1 92 aa10.61□□□□□ -0.71
TPM1-215ENST00000558868 FMC1Q96HJ9 113 aa10.61□□□□□ -0.71
TPM1-215ENST00000558868 UBE2E2Q96LR5 201 aa10.61□□□□□ -0.71
TPM1-215ENST00000558868 DUX5Q96PT3 197 aa10.61□□□□□ -0.71
TPM1-215ENST00000558868 OR5B12Q96R08 314 aa10.61□□□□□ -0.71
TPM1-215ENST00000558868 JMJD8Q96S16 334 aa10.61□□□□□ -0.71
TPM1-215ENST00000558868 KLF12Q9Y4X4 402 aa10.61□□□□□ -0.71
TPM1-215ENST00000558868 TRBV20OR9-2A0A075B6H5 130 aa10.6□□□□□ -0.71
TPM1-215ENST00000558868 FAM181BA6NEQ2 426 aa10.6□□□□□ -0.71
TPM1-215ENST00000558868 H3BTX0 84 aa10.6□□□□□ -0.71
TPM1-215ENST00000558868 K7EMT4 169 aa10.6□□□□□ -0.71
TPM1-215ENST00000558868 TRBV12-3P01733 135 aa10.6□□□□□ -0.71
TPM1-215ENST00000558868 TCRAP04437 139 aa10.6□□□□□ -0.71
TPM1-215ENST00000558868 LGALS1P09382 135 aaKnown RBP10.6□□□□□ -0.71
TPM1-215ENST00000558868 S100PP25815 95 aa10.6□□□□□ -0.71
TPM1-215ENST00000558868 BMI1P35226 326 aa10.6□□□□□ -0.71
TPM1-215ENST00000558868 SIGLEC15Q6ZMC9 328 aa10.6□□□□□ -0.71
TPM1-215ENST00000558868 LCNL1Q6ZST4 164 aa10.6□□□□□ -0.71
TPM1-215ENST00000558868 GPHB5Q86YW7 130 aa10.6□□□□□ -0.71
TPM1-215ENST00000558868 SERTAD4Q9NUC0 356 aa10.6□□□□□ -0.71
TPM1-215ENST00000558868 ZANQ9Y493 2812 aa10.6□□□□□ -0.71
TPM1-215ENST00000558868 COLCA2A8K830 154 aa10.59□□□□□ -0.71
TPM1-215ENST00000558868 LY6G6DO95868 133 aa10.59□□□□□ -0.71
TPM1-215ENST00000558868 RPLP1P05386 114 aaKnown RBP10.59□□□□□ -0.71
TPM1-215ENST00000558868 RNASE1P07998 156 aaKnown RBP10.59□□□□□ -0.71
TPM1-215ENST00000558868 GNG5P63218 68 aa10.59□□□□□ -0.71
TPM1-215ENST00000558868 C16orf54Q6UWD8 224 aa10.59□□□□□ -0.71
TPM1-215ENST00000558868 BAGE2Q86Y30 109 aa10.59□□□□□ -0.71
TPM1-215ENST00000558868 SFRP2Q96HF1 295 aa10.59□□□□□ -0.71
TPM1-215ENST00000558868 IGF2BP2-AS1Q96M15 143 aa10.59□□□□□ -0.71
TPM1-215ENST00000558868 SLC50A1Q9BRV3 221 aa10.59□□□□□ -0.71
TPM1-215ENST00000558868 BIN3Q9NQY0 253 aa10.59□□□□□ -0.71
TPM1-215ENST00000558868 CLEC5AQ9NY25 188 aa10.59□□□□□ -0.71
TPM1-215ENST00000558868 TMA7Q9Y2S6 64 aaKnown RBP10.59□□□□□ -0.71
TPM1-215ENST00000558868 FLNAP21333 2647 aaKnown RBP10.58□□□□□ -0.72
TPM1-215ENST00000558868 IGHV3OR16-8A0A075B7F1 116 aa10.58□□□□□ -0.72
TPM1-215ENST00000558868 TRBV6-1A0A0K0K1D8 114 aa10.58□□□□□ -0.72
TPM1-215ENST00000558868 ZNF320A2RRD8 509 aa10.58□□□□□ -0.72
TPM1-215ENST00000558868 FBLL1A6NHQ2 334 aaKnown RBP10.58□□□□□ -0.72
TPM1-215ENST00000558868 KCNIP4Q6PIL6 250 aa10.58□□□□□ -0.72
TPM1-215ENST00000558868 Q6ZSV7 163 aa10.58□□□□□ -0.72
TPM1-215ENST00000558868 EXOC3-AS1Q8N2X6 119 aa10.58□□□□□ -0.72
TPM1-215ENST00000558868 KLHDC1Q8N7A1 406 aa10.58□□□□□ -0.72
TPM1-215ENST00000558868 OR10G8Q8NGN5 311 aa10.58□□□□□ -0.72
TPM1-215ENST00000558868 BTF3L4Q96K17 158 aa10.58□□□□□ -0.72
TPM1-215ENST00000558868 C17orf77Q96MU5 243 aa10.58□□□□□ -0.72
TPM1-215ENST00000558868 IMMP2LQ96T52 175 aa10.58□□□□□ -0.72
TPM1-215ENST00000558868 RPH3ALQ9UNE2 315 aa10.58□□□□□ -0.72
TPM1-215ENST00000558868 UFC1Q9Y3C8 167 aa10.58□□□□□ -0.72
TPM1-215ENST00000558868 SMAD5-AS1Q9Y6J3 95 aa10.58□□□□□ -0.72
TPM1-215ENST00000558868 PGPEP1LA6NFU8 196 aa10.57□□□□□ -0.72
TPM1-215ENST00000558868 ZNF207O43670 478 aaKnown RBP10.57□□□□□ -0.72
TPM1-215ENST00000558868 GCGP01275 180 aa10.57□□□□□ -0.72
TPM1-215ENST00000558868 HILS1P60008 231 aa10.57□□□□□ -0.72
TPM1-215ENST00000558868 RPEL1Q2QD12 228 aa10.57□□□□□ -0.72
TPM1-215ENST00000558868 C10orf99Q6UWK7 81 aa10.57□□□□□ -0.72
TPM1-215ENST00000558868 FAM24BQ8N5W8 94 aa10.57□□□□□ -0.72
TPM1-215ENST00000558868 TMEM75Q8N9X5 138 aa10.57□□□□□ -0.72
TPM1-215ENST00000558868 WFDC12Q8WWY7 111 aa10.57□□□□□ -0.72
TPM1-215ENST00000558868 ESM1Q9NQ30 184 aa10.57□□□□□ -0.72
TPM1-215ENST00000558868 DAZ1Q9NQZ3 744 aaKnown RBP10.57□□□□□ -0.72
TPM1-215ENST00000558868 IGHV7-4-1A0A0J9YVY3 117 aa10.56□□□□□ -0.72
TPM1-215ENST00000558868 SLC17A3O00476 420 aa10.56□□□□□ -0.72
TPM1-215ENST00000558868 ISLRO14498 428 aa10.56□□□□□ -0.72
TPM1-215ENST00000558868 MGST1P10620 155 aaKnown RBP10.56□□□□□ -0.72
TPM1-215ENST00000558868 ERVFC1-1P60608 527 aa10.56□□□□□ -0.72
TPM1-215ENST00000558868 ELOBQ15370 118 aa10.56□□□□□ -0.72
TPM1-215ENST00000558868 UNQ9165/PRO28630Q6UXU0 137 aa10.56□□□□□ -0.72
TPM1-215ENST00000558868 GOLT1AQ6ZVE7 132 aa10.56□□□□□ -0.72
TPM1-215ENST00000558868 GLMPQ8WWB7 406 aa10.56□□□□□ -0.72
TPM1-215ENST00000558868 LINC00479Q96M42 142 aa10.56□□□□□ -0.72
TPM1-215ENST00000558868 YPEL4Q96NS1 127 aa10.56□□□□□ -0.72
TPM1-215ENST00000558868 C16orf95Q9H693 158 aa10.56□□□□□ -0.72
TPM1-215ENST00000558868 ZNF331Q9NQX6 463 aaPredicted RBP10.56□□□□□ -0.72
TPM1-215ENST00000558868 OSTCQ9NRP0 149 aa10.56□□□□□ -0.72
TPM1-215ENST00000558868 AURKAIP1Q9NWT8 199 aaPredicted RBP10.56□□□□□ -0.72
TPM1-215ENST00000558868 TRAV34A0A0B4J273 112 aa10.55□□□□□ -0.72
TPM1-215ENST00000558868 DIRC3C9JPN6 131 aa10.55□□□□□ -0.72
TPM1-215ENST00000558868 K7EN84 100 aa10.55□□□□□ -0.72
TPM1-215ENST00000558868 IGLV2-8P01709 118 aa10.55□□□□□ -0.72
TPM1-215ENST00000558868 APOHP02749 345 aaPredicted RBP10.55□□□□□ -0.72
TPM1-215ENST00000558868 FOLR2P14207 255 aa10.55□□□□□ -0.72
TPM1-215ENST00000558868 RAB5AP20339 215 aa10.55□□□□□ -0.72
TPM1-215ENST00000558868 CDX1P47902 265 aaPredicted RBP10.55□□□□□ -0.72
TPM1-215ENST00000558868 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa10.55□□□□□ -0.72
TPM1-215ENST00000558868 REC114Q7Z4M0 266 aa10.55□□□□□ -0.72
TPM1-215ENST00000558868 MRPL53Q96EL3 112 aaKnown RBP10.55□□□□□ -0.72
TPM1-215ENST00000558868 MDFIQ99750 246 aa10.55□□□□□ -0.72
TPM1-215ENST00000558868 ZFP30Q9Y2G7 519 aa10.55□□□□□ -0.72
TPM1-215ENST00000558868 TRBV24-1A0A075B6N3 115 aa10.54□□□□□ -0.72
TPM1-215ENST00000558868 IGHV3-66A0A0C4DH42 116 aa10.54□□□□□ -0.72
TPM1-215ENST00000558868 LGALS9O00182 355 aa10.54□□□□□ -0.72
TPM1-215ENST00000558868 LTAP01374 205 aa10.54□□□□□ -0.72
TPM1-215ENST00000558868 PFN1P07737 140 aaKnown RBP10.54□□□□□ -0.72
TPM1-215ENST00000558868 FLI1Q01543 452 aaPredicted RBP10.54□□□□□ -0.72
TPM1-215ENST00000558868 PSG3Q16557 428 aa10.54□□□□□ -0.72
TPM1-215ENST00000558868 SAMD13Q5VXD3 122 aa10.54□□□□□ -0.72
TPM1-215ENST00000558868 FAM231DQ6ZW35 169 aa10.54□□□□□ -0.72
TPM1-215ENST00000558868 SMR3AQ99954 134 aa10.54□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 65.3 ms