RNA–Protein interactions for RNA: ENST00000554365.1

SPTLC2-202, Transcript of serine palmitoyltransferase long chain base subunit 2, humanhuman

TSL 2

Gene SPTLC2, Length 604 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC2-202ENST00000554365 RAB24Q969Q5 203 aa10.42□□□□□ -0.74
SPTLC2-202ENST00000554365 ZNF503Q96F45 646 aa10.42□□□□□ -0.74
SPTLC2-202ENST00000554365 RNF2Q99496 336 aa10.42□□□□□ -0.74
SPTLC2-202ENST00000554365 SLC25A2Q9BXI2 301 aa10.42□□□□□ -0.74
SPTLC2-202ENST00000554365 IGHV3OR16-13A0A075B7E8 117 aa10.41□□□□□ -0.74
SPTLC2-202ENST00000554365 IGHV3-74A0A0B4J1X5 117 aa10.41□□□□□ -0.74
SPTLC2-202ENST00000554365 IGHV3-66A0A0C4DH42 116 aa10.41□□□□□ -0.74
SPTLC2-202ENST00000554365 CTXND1A0A1B0GTU2 59 aa10.41□□□□□ -0.74
SPTLC2-202ENST00000554365 CXorf65A6NEN9 183 aa10.41□□□□□ -0.74
SPTLC2-202ENST00000554365 CHEK1O14757 476 aa10.41□□□□□ -0.74
SPTLC2-202ENST00000554365 C16orf54Q6UWD8 224 aa10.41□□□□□ -0.74
SPTLC2-202ENST00000554365 RNF141Q8WVD5 230 aa10.41□□□□□ -0.74
SPTLC2-202ENST00000554365 GLMPQ8WWB7 406 aa10.41□□□□□ -0.74
SPTLC2-202ENST00000554365 MBD3L1Q8WWY6 194 aa10.41□□□□□ -0.74
SPTLC2-202ENST00000554365 ACTR3CQ9C0K3 210 aaPredicted RBP10.41□□□□□ -0.74
SPTLC2-202ENST00000554365 UBQLN2Q9UHD9 624 aa10.41□□□□□ -0.74
SPTLC2-202ENST00000554365 RGS13O14921 159 aa10.4□□□□□ -0.74
SPTLC2-202ENST00000554365 HMGB3O15347 200 aaKnown RBP10.4□□□□□ -0.74
SPTLC2-202ENST00000554365 STAG3L2P0CL84 134 aa10.4□□□□□ -0.74
SPTLC2-202ENST00000554365 STAG3L3P0CL85 134 aa10.4□□□□□ -0.74
SPTLC2-202ENST00000554365 CBLN1P23435 193 aa10.4□□□□□ -0.74
SPTLC2-202ENST00000554365 ZNF767PQ75MW2 155 aa10.4□□□□□ -0.74
SPTLC2-202ENST00000554365 C17orf77Q96MU5 243 aa10.4□□□□□ -0.74
SPTLC2-202ENST00000554365 OVOL2Q9BRP0 275 aa10.4□□□□□ -0.74
SPTLC2-202ENST00000554365 RHPN1-AS1Q9BWJ2 59 aa10.4□□□□□ -0.74
SPTLC2-202ENST00000554365 KRTAP17-1Q9BYP8 105 aa10.4□□□□□ -0.74
SPTLC2-202ENST00000554365 A0A1W2PPV4 95 aa10.39□□□□□ -0.75
SPTLC2-202ENST00000554365 ZNF705EA8MWA4 302 aaPredicted RBP10.39□□□□□ -0.75
SPTLC2-202ENST00000554365 C1orf194Q5T5A4 169 aa10.39□□□□□ -0.75
SPTLC2-202ENST00000554365 TMEM61Q8N0U2 210 aa10.39□□□□□ -0.75
SPTLC2-202ENST00000554365 PCNPQ8WW12 178 aaKnown RBP10.39□□□□□ -0.75
SPTLC2-202ENST00000554365 MARC2Q969Z3 335 aa10.39□□□□□ -0.75
SPTLC2-202ENST00000554365 MLXQ9UH92 298 aa10.39□□□□□ -0.75
SPTLC2-202ENST00000554365 LOC102724200A0A096LPH7 203 aaPredicted RBP10.38□□□□□ -0.75
SPTLC2-202ENST00000554365 MAP1LC3B2A6NCE7 125 aa10.38□□□□□ -0.75
SPTLC2-202ENST00000554365 NMBP08949 121 aa10.38□□□□□ -0.75
SPTLC2-202ENST00000554365 PYYP10082 97 aa10.38□□□□□ -0.75
SPTLC2-202ENST00000554365 FGF8P55075 233 aaPredicted RBP10.38□□□□□ -0.75
SPTLC2-202ENST00000554365 FAM90A2PQ658T7 463 aa10.38□□□□□ -0.75
SPTLC2-202ENST00000554365 LCN15Q6UWW0 184 aa10.38□□□□□ -0.75
SPTLC2-202ENST00000554365 LYPD6BQ8NI32 183 aa10.38□□□□□ -0.75
SPTLC2-202ENST00000554365 SAT2Q96F10 170 aaPredicted RBP10.38□□□□□ -0.75
SPTLC2-202ENST00000554365 MAP1LC3BQ9GZQ8 125 aa10.38□□□□□ -0.75
SPTLC2-202ENST00000554365 TMEM14CQ9P0S9 112 aa10.38□□□□□ -0.75
SPTLC2-202ENST00000554365 TRAV1-1A0A0B4J248 108 aa10.37□□□□□ -0.75
SPTLC2-202ENST00000554365 A0A1W2PS18 150 aa10.37□□□□□ -0.75
SPTLC2-202ENST00000554365 H2AFB1P0C5Y9 115 aa10.37□□□□□ -0.75
SPTLC2-202ENST00000554365 ARL14EPLP0DKL9 152 aa10.37□□□□□ -0.75
SPTLC2-202ENST00000554365 IGLC2P0DOY2 106 aa10.37□□□□□ -0.75
SPTLC2-202ENST00000554365 CCL20P78556 96 aa10.37□□□□□ -0.75
SPTLC2-202ENST00000554365 KHDC3LQ587J8 217 aa10.37□□□□□ -0.75
SPTLC2-202ENST00000554365 S100A7AQ86SG5 101 aa10.37□□□□□ -0.75
SPTLC2-202ENST00000554365 SUN5Q8TC36 379 aa10.37□□□□□ -0.75
SPTLC2-202ENST00000554365 FXYD5Q96DB9 178 aa10.37□□□□□ -0.75
SPTLC2-202ENST00000554365 FRAS1Q86XX4 4008 aa10.36□□□□□ -0.75
SPTLC2-202ENST00000554365 A0A0J9YWU9 116 aa10.36□□□□□ -0.75
SPTLC2-202ENST00000554365 NUPR2A6NF83 97 aa10.36□□□□□ -0.75
SPTLC2-202ENST00000554365 H3BQ15 152 aa10.36□□□□□ -0.75
SPTLC2-202ENST00000554365 GCHFRP30047 84 aa10.36□□□□□ -0.75
SPTLC2-202ENST00000554365 S100A7P31151 101 aa10.36□□□□□ -0.75
SPTLC2-202ENST00000554365 TAS2R45P59539 299 aa10.36□□□□□ -0.75
SPTLC2-202ENST00000554365 BLOC1S1P78537 153 aa10.36□□□□□ -0.75
SPTLC2-202ENST00000554365 PQLC2Q6ZP29 291 aa10.36□□□□□ -0.75
SPTLC2-202ENST00000554365 OR8I2Q8N0Y5 310 aa10.36□□□□□ -0.75
SPTLC2-202ENST00000554365 LRRC20Q8TCA0 184 aa10.36□□□□□ -0.75
SPTLC2-202ENST00000554365 SFT2D1Q8WV19 159 aa10.36□□□□□ -0.75
SPTLC2-202ENST00000554365 NARS2Q96I59 477 aaKnown RBP10.36□□□□□ -0.75
SPTLC2-202ENST00000554365 PAXXQ9BUH6 204 aa10.36□□□□□ -0.75
SPTLC2-202ENST00000554365 OR51M1Q9H341 326 aa10.36□□□□□ -0.75
SPTLC2-202ENST00000554365 TMPRSS5Q9H3S3 457 aa10.36□□□□□ -0.75
SPTLC2-202ENST00000554365 PFDN2Q9UHV9 154 aa10.36□□□□□ -0.75
SPTLC2-202ENST00000554365 A0A087X0K7 114 aa10.35□□□□□ -0.75
SPTLC2-202ENST00000554365 A0A1B0GV50 99 aa10.35□□□□□ -0.75
SPTLC2-202ENST00000554365 OR7C2O60412 319 aa10.35□□□□□ -0.75
SPTLC2-202ENST00000554365 CXorf1O96002 111 aa10.35□□□□□ -0.75
SPTLC2-202ENST00000554365 OR10J4P0C629 311 aa10.35□□□□□ -0.75
SPTLC2-202ENST00000554365 RPL7P18124 248 aaKnown RBP10.35□□□□□ -0.75
SPTLC2-202ENST00000554365 SIGLEC15Q6ZMC9 328 aa10.35□□□□□ -0.75
SPTLC2-202ENST00000554365 TCF24Q7RTU0 167 aa10.35□□□□□ -0.75
SPTLC2-202ENST00000554365 BPIFA4PQ86YQ2 179 aa10.35□□□□□ -0.75
SPTLC2-202ENST00000554365 GRAMD2BQ96HH9 432 aa10.35□□□□□ -0.75
SPTLC2-202ENST00000554365 GPR82Q96P67 336 aa10.35□□□□□ -0.75
SPTLC2-202ENST00000554365 TMEM231Q9H6L2 316 aa10.35□□□□□ -0.75
SPTLC2-202ENST00000554365 ZNF586Q9NXT0 402 aa10.35□□□□□ -0.75
SPTLC2-202ENST00000554365 SNRPCP09234 159 aaKnown RBP10.34□□□□□ -0.75
SPTLC2-202ENST00000554365 BMI1P35226 326 aa10.34□□□□□ -0.75
SPTLC2-202ENST00000554365 CLLU1Q5K131 121 aa10.34□□□□□ -0.75
SPTLC2-202ENST00000554365 CEMP1Q6PRD7 247 aaPredicted RBP10.34□□□□□ -0.75
SPTLC2-202ENST00000554365 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa10.34□□□□□ -0.75
SPTLC2-202ENST00000554365 RBPMS2Q6ZRY4 209 aaKnown RBP10.34□□□□□ -0.75
SPTLC2-202ENST00000554365 STXBP6Q8NFX7 210 aa10.34□□□□□ -0.75
SPTLC2-202ENST00000554365 RNF24Q9Y225 148 aa10.34□□□□□ -0.75
SPTLC2-202ENST00000554365 H3BTX0 84 aa10.33□□□□□ -0.76
SPTLC2-202ENST00000554365 SOCS3O14543 225 aa10.33□□□□□ -0.76
SPTLC2-202ENST00000554365 NDUFB4O95168 129 aa10.33□□□□□ -0.76
SPTLC2-202ENST00000554365 HIST1H1EP10412 219 aaKnown RBP10.33□□□□□ -0.76
SPTLC2-202ENST00000554365 GALR1P47211 349 aa10.33□□□□□ -0.76
SPTLC2-202ENST00000554365 APOC4P55056 127 aa10.33□□□□□ -0.76
SPTLC2-202ENST00000554365 UBE2L3P68036 154 aaKnown RBP10.33□□□□□ -0.76
SPTLC2-202ENST00000554365 DEFB135Q30KP9 77 aa10.33□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms