RNA–Protein interactions for RNA: ENST00000551111.1

PRPF40B-212, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

TSL 5

Gene PRPF40B, Length 1,061 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-212ENST00000551111 CCDC190Q86UF4 302 aa8.06□□□□□ -1.12
PRPF40B-212ENST00000551111 C15orf53Q8NAA6 179 aa8.06□□□□□ -1.12
PRPF40B-212ENST00000551111 ZBTB8BQ8NAP8 495 aaPredicted RBP8.06□□□□□ -1.12
PRPF40B-212ENST00000551111 RNF141Q8WVD5 230 aa8.06□□□□□ -1.12
PRPF40B-212ENST00000551111 GPR82Q96P67 336 aa8.06□□□□□ -1.12
PRPF40B-212ENST00000551111 ATG101Q9BSB4 218 aa8.06□□□□□ -1.12
PRPF40B-212ENST00000551111 KRTAP1-5Q9BYS1 174 aa8.06□□□□□ -1.12
PRPF40B-212ENST00000551111 ARL6Q9H0F7 186 aa8.06□□□□□ -1.12
PRPF40B-212ENST00000551111 A0A087X0K7 114 aa8.05□□□□□ -1.12
PRPF40B-212ENST00000551111 LINC00854A0A1B0GVQ3 168 aa8.05□□□□□ -1.12
PRPF40B-212ENST00000551111 AP3S2P59780 193 aa8.05□□□□□ -1.12
PRPF40B-212ENST00000551111 UBE2MP61081 183 aaKnown RBP8.05□□□□□ -1.12
PRPF40B-212ENST00000551111 RAP2BP61225 183 aa8.05□□□□□ -1.12
PRPF40B-212ENST00000551111 SOHLH1Q5JUK2 328 aa8.05□□□□□ -1.12
PRPF40B-212ENST00000551111 TMEM14EPQ6UXP3 125 aa8.05□□□□□ -1.12
PRPF40B-212ENST00000551111 SMIM8Q96KF7 97 aa8.05□□□□□ -1.12
PRPF40B-212ENST00000551111 SRRQ9GZT4 340 aa8.05□□□□□ -1.12
PRPF40B-212ENST00000551111 NOP10Q9NPE3 64 aaKnown RBP8.05□□□□□ -1.12
PRPF40B-212ENST00000551111 CBY3A6NI87 242 aa8.04□□□□□ -1.12
PRPF40B-212ENST00000551111 C16orf90A8MZG2 172 aa8.04□□□□□ -1.12
PRPF40B-212ENST00000551111 SLC17A3O00476 420 aa8.04□□□□□ -1.12
PRPF40B-212ENST00000551111 RPL7P18124 248 aaKnown RBP8.04□□□□□ -1.12
PRPF40B-212ENST00000551111 ANXA7P20073 488 aaKnown RBP8.04□□□□□ -1.12
PRPF40B-212ENST00000551111 BTCP35070 178 aa8.04□□□□□ -1.12
PRPF40B-212ENST00000551111 RNASE8Q8TDE3 154 aaKnown RBP8.04□□□□□ -1.12
PRPF40B-212ENST00000551111 RPUSD4Q96CM3 377 aaKnown RBP8.04□□□□□ -1.12
PRPF40B-212ENST00000551111 SDHCQ99643 169 aaPredicted RBP8.04□□□□□ -1.12
PRPF40B-212ENST00000551111 ARV1Q9H2C2 271 aa8.04□□□□□ -1.12
PRPF40B-212ENST00000551111 RCL1Q9Y2P8 373 aaKnown RBP8.04□□□□□ -1.12
PRPF40B-212ENST00000551111 PIGBOS1A0A0B4J2F0 54 aa8.03□□□□□ -1.12
PRPF40B-212ENST00000551111 NOL3O60936 208 aaKnown RBP8.03□□□□□ -1.12
PRPF40B-212ENST00000551111 NDUFB6O95139 128 aa8.03□□□□□ -1.12
PRPF40B-212ENST00000551111 ATP5G1P05496 136 aa8.03□□□□□ -1.12
PRPF40B-212ENST00000551111 OR4E1P0C645 316 aa8.03□□□□□ -1.12
PRPF40B-212ENST00000551111 HOXA5P20719 270 aa8.03□□□□□ -1.12
PRPF40B-212ENST00000551111 ATP5G3P48201 142 aa8.03□□□□□ -1.12
PRPF40B-212ENST00000551111 TAS2R60P59551 318 aa8.03□□□□□ -1.12
PRPF40B-212ENST00000551111 DLK1P80370 383 aa8.03□□□□□ -1.12
PRPF40B-212ENST00000551111 C6orf223Q8N319 242 aa8.03□□□□□ -1.12
PRPF40B-212ENST00000551111 TMEM37Q8WXS4 190 aa8.03□□□□□ -1.12
PRPF40B-212ENST00000551111 ZNF331Q9NQX6 463 aaPredicted RBP8.03□□□□□ -1.12
PRPF40B-212ENST00000551111 TRAV5A0A0B4J249 113 aa8.02□□□□□ -1.13
PRPF40B-212ENST00000551111 A0A0J9YY99 117 aa8.02□□□□□ -1.13
PRPF40B-212ENST00000551111 H3BQ15 152 aa8.02□□□□□ -1.13
PRPF40B-212ENST00000551111 J3KRW8 73 aa8.02□□□□□ -1.13
PRPF40B-212ENST00000551111 AGPAT2O15120 278 aa8.02□□□□□ -1.13
PRPF40B-212ENST00000551111 SCGB1D2O95969 90 aa8.02□□□□□ -1.13
PRPF40B-212ENST00000551111 CDKN1BP46527 198 aa8.02□□□□□ -1.13
PRPF40B-212ENST00000551111 FAM3BP58499 235 aaPredicted RBP8.02□□□□□ -1.13
PRPF40B-212ENST00000551111 B2MP61769 119 aa8.02□□□□□ -1.13
PRPF40B-212ENST00000551111 SELENOTP62341 195 aa8.02□□□□□ -1.13
PRPF40B-212ENST00000551111 SSX7Q7RTT5 188 aa8.02□□□□□ -1.13
PRPF40B-212ENST00000551111 LINC00305Q7Z4B0 112 aa8.02□□□□□ -1.13
PRPF40B-212ENST00000551111 TMEM256Q8N2U0 113 aa8.02□□□□□ -1.13
PRPF40B-212ENST00000551111 LRRC20Q8TCA0 184 aa8.02□□□□□ -1.13
PRPF40B-212ENST00000551111 C16orf74Q96GX8 76 aa8.02□□□□□ -1.13
PRPF40B-212ENST00000551111 MGST2Q99735 147 aa8.02□□□□□ -1.13
PRPF40B-212ENST00000551111 RBM38Q9H0Z9 239 aaKnown RBP8.02□□□□□ -1.13
PRPF40B-212ENST00000551111 NPVFQ9HCQ7 196 aa8.02□□□□□ -1.13
PRPF40B-212ENST00000551111 TIMM8BQ9Y5J9 83 aaPredicted RBP8.02□□□□□ -1.13
PRPF40B-212ENST00000551111 C7orf66A4D0T2 115 aa8.01□□□□□ -1.13
PRPF40B-212ENST00000551111 CCDC160A6NGH7 325 aa8.01□□□□□ -1.13
PRPF40B-212ENST00000551111 K7EPK0 472 aa8.01□□□□□ -1.13
PRPF40B-212ENST00000551111 CCSO14618 274 aa8.01□□□□□ -1.13
PRPF40B-212ENST00000551111 MBPP02686 304 aaPredicted RBP8.01□□□□□ -1.13
PRPF40B-212ENST00000551111 S100A5P33763 92 aa8.01□□□□□ -1.13
PRPF40B-212ENST00000551111 OR5I1Q13606 314 aa8.01□□□□□ -1.13
PRPF40B-212ENST00000551111 OPCMLQ14982 345 aa8.01□□□□□ -1.13
PRPF40B-212ENST00000551111 IAH1Q2TAA2 248 aaPredicted RBP8.01□□□□□ -1.13
PRPF40B-212ENST00000551111 GFI1BQ5VTD9 330 aa8.01□□□□□ -1.13
PRPF40B-212ENST00000551111 TEPPQ6URK8 271 aa8.01□□□□□ -1.13
PRPF40B-212ENST00000551111 LINC00612Q8N6U2 182 aa8.01□□□□□ -1.13
PRPF40B-212ENST00000551111 DEDD2Q8WXF8 326 aa8.01□□□□□ -1.13
PRPF40B-212ENST00000551111 PPP1R14DQ9NXH3 145 aa8.01□□□□□ -1.13
PRPF40B-212ENST00000551111 GSKIPQ9P0R6 139 aa8.01□□□□□ -1.13
PRPF40B-212ENST00000551111 TRAV26-1A0A087WT03 109 aa8□□□□□ -1.13
PRPF40B-212ENST00000551111 GAGE12BA1L429 117 aa8□□□□□ -1.13
PRPF40B-212ENST00000551111 ZNF701M0R085 212 aaPredicted RBP8□□□□□ -1.13
PRPF40B-212ENST00000551111 GAGE7O76087 117 aa8□□□□□ -1.13
PRPF40B-212ENST00000551111 GAGE12FP0CL80 117 aa8□□□□□ -1.13
PRPF40B-212ENST00000551111 GAGE12GP0CL81 117 aa8□□□□□ -1.13
PRPF40B-212ENST00000551111 GAGE12IP0CL82 117 aa8□□□□□ -1.13
PRPF40B-212ENST00000551111 CT45A10P0DMU9 189 aa8□□□□□ -1.13
PRPF40B-212ENST00000551111 CCL18P55774 89 aa8□□□□□ -1.13
PRPF40B-212ENST00000551111 KRTAP10-2P60368 255 aa8□□□□□ -1.13
PRPF40B-212ENST00000551111 ESRGQ1W209 222 aa8□□□□□ -1.13
PRPF40B-212ENST00000551111 OR10P1Q8NGE3 313 aa8□□□□□ -1.13
PRPF40B-212ENST00000551111 TMEM263Q8WUH6 116 aaKnown RBP8□□□□□ -1.13
PRPF40B-212ENST00000551111 SAT2Q96F10 170 aaPredicted RBP8□□□□□ -1.13
PRPF40B-212ENST00000551111 Q9H8V8 135 aa8□□□□□ -1.13
PRPF40B-212ENST00000551111 TRAV12-3A0A0B4J271 114 aa7.99□□□□□ -1.13
PRPF40B-212ENST00000551111 FNDC10F2Z333 226 aa7.99□□□□□ -1.13
PRPF40B-212ENST00000551111 H7BYZ3 331 aa7.99□□□□□ -1.13
PRPF40B-212ENST00000551111 GOSR2O14653 212 aa7.99□□□□□ -1.13
PRPF40B-212ENST00000551111 TSC22D2O75157 780 aa7.99□□□□□ -1.13
PRPF40B-212ENST00000551111 CDK2AP2O75956 126 aa7.99□□□□□ -1.13
PRPF40B-212ENST00000551111 IGLC2P0DOY2 106 aa7.99□□□□□ -1.13
PRPF40B-212ENST00000551111 S100A7P31151 101 aa7.99□□□□□ -1.13
PRPF40B-212ENST00000551111 CLINT1Q14677 625 aa7.99□□□□□ -1.13
PRPF40B-212ENST00000551111 C4orf46Q504U0 113 aa7.99□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 73.4 ms