RNA–Protein interactions for RNA: ENST00000550893.2

SCAF11-214, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 2

Gene SCAF11, Length 507 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-214ENST00000550893 KNCNA6PVL3 124 aa3.45□□□□□ -1.86
SCAF11-214ENST00000550893 ZNF705EA8MWA4 302 aaPredicted RBP3.45□□□□□ -1.86
SCAF11-214ENST00000550893 DISC1C4P0D8 188 aa3.45□□□□□ -1.86
SCAF11-214ENST00000550893 IFNA6P05013 189 aa3.45□□□□□ -1.86
SCAF11-214ENST00000550893 SULT1A3P0DMM9 295 aa3.45□□□□□ -1.86
SCAF11-214ENST00000550893 SULT1A4P0DMN0 295 aa3.45□□□□□ -1.86
SCAF11-214ENST00000550893 IAPPP10997 89 aa3.45□□□□□ -1.86
SCAF11-214ENST00000550893 VPREB1P12018 145 aa3.45□□□□□ -1.86
SCAF11-214ENST00000550893 AKR1C4P17516 323 aa3.45□□□□□ -1.86
SCAF11-214ENST00000550893 GATA2P23769 480 aaPredicted RBP3.45□□□□□ -1.86
SCAF11-214ENST00000550893 OPRK1P41145 380 aa3.45□□□□□ -1.86
SCAF11-214ENST00000550893 HTR2BP41595 481 aa3.45□□□□□ -1.86
SCAF11-214ENST00000550893 YPEL3P61236 119 aaPredicted RBP3.45□□□□□ -1.86
SCAF11-214ENST00000550893 DHRS2Q13268 280 aa3.45□□□□□ -1.86
SCAF11-214ENST00000550893 SMCO1Q147U7 214 aa3.45□□□□□ -1.86
SCAF11-214ENST00000550893 AMTNQ6UX39 209 aa3.45□□□□□ -1.86
SCAF11-214ENST00000550893 KIR2DL5AQ8N109 375 aa3.45□□□□□ -1.86
SCAF11-214ENST00000550893 KIR2DL5BQ8NHK3 375 aa3.45□□□□□ -1.86
SCAF11-214ENST00000550893 RNASEH2CQ8TDP1 164 aaKnown RBP3.45□□□□□ -1.86
SCAF11-214ENST00000550893 DTD1Q8TEA8 209 aa3.45□□□□□ -1.86
SCAF11-214ENST00000550893 C15orf40Q8WUR7 153 aa3.45□□□□□ -1.86
SCAF11-214ENST00000550893 C11orf68Q9H3H3 251 aaKnown RBP3.45□□□□□ -1.86
SCAF11-214ENST00000550893 PALMDQ9NP74 551 aa3.45□□□□□ -1.86
SCAF11-214ENST00000550893 RPS10P5Q9NQ39 176 aa3.45□□□□□ -1.86
SCAF11-214ENST00000550893 CTNNBIP1Q9NSA3 81 aaPredicted RBP3.45□□□□□ -1.86
SCAF11-214ENST00000550893 THYN1Q9P016 225 aa3.45□□□□□ -1.86
SCAF11-214ENST00000550893 C14orf166Q9Y224 244 aaKnown RBP3.45□□□□□ -1.86
SCAF11-214ENST00000550893 TRAV14DV4A0A0A6YYC5 116 aa3.44□□□□□ -1.86
SCAF11-214ENST00000550893 DUXBA0A1W2PPF3 345 aa3.44□□□□□ -1.86
SCAF11-214ENST00000550893 PLAC8L1A1L4L8 177 aa3.44□□□□□ -1.86
SCAF11-214ENST00000550893 H3BP45 60 aa3.44□□□□□ -1.86
SCAF11-214ENST00000550893 GNG7O60262 68 aa3.44□□□□□ -1.86
SCAF11-214ENST00000550893 IFNA17P01571 189 aa3.44□□□□□ -1.86
SCAF11-214ENST00000550893 ZNF688P0C7X2 276 aa3.44□□□□□ -1.86
SCAF11-214ENST00000550893 PRB4P10163 310 aaPredicted RBP3.44□□□□□ -1.86
SCAF11-214ENST00000550893 SLC25A6P12236 298 aa3.44□□□□□ -1.86
SCAF11-214ENST00000550893 OR10J1P30954 320 aa3.44□□□□□ -1.86
SCAF11-214ENST00000550893 TFPI2P48307 235 aa3.44□□□□□ -1.86
SCAF11-214ENST00000550893 DEFB131AP59861 70 aa3.44□□□□□ -1.86
SCAF11-214ENST00000550893 ERHP84090 104 aaKnown RBP3.44□□□□□ -1.86
SCAF11-214ENST00000550893 TATDN3Q17R31 274 aa3.44□□□□□ -1.86
SCAF11-214ENST00000550893 PYDC2Q56P42 97 aa3.44□□□□□ -1.86
SCAF11-214ENST00000550893 TMEM128Q5BJH2 165 aa3.44□□□□□ -1.86
SCAF11-214ENST00000550893 TMEM14EPQ6UXP3 125 aa3.44□□□□□ -1.86
SCAF11-214ENST00000550893 PATE2Q6UY27 113 aa3.44□□□□□ -1.86
SCAF11-214ENST00000550893 ACOT7LQ6ZUV0 252 aa3.44□□□□□ -1.86
SCAF11-214ENST00000550893 TMED4Q7Z7H5 227 aa3.44□□□□□ -1.86
SCAF11-214ENST00000550893 OR51G1Q8NGK1 321 aa3.44□□□□□ -1.86
SCAF11-214ENST00000550893 OR1S2Q8NGQ3 325 aa3.44□□□□□ -1.86
SCAF11-214ENST00000550893 MAGT1Q9H0U3 335 aa3.44□□□□□ -1.86
SCAF11-214ENST00000550893 MCUBQ9NWR8 336 aa3.44□□□□□ -1.86
SCAF11-214ENST00000550893 RABL2AQ9UBK7 228 aaPredicted RBP3.44□□□□□ -1.86
SCAF11-214ENST00000550893 RABL2BQ9UNT1 228 aa3.44□□□□□ -1.86
SCAF11-214ENST00000550893 FAT1Q14517 4588 aa3.43□□□□□ -1.86
SCAF11-214ENST00000550893 OR4C46A6NHA9 309 aa3.43□□□□□ -1.86
SCAF11-214ENST00000550893 CEBPZOSA8MTT3 80 aa3.43□□□□□ -1.86
SCAF11-214ENST00000550893 F6UB75 175 aa3.43□□□□□ -1.86
SCAF11-214ENST00000550893 H3BRN7 92 aa3.43□□□□□ -1.86
SCAF11-214ENST00000550893 CORTO00230 105 aa3.43□□□□□ -1.86
SCAF11-214ENST00000550893 CCSO14618 274 aa3.43□□□□□ -1.86
SCAF11-214ENST00000550893 DEFB4AO15263 64 aa3.43□□□□□ -1.86
SCAF11-214ENST00000550893 CRXO43186 299 aaPredicted RBP3.43□□□□□ -1.86
SCAF11-214ENST00000550893 IL4P05112 153 aa3.43□□□□□ -1.86
SCAF11-214ENST00000550893 SLC25A4P12235 298 aa3.43□□□□□ -1.86
SCAF11-214ENST00000550893 GATA1P15976 413 aaPredicted RBP3.43□□□□□ -1.86
SCAF11-214ENST00000550893 HLA-DMBP28068 263 aa3.43□□□□□ -1.86
SCAF11-214ENST00000550893 NPBWR1P48145 328 aa3.43□□□□□ -1.86
SCAF11-214ENST00000550893 POLR2GP62487 172 aaKnown RBP eCLIP3.43□□□□□ -1.86
SCAF11-214ENST00000550893 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa3.43□□□□□ -1.86
SCAF11-214ENST00000550893 ZNF705AQ6ZN79 300 aaPredicted RBP3.43□□□□□ -1.86
SCAF11-214ENST00000550893 RBPMS2Q6ZRY4 209 aaKnown RBP3.43□□□□□ -1.86
SCAF11-214ENST00000550893 LGI3Q8N145 548 aa3.43□□□□□ -1.86
SCAF11-214ENST00000550893 CENPSQ8N2Z9 138 aa3.43□□□□□ -1.86
SCAF11-214ENST00000550893 TOMM5Q8N4H5 51 aa3.43□□□□□ -1.86
SCAF11-214ENST00000550893 RPP25LQ8N5L8 163 aaKnown RBP3.43□□□□□ -1.86
SCAF11-214ENST00000550893 DUSP18Q8NEJ0 188 aa3.43□□□□□ -1.86
SCAF11-214ENST00000550893 PHLDA1Q8WV24 401 aaPredicted RBP3.43□□□□□ -1.86
SCAF11-214ENST00000550893 MITD1Q8WV92 249 aa3.43□□□□□ -1.86
SCAF11-214ENST00000550893 DEDD2Q8WXF8 326 aa3.43□□□□□ -1.86
SCAF11-214ENST00000550893 ACY3Q96HD9 319 aa3.43□□□□□ -1.86
SCAF11-214ENST00000550893 TRGV9Q99603 122 aa3.43□□□□□ -1.86
SCAF11-214ENST00000550893 SEC22CQ9BRL7 303 aa3.43□□□□□ -1.86
SCAF11-214ENST00000550893 C20orf85Q9H1P6 137 aa3.43□□□□□ -1.86
SCAF11-214ENST00000550893 TUBA4BQ9H853 241 aa3.43□□□□□ -1.86
SCAF11-214ENST00000550893 SCP2D1Q9UJQ7 156 aa3.43□□□□□ -1.86
SCAF11-214ENST00000550893 ZNF705FA8MVS1 300 aaPredicted RBP3.42□□□□□ -1.86
SCAF11-214ENST00000550893 H3BMM0 161 aa3.42□□□□□ -1.86
SCAF11-214ENST00000550893 K7EPK0 472 aa3.42□□□□□ -1.86
SCAF11-214ENST00000550893 SLC17A3O00476 420 aa3.42□□□□□ -1.86
SCAF11-214ENST00000550893 SYNGR2O43760 224 aa3.42□□□□□ -1.86
SCAF11-214ENST00000550893 DEDDO75618 318 aa3.42□□□□□ -1.86
SCAF11-214ENST00000550893 YIF1AO95070 293 aa3.42□□□□□ -1.86
SCAF11-214ENST00000550893 PRM2P04554 102 aa3.42□□□□□ -1.86
SCAF11-214ENST00000550893 OR4E1P0C645 316 aa3.42□□□□□ -1.86
SCAF11-214ENST00000550893 LINC00869P0C866 280 aa3.42□□□□□ -1.86
SCAF11-214ENST00000550893 ZNF705DP0CH99 300 aaPredicted RBP3.42□□□□□ -1.86
SCAF11-214ENST00000550893 ZNF705BP0CI00 300 aaPredicted RBP3.42□□□□□ -1.86
SCAF11-214ENST00000550893 HLA-DRB4P13762 266 aa3.42□□□□□ -1.86
SCAF11-214ENST00000550893 SNCAP37840 140 aa3.42□□□□□ -1.86
SCAF11-214ENST00000550893 PLP1P60201 277 aa3.42□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 44.2 ms