RNA–Protein interactions for RNA: ENST00000556536.5

TUBB3-211, Transcript of tubulin beta 3 class III, humanhuman

TSL 3

Gene TUBB3, Length 925 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBB3-211ENST00000556536 OR10J4P0C629 311 aa13□□□□□ -0.33
TUBB3-211ENST00000556536 FXYD5Q96DB9 178 aa13□□□□□ -0.33
TUBB3-211ENST00000556536 PHYHIPLQ96FC7 376 aa13□□□□□ -0.33
TUBB3-211ENST00000556536 CD7P09564 240 aa12.99□□□□□ -0.33
TUBB3-211ENST00000556536 ARL14EPLP0DKL9 152 aa12.99□□□□□ -0.33
TUBB3-211ENST00000556536 HIST1H1EP10412 219 aaKnown RBP12.99□□□□□ -0.33
TUBB3-211ENST00000556536 SULT1A2P50226 295 aa12.99□□□□□ -0.33
TUBB3-211ENST00000556536 LCN15Q6UWW0 184 aa12.99□□□□□ -0.33
TUBB3-211ENST00000556536 RNF141Q8WVD5 230 aa12.99□□□□□ -0.33
TUBB3-211ENST00000556536 HRH4Q9H3N8 390 aa12.99□□□□□ -0.33
TUBB3-211ENST00000556536 TRAV8-2A0A0B4J237 113 aa12.98□□□□□ -0.33
TUBB3-211ENST00000556536 SLC17A3O00476 420 aa12.98□□□□□ -0.33
TUBB3-211ENST00000556536 PRB2P02812 416 aaPredicted RBP12.98□□□□□ -0.33
TUBB3-211ENST00000556536 UBE2L3P68036 154 aaKnown RBP12.98□□□□□ -0.33
TUBB3-211ENST00000556536 IGFL4Q6B9Z1 124 aa12.98□□□□□ -0.33
TUBB3-211ENST00000556536 DPPA3Q6W0C5 159 aa12.98□□□□□ -0.33
TUBB3-211ENST00000556536 BLNKQ8WV28 456 aa12.98□□□□□ -0.33
TUBB3-211ENST00000556536 ZMAT5Q9UDW3 170 aaKnown RBP12.98□□□□□ -0.33
TUBB3-211ENST00000556536 UBQLN2Q9UHD9 624 aa12.98□□□□□ -0.33
TUBB3-211ENST00000556536 TRBV19A0A075B6N1 114 aa12.97□□□□□ -0.33
TUBB3-211ENST00000556536 MAP1LC3B2A6NCE7 125 aa12.97□□□□□ -0.33
TUBB3-211ENST00000556536 NDUFB4O95168 129 aa12.97□□□□□ -0.33
TUBB3-211ENST00000556536 ZNF688P0C7X2 276 aa12.97□□□□□ -0.33
TUBB3-211ENST00000556536 MEOX2P50222 304 aa12.97□□□□□ -0.33
TUBB3-211ENST00000556536 RAB5CP51148 216 aa12.97□□□□□ -0.33
TUBB3-211ENST00000556536 FGF8P55075 233 aaPredicted RBP12.97□□□□□ -0.33
TUBB3-211ENST00000556536 CD81P60033 236 aa12.97□□□□□ -0.33
TUBB3-211ENST00000556536 ODF3L2Q3SX64 289 aa12.97□□□□□ -0.33
TUBB3-211ENST00000556536 PQLC2Q6ZP29 291 aa12.97□□□□□ -0.33
TUBB3-211ENST00000556536 SAT2Q96F10 170 aaPredicted RBP12.97□□□□□ -0.33
TUBB3-211ENST00000556536 C16orf92Q96LL3 132 aa12.97□□□□□ -0.33
TUBB3-211ENST00000556536 MAP1LC3BQ9GZQ8 125 aa12.97□□□□□ -0.33
TUBB3-211ENST00000556536 CXorf1O96002 111 aa12.96□□□□□ -0.33
TUBB3-211ENST00000556536 NBEAP1P0C6P0 100 aa12.96□□□□□ -0.33
TUBB3-211ENST00000556536 HLA-DMBP28068 263 aa12.96□□□□□ -0.33
TUBB3-211ENST00000556536 GCHFRP30047 84 aa12.96□□□□□ -0.33
TUBB3-211ENST00000556536 GUK1Q16774 197 aa12.96□□□□□ -0.33
TUBB3-211ENST00000556536 Q8N1Y9 231 aa12.96□□□□□ -0.33
TUBB3-211ENST00000556536 SFT2D1Q8WV19 159 aa12.96□□□□□ -0.33
TUBB3-211ENST00000556536 MBD3L1Q8WWY6 194 aa12.96□□□□□ -0.33
TUBB3-211ENST00000556536 C20orf173Q96LM9 149 aa12.96□□□□□ -0.33
TUBB3-211ENST00000556536 WFDC10AQ9H1F0 79 aa12.96□□□□□ -0.33
TUBB3-211ENST00000556536 TMPRSS5Q9H3S3 457 aa12.96□□□□□ -0.33
TUBB3-211ENST00000556536 MAP6D1Q9H9H5 199 aa12.96□□□□□ -0.33
TUBB3-211ENST00000556536 C19orf73Q9NVV2 129 aa12.96□□□□□ -0.33
TUBB3-211ENST00000556536 A0A1B0GV50 99 aa12.95□□□□□ -0.34
TUBB3-211ENST00000556536 ISLRO14498 428 aa12.95□□□□□ -0.34
TUBB3-211ENST00000556536 H2AFB1P0C5Y9 115 aa12.95□□□□□ -0.34
TUBB3-211ENST00000556536 PSMB3P49720 205 aa12.95□□□□□ -0.34
TUBB3-211ENST00000556536 TEX261Q6UWH6 196 aa12.95□□□□□ -0.34
TUBB3-211ENST00000556536 GTSCR1Q86UQ5 136 aa12.95□□□□□ -0.34
TUBB3-211ENST00000556536 RNF182Q8N6D2 247 aa12.95□□□□□ -0.34
TUBB3-211ENST00000556536 LRRC20Q8TCA0 184 aa12.95□□□□□ -0.34
TUBB3-211ENST00000556536 ZNF331Q9NQX6 463 aaPredicted RBP12.95□□□□□ -0.34
TUBB3-211ENST00000556536 AURKAIP1Q9NWT8 199 aaPredicted RBP12.95□□□□□ -0.34
TUBB3-211ENST00000556536 KMT2CQ8NEZ4 4911 aaKnown RBP12.94□□□□□ -0.34
TUBB3-211ENST00000556536 ZNF705EA8MWA4 302 aaPredicted RBP12.94□□□□□ -0.34
TUBB3-211ENST00000556536 ID1P41134 155 aa12.94□□□□□ -0.34
TUBB3-211ENST00000556536 DEFB131AP59861 70 aa12.94□□□□□ -0.34
TUBB3-211ENST00000556536 ZNF124Q15973 351 aa12.94□□□□□ -0.34
TUBB3-211ENST00000556536 PSMG4Q5JS54 123 aa12.94□□□□□ -0.34
TUBB3-211ENST00000556536 SAMD13Q5VXD3 122 aa12.94□□□□□ -0.34
TUBB3-211ENST00000556536 IQCF2Q8IXL9 164 aa12.94□□□□□ -0.34
TUBB3-211ENST00000556536 SUN5Q8TC36 379 aa12.94□□□□□ -0.34
TUBB3-211ENST00000556536 LINC00052Q96N35 136 aa12.94□□□□□ -0.34
TUBB3-211ENST00000556536 OR11H12B2RN74 326 aa12.93□□□□□ -0.34
TUBB3-211ENST00000556536 ZNF253O75346 499 aa12.93□□□□□ -0.34
TUBB3-211ENST00000556536 PRB4P10163 310 aaPredicted RBP12.93□□□□□ -0.34
TUBB3-211ENST00000556536 DEFB1P60022 68 aa12.93□□□□□ -0.34
TUBB3-211ENST00000556536 SNRPD3P62318 126 aaKnown RBP12.93□□□□□ -0.34
TUBB3-211ENST00000556536 PDE6HQ13956 83 aa12.93□□□□□ -0.34
TUBB3-211ENST00000556536 APRG1Q8IVJ8 170 aa12.93□□□□□ -0.34
TUBB3-211ENST00000556536 DEFB125Q8N687 156 aa12.93□□□□□ -0.34
TUBB3-211ENST00000556536 ZNF680Q8NEM1 530 aa12.93□□□□□ -0.34
TUBB3-211ENST00000556536 SLC50A1Q9BRV3 221 aa12.93□□□□□ -0.34
TUBB3-211ENST00000556536 RANP62826 216 aaKnown RBP12.92□□□□□ -0.34
TUBB3-211ENST00000556536 EXOC3-AS1Q8N2X6 119 aa12.92□□□□□ -0.34
TUBB3-211ENST00000556536 TMEM167BQ9NRX6 74 aa12.92□□□□□ -0.34
TUBB3-211ENST00000556536 CMC4P56277 68 aaPredicted RBP12.91□□□□□ -0.34
TUBB3-211ENST00000556536 CCL20P78556 96 aa12.91□□□□□ -0.34
TUBB3-211ENST00000556536 PSG9Q00887 426 aa12.91□□□□□ -0.34
TUBB3-211ENST00000556536 PSG3Q16557 428 aa12.91□□□□□ -0.34
TUBB3-211ENST00000556536 CITED4Q96RK1 184 aa12.91□□□□□ -0.34
TUBB3-211ENST00000556536 FAM110AQ9BQ89 295 aa12.91□□□□□ -0.34
TUBB3-211ENST00000556536 TRAV1-1A0A0B4J248 108 aa12.9□□□□□ -0.34
TUBB3-211ENST00000556536 KNCNA6PVL3 124 aa12.9□□□□□ -0.34
TUBB3-211ENST00000556536 ZNF705FA8MVS1 300 aaPredicted RBP12.9□□□□□ -0.34
TUBB3-211ENST00000556536 K7EIL1 84 aa12.9□□□□□ -0.34
TUBB3-211ENST00000556536 ICAM4Q14773 271 aa12.9□□□□□ -0.34
TUBB3-211ENST00000556536 Q9H3A6 140 aa12.9□□□□□ -0.34
TUBB3-211ENST00000556536 F6UB75 175 aa12.89□□□□□ -0.35
TUBB3-211ENST00000556536 M0R3E3 92 aa12.89□□□□□ -0.35
TUBB3-211ENST00000556536 IFNA7P01567 189 aa12.89□□□□□ -0.35
TUBB3-211ENST00000556536 UBE2G2P60604 165 aa12.89□□□□□ -0.35
TUBB3-211ENST00000556536 IFITM2Q01629 132 aa12.89□□□□□ -0.35
TUBB3-211ENST00000556536 ZNF738Q8NE65 137 aa12.89□□□□□ -0.35
TUBB3-211ENST00000556536 PCNPQ8WW12 178 aaKnown RBP12.89□□□□□ -0.35
TUBB3-211ENST00000556536 YTHDF2Q9Y5A9 579 aaKnown RBP12.89□□□□□ -0.35
TUBB3-211ENST00000556536 PRAC2D3DTV9 90 aa12.88□□□□□ -0.35
TUBB3-211ENST00000556536 BLOC1S1P78537 153 aa12.88□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 76.6 ms