RNA–Protein interactions for RNA: ENST00000555002.5

SYNE2-216, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 1 (best) BASIC

Gene SYNE2, Length 11,532 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-216ENST00000555002 TMEM258P61165 79 aa5.67□□□□□ -1.5
SYNE2-216ENST00000555002 ZNF525Q8N782 197 aa5.67□□□□□ -1.5
SYNE2-216ENST00000555002 IGHV3-38A0A0C4DH36 116 aa5.66□□□□□ -1.5
SYNE2-216ENST00000555002 SLC25A16P16260 332 aa5.66□□□□□ -1.5
SYNE2-216ENST00000555002 BCL6BQ8N143 479 aaPredicted RBP5.66□□□□□ -1.5
SYNE2-216ENST00000555002 GNB1LQ9BYB4 327 aa5.66□□□□□ -1.5
SYNE2-216ENST00000555002 ADAMTS9Q9P2N4 1935 aa5.66□□□□□ -1.5
SYNE2-216ENST00000555002 ADAMTS7Q9UKP4 1686 aa5.66□□□□□ -1.5
SYNE2-216ENST00000555002 IGHV4-28A0A0C4DH34 117 aa5.66□□□□□ -1.5
SYNE2-216ENST00000555002 APOC4P55056 127 aa5.66□□□□□ -1.5
SYNE2-216ENST00000555002 SPATA31B1PQ5VZV4 182 aa5.66□□□□□ -1.5
SYNE2-216ENST00000555002 CHCHD1Q96BP2 118 aaKnown RBP5.66□□□□□ -1.5
SYNE2-216ENST00000555002 TRBV25-1A0A075B6N4 114 aa5.66□□□□□ -1.5
SYNE2-216ENST00000555002 ERVH48-1M5A8F1 160 aa5.66□□□□□ -1.5
SYNE2-216ENST00000555002 GAS1P54826 345 aa5.66□□□□□ -1.5
SYNE2-216ENST00000555002 DEFB131AP59861 70 aa5.66□□□□□ -1.5
SYNE2-216ENST00000555002 ZNF672Q499Z4 452 aaPredicted RBP5.66□□□□□ -1.5
SYNE2-216ENST00000555002 ZNF837Q96EG3 531 aaPredicted RBP5.66□□□□□ -1.5
SYNE2-216ENST00000555002 IGF2BP2-AS1Q96M15 143 aa5.66□□□□□ -1.5
SYNE2-216ENST00000555002 WFDC6Q9BQY6 131 aa5.66□□□□□ -1.5
SYNE2-216ENST00000555002 DUTP33316 252 aaKnown RBP5.66□□□□□ -1.5
SYNE2-216ENST00000555002 CFHR1Q03591 330 aa5.66□□□□□ -1.5
SYNE2-216ENST00000555002 MORN5Q5VZ52 161 aa5.66□□□□□ -1.5
SYNE2-216ENST00000555002 ZNF497Q6ZNH5 498 aa5.66□□□□□ -1.5
SYNE2-216ENST00000555002 TRPM3Q9HCF6 1732 aaPredicted RBP5.66□□□□□ -1.5
SYNE2-216ENST00000555002 IGKV2D-24A0A075B6R9 120 aa5.66□□□□□ -1.5
SYNE2-216ENST00000555002 ZNF319Q9P2F9 582 aa5.66□□□□□ -1.5
SYNE2-216ENST00000555002 TRAV9-1A0A075B6T8 112 aa5.66□□□□□ -1.5
SYNE2-216ENST00000555002 SPINK8P0C7L1 97 aa5.66□□□□□ -1.5
SYNE2-216ENST00000555002 EFNA4P52798 201 aa5.66□□□□□ -1.5
SYNE2-216ENST00000555002 MORN2Q502X0 79 aa5.66□□□□□ -1.5
SYNE2-216ENST00000555002 ADAMTSL5Q6ZMM2 481 aa5.66□□□□□ -1.5
SYNE2-216ENST00000555002 C1QTNF5Q9BXJ0 243 aa5.66□□□□□ -1.5
SYNE2-216ENST00000555002 NPDC1Q9NQX5 325 aaPredicted RBP5.66□□□□□ -1.5
SYNE2-216ENST00000555002 MARF1Q9Y4F3 1742 aaKnown RBP5.66□□□□□ -1.5
SYNE2-216ENST00000555002 CD5P06127 495 aa5.66□□□□□ -1.5
SYNE2-216ENST00000555002 IGHG4P01861 327 aa5.66□□□□□ -1.5
SYNE2-216ENST00000555002 IL17RELQ6ZVW7 336 aa5.66□□□□□ -1.5
SYNE2-216ENST00000555002 SVIPQ8NHG7 77 aa5.66□□□□□ -1.5
SYNE2-216ENST00000555002 TINCRA0A1B0GVN0 87 aa5.66□□□□□ -1.5
SYNE2-216ENST00000555002 CD160O95971 181 aa5.66□□□□□ -1.5
SYNE2-216ENST00000555002 GUSBP1Q15486 140 aa5.66□□□□□ -1.5
SYNE2-216ENST00000555002 TSKUQ8WUA8 353 aa5.66□□□□□ -1.5
SYNE2-216ENST00000555002 Q96MF0 132 aa5.66□□□□□ -1.5
SYNE2-216ENST00000555002 VWA8A3KMH1 1905 aa5.65□□□□□ -1.5
SYNE2-216ENST00000555002 A0A0J9YY99 117 aa5.65□□□□□ -1.5
SYNE2-216ENST00000555002 LY6HO94772 140 aa5.65□□□□□ -1.5
SYNE2-216ENST00000555002 BRWD3Q6RI45 1802 aa5.65□□□□□ -1.5
SYNE2-216ENST00000555002 AZU1P20160 251 aa5.65□□□□□ -1.5
SYNE2-216ENST00000555002 ZNF138P52744 262 aa5.65□□□□□ -1.5
SYNE2-216ENST00000555002 TMEM243Q9BU79 118 aa5.65□□□□□ -1.5
SYNE2-216ENST00000555002 TIRAPP58753 221 aa5.65□□□□□ -1.5
SYNE2-216ENST00000555002 TMEM158Q8WZ71 300 aa5.65□□□□□ -1.5
SYNE2-216ENST00000555002 PCDH15Q96QU1 1955 aa5.65□□□□□ -1.5
SYNE2-216ENST00000555002 FOXF2Q12947 444 aa5.65□□□□□ -1.5
SYNE2-216ENST00000555002 ZFYVE26Q68DK2 2539 aa5.65□□□□□ -1.5
SYNE2-216ENST00000555002 C18orf12Q96KH6 178 aa5.65□□□□□ -1.5
SYNE2-216ENST00000555002 KIF26AQ9ULI4 1882 aaPredicted RBP5.65□□□□□ -1.51
SYNE2-216ENST00000555002 IGKV1D-13A0A0B4J2D9 117 aa5.65□□□□□ -1.51
SYNE2-216ENST00000555002 TMEM14DPA8MWL7 114 aa5.65□□□□□ -1.51
SYNE2-216ENST00000555002 IGKV1-13P0DP09 117 aa5.65□□□□□ -1.51
SYNE2-216ENST00000555002 CCL20P78556 96 aa5.65□□□□□ -1.51
SYNE2-216ENST00000555002 ADAMTSL3P82987 1691 aa5.65□□□□□ -1.51
SYNE2-216ENST00000555002 IGLV2-23P01705 113 aa5.65□□□□□ -1.51
SYNE2-216ENST00000555002 LY6G5BQ8NDX9 201 aa5.65□□□□□ -1.51
SYNE2-216ENST00000555002 RTBDNQ9BSG5 229 aaPredicted RBP5.65□□□□□ -1.51
SYNE2-216ENST00000555002 Q6ZQT7 251 aa5.65□□□□□ -1.51
SYNE2-216ENST00000555002 ID3Q02535 119 aa5.65□□□□□ -1.51
SYNE2-216ENST00000555002 KIR3DS1Q14943 382 aa5.65□□□□□ -1.51
SYNE2-216ENST00000555002 IGHV1-18A0A0C4DH31 117 aa5.64□□□□□ -1.51
SYNE2-216ENST00000555002 ANGP03950 147 aaKnown RBP5.64□□□□□ -1.51
SYNE2-216ENST00000555002 SPINK13Q1W4C9 94 aa5.64□□□□□ -1.51
SYNE2-216ENST00000555002 USMG5Q96IX5 58 aa5.64□□□□□ -1.51
SYNE2-216ENST00000555002 MPTX1A8MV57 137 aa5.64□□□□□ -1.51
SYNE2-216ENST00000555002 Q0VFX4 171 aa5.64□□□□□ -1.51
SYNE2-216ENST00000555002 IGHV1-3A0A0C4DH29 117 aa5.64□□□□□ -1.51
SYNE2-216ENST00000555002 EFNA2O43921 213 aa5.64□□□□□ -1.51
SYNE2-216ENST00000555002 PLSCR4Q9NRQ2 329 aa5.64□□□□□ -1.51
SYNE2-216ENST00000555002 TMEM242Q9NWH2 141 aa5.64□□□□□ -1.51
SYNE2-216ENST00000555002 YPEL1O60688 119 aa5.64□□□□□ -1.51
SYNE2-216ENST00000555002 EFNB3Q15768 340 aa5.64□□□□□ -1.51
SYNE2-216ENST00000555002 TMEM200BQ69YZ2 307 aa5.64□□□□□ -1.51
SYNE2-216ENST00000555002 YPEL2Q96QA6 119 aa5.64□□□□□ -1.51
SYNE2-216ENST00000555002 LINC01619G3V211 115 aa5.64□□□□□ -1.51
SYNE2-216ENST00000555002 TRACP01848 142 aa5.64□□□□□ -1.51
SYNE2-216ENST00000555002 C5orf64Q2M2E5 130 aa5.64□□□□□ -1.51
SYNE2-216ENST00000555002 OCC1Q8TAD7 63 aa5.64□□□□□ -1.51
SYNE2-216ENST00000555002 PIN1P1O15428 100 aa5.64□□□□□ -1.51
SYNE2-216ENST00000555002 UBE2E1P51965 193 aa5.64□□□□□ -1.51
SYNE2-216ENST00000555002 RHPN1-AS1Q9BWJ2 59 aa5.64□□□□□ -1.51
SYNE2-216ENST00000555002 RBM3P98179 157 aaKnown RBP5.64□□□□□ -1.51
SYNE2-216ENST00000555002 LTBP4Q8N2S1 1624 aa5.64□□□□□ -1.51
SYNE2-216ENST00000555002 ZNF124Q15973 351 aa5.64□□□□□ -1.51
SYNE2-216ENST00000555002 SMPXQ9UHP9 88 aa5.64□□□□□ -1.51
SYNE2-216ENST00000555002 RNASE2P10153 161 aaKnown RBP5.64□□□□□ -1.51
SYNE2-216ENST00000555002 ATP6V0BQ99437 205 aa5.64□□□□□ -1.51
SYNE2-216ENST00000555002 MCRIP2Q9BUT9 160 aaKnown RBP5.64□□□□□ -1.51
SYNE2-216ENST00000555002 PINLYPA6NC86 204 aa5.63□□□□□ -1.51
SYNE2-216ENST00000555002 GZMMP51124 257 aa5.63□□□□□ -1.51
SYNE2-216ENST00000555002 SLC25A48Q6ZT89 311 aaKnown RBP5.63□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 51.3 ms