RNA–Protein interactions for RNA: ENST00000553704.2

LINC-ROR-201, Transcript of long intergenic non-protein coding RNA, regulator of reprogramming, humanhuman

TSL 1 (best) BASIC

Gene LINC-ROR, Length 2,603 nt, Biotype lincRNA, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC-ROR-201ENST00000553704 C8orf49Q96NF6 230 aa5.45□□□□□ -1.54
LINC-ROR-201ENST00000553704 PMCHL2Q9BQD1 86 aa5.45□□□□□ -1.54
LINC-ROR-201ENST00000553704 H0Y8G0 127 aa5.45□□□□□ -1.54
LINC-ROR-201ENST00000553704 HAX1O00165 279 aa5.45□□□□□ -1.54
LINC-ROR-201ENST00000553704 CRXO43186 299 aaPredicted RBP5.45□□□□□ -1.54
LINC-ROR-201ENST00000553704 TCF21O43680 179 aa5.45□□□□□ -1.54
LINC-ROR-201ENST00000553704 LEPROTL1O95214 131 aa5.45□□□□□ -1.54
LINC-ROR-201ENST00000553704 LINC00614P0C842 121 aa5.45□□□□□ -1.54
LINC-ROR-201ENST00000553704 NDPQ00604 133 aa5.45□□□□□ -1.54
LINC-ROR-201ENST00000553704 TMEM75Q8N9X5 138 aa5.45□□□□□ -1.54
LINC-ROR-201ENST00000553704 CHCHD1Q96BP2 118 aaKnown RBP5.45□□□□□ -1.54
LINC-ROR-201ENST00000553704 RNF125Q96EQ8 232 aa5.45□□□□□ -1.54
LINC-ROR-201ENST00000553704 PTPRQQ9UMZ3 2332 aa5.45□□□□□ -1.54
LINC-ROR-201ENST00000553704 MRPS16Q9Y3D3 137 aaKnown RBP5.45□□□□□ -1.54
LINC-ROR-201ENST00000553704 TIMM8BQ9Y5J9 83 aaPredicted RBP5.45□□□□□ -1.54
LINC-ROR-201ENST00000553704 F8W735 103 aaPredicted RBP5.44□□□□□ -1.54
LINC-ROR-201ENST00000553704 GOSR1O95249 250 aa5.44□□□□□ -1.54
LINC-ROR-201ENST00000553704 ARF6P62330 175 aa5.44□□□□□ -1.54
LINC-ROR-201ENST00000553704 FOXE3Q13461 319 aa5.44□□□□□ -1.54
LINC-ROR-201ENST00000553704 ERASQ7Z444 233 aa5.44□□□□□ -1.54
LINC-ROR-201ENST00000553704 TPPP3Q9BW30 176 aa5.44□□□□□ -1.54
LINC-ROR-201ENST00000553704 SCNM1Q9BWG6 230 aa5.44□□□□□ -1.54
LINC-ROR-201ENST00000553704 PSG8Q9UQ74 426 aa5.44□□□□□ -1.54
LINC-ROR-201ENST00000553704 FAM231BA6NCW3 169 aa5.44□□□□□ -1.54
LINC-ROR-201ENST00000553704 NBR2O15453 112 aa5.44□□□□□ -1.54
LINC-ROR-201ENST00000553704 IGHV3-23P01764 117 aa5.44□□□□□ -1.54
LINC-ROR-201ENST00000553704 FAM106CPP0CH98 169 aa5.44□□□□□ -1.54
LINC-ROR-201ENST00000553704 HTR1DP28221 377 aa5.44□□□□□ -1.54
LINC-ROR-201ENST00000553704 FCGR2BP31994 310 aaPredicted RBP5.44□□□□□ -1.54
LINC-ROR-201ENST00000553704 PSG3Q16557 428 aa5.44□□□□□ -1.54
LINC-ROR-201ENST00000553704 FAM106AQ4KMX7 169 aa5.44□□□□□ -1.54
LINC-ROR-201ENST00000553704 BPIFA4PQ86YQ2 179 aa5.44□□□□□ -1.54
LINC-ROR-201ENST00000553704 ZNF414Q96IQ9 312 aa5.44□□□□□ -1.54
LINC-ROR-201ENST00000553704 FANCD2OSQ96PS1 177 aa5.44□□□□□ -1.54
LINC-ROR-201ENST00000553704 NDFIP1Q9BT67 221 aa5.44□□□□□ -1.54
LINC-ROR-201ENST00000553704 TMSB15BA0A087X1C1 80 aa5.44□□□□□ -1.54
LINC-ROR-201ENST00000553704 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP5.44□□□□□ -1.54
LINC-ROR-201ENST00000553704 MUC21A0A0G2JKD1 596 aa5.44□□□□□ -1.54
LINC-ROR-201ENST00000553704 TRBV6-1A0A0K0K1D8 114 aa5.44□□□□□ -1.54
LINC-ROR-201ENST00000553704 MUC21A0A140T8X8 626 aa5.44□□□□□ -1.54
LINC-ROR-201ENST00000553704 A0A1B0GUT8 65 aa5.44□□□□□ -1.54
LINC-ROR-201ENST00000553704 CCL25O15444 150 aa5.44□□□□□ -1.54
LINC-ROR-201ENST00000553704 NCR2O95944 276 aa5.44□□□□□ -1.54
LINC-ROR-201ENST00000553704 LOXL1Q08397 574 aaPredicted RBP5.44□□□□□ -1.54
LINC-ROR-201ENST00000553704 MUC21Q5SSG8 566 aa5.44□□□□□ -1.54
LINC-ROR-201ENST00000553704 DYNAPQ8N1N2 210 aa5.44□□□□□ -1.54
LINC-ROR-201ENST00000553704 LY6G5BQ8NDX9 201 aa5.44□□□□□ -1.54
LINC-ROR-201ENST00000553704 C1RLQ9NZP8 487 aa5.44□□□□□ -1.54
LINC-ROR-201ENST00000553704 WI2-2373I1.2A0A1W2PRP0 233 aa5.43□□□□□ -1.54
LINC-ROR-201ENST00000553704 C20orf202A1L168 122 aa5.43□□□□□ -1.54
LINC-ROR-201ENST00000553704 NDUFA3O95167 84 aa5.43□□□□□ -1.54
LINC-ROR-201ENST00000553704 LIPFP07098 398 aa5.43□□□□□ -1.54
LINC-ROR-201ENST00000553704 OXLD1Q5BKU9 147 aa5.43□□□□□ -1.54
LINC-ROR-201ENST00000553704 NEU4Q8WWR8 484 aaPredicted RBP5.43□□□□□ -1.54
LINC-ROR-201ENST00000553704 VKORC1Q9BQB6 163 aa5.43□□□□□ -1.54
LINC-ROR-201ENST00000553704 IGLV11-55A0A075B6I3 123 aa5.43□□□□□ -1.54
LINC-ROR-201ENST00000553704 IGHV3OR16-8A0A075B7F1 116 aa5.43□□□□□ -1.54
LINC-ROR-201ENST00000553704 IGKV2-40A0A087WW87 121 aaPredicted RBP5.43□□□□□ -1.54
LINC-ROR-201ENST00000553704 A0A096LNJ9 63 aa5.43□□□□□ -1.54
LINC-ROR-201ENST00000553704 TMEM213A2RRL7 107 aa5.43□□□□□ -1.54
LINC-ROR-201ENST00000553704 IGKV2D-40P01614 121 aaPredicted RBP5.43□□□□□ -1.54
LINC-ROR-201ENST00000553704 FOXC1Q12948 553 aa5.43□□□□□ -1.54
LINC-ROR-201ENST00000553704 HES1Q14469 280 aa5.43□□□□□ -1.54
LINC-ROR-201ENST00000553704 MPV17L2Q567V2 206 aa5.43□□□□□ -1.54
LINC-ROR-201ENST00000553704 IGFL4Q6B9Z1 124 aa5.43□□□□□ -1.54
LINC-ROR-201ENST00000553704 COX11Q9Y6N1 276 aa5.43□□□□□ -1.54
LINC-ROR-201ENST00000553704 IGF2RP11717 2491 aa5.42□□□□□ -1.54
LINC-ROR-201ENST00000553704 NBASA2RRP1 2371 aa5.42□□□□□ -1.54
LINC-ROR-201ENST00000553704 ODF3BA8MYP8 253 aa5.42□□□□□ -1.54
LINC-ROR-201ENST00000553704 GNG7O60262 68 aa5.42□□□□□ -1.54
LINC-ROR-201ENST00000553704 HLA-DMBP28068 263 aa5.42□□□□□ -1.54
LINC-ROR-201ENST00000553704 C5orf64Q2M2E5 130 aa5.42□□□□□ -1.54
LINC-ROR-201ENST00000553704 FAM162BQ5T6X4 162 aa5.42□□□□□ -1.54
LINC-ROR-201ENST00000553704 GATD1Q8NB37 220 aa5.42□□□□□ -1.54
LINC-ROR-201ENST00000553704 OR11H6Q8NGC7 330 aa5.42□□□□□ -1.54
LINC-ROR-201ENST00000553704 Q8TAT8 98 aa5.42□□□□□ -1.54
LINC-ROR-201ENST00000553704 ORAOV1Q8WV07 137 aa5.42□□□□□ -1.54
LINC-ROR-201ENST00000553704 SRSF8Q9BRL6 282 aaKnown RBP5.42□□□□□ -1.54
LINC-ROR-201ENST00000553704 ST20Q9HBF5 79 aa5.42□□□□□ -1.54
LINC-ROR-201ENST00000553704 SCRT2Q9NQ03 307 aa5.42□□□□□ -1.54
LINC-ROR-201ENST00000553704 DPM3Q9P2X0 92 aa5.42□□□□□ -1.54
LINC-ROR-201ENST00000553704 ATRXP46100 2492 aa5.42□□□□□ -1.54
LINC-ROR-201ENST00000553704 SH2D1AO60880 128 aa5.42□□□□□ -1.54
LINC-ROR-201ENST00000553704 FXYD7P58549 80 aa5.42□□□□□ -1.54
LINC-ROR-201ENST00000553704 PIP4P2Q8N4L2 257 aa5.42□□□□□ -1.54
LINC-ROR-201ENST00000553704 NPBQ8NG41 125 aa5.42□□□□□ -1.54
LINC-ROR-201ENST00000553704 RNF5Q99942 180 aa5.42□□□□□ -1.54
LINC-ROR-201ENST00000553704 SPTA1P02549 2419 aa5.41□□□□□ -1.54
LINC-ROR-201ENST00000553704 IGHV3-35A0A0C4DH35 117 aa5.41□□□□□ -1.54
LINC-ROR-201ENST00000553704 OR2T8A6NH00 312 aa5.41□□□□□ -1.54
LINC-ROR-201ENST00000553704 D6R8Y8 96 aa5.41□□□□□ -1.54
LINC-ROR-201ENST00000553704 K7ENP7 123 aa5.41□□□□□ -1.54
LINC-ROR-201ENST00000553704 IFI27P40305 119 aaPredicted RBP5.41□□□□□ -1.54
LINC-ROR-201ENST00000553704 ZNF80P51504 273 aaPredicted RBP5.41□□□□□ -1.54
LINC-ROR-201ENST00000553704 RIGQ13278 110 aa5.41□□□□□ -1.54
LINC-ROR-201ENST00000553704 LINC01545Q5VT33 79 aa5.41□□□□□ -1.54
LINC-ROR-201ENST00000553704 LYZL1Q6UWQ5 148 aa5.41□□□□□ -1.54
LINC-ROR-201ENST00000553704 AMN1Q8IY45 258 aa5.41□□□□□ -1.54
LINC-ROR-201ENST00000553704 ARPC1AQ92747 370 aa5.41□□□□□ -1.54
LINC-ROR-201ENST00000553704 MAP1LC3CQ9BXW4 147 aa5.41□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 44.4 ms