RNA–Protein interactions for RNA: ENST00000550884.2

AC087888.1-201, humanhuman

BASIC

Gene AC087888.1, Length 1,254 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC087888.1-201ENST00000550884 NUP35Q8NFH5 326 aa3.12□□□□□ -1.91
AC087888.1-201ENST00000550884 OR10P1Q8NGE3 313 aa3.12□□□□□ -1.91
AC087888.1-201ENST00000550884 BORCS5Q969J3 196 aa3.12□□□□□ -1.91
AC087888.1-201ENST00000550884 COX14Q96I36 57 aa3.12□□□□□ -1.91
AC087888.1-201ENST00000550884 TM2D3Q9BRN9 247 aa3.12□□□□□ -1.91
AC087888.1-201ENST00000550884 CCDC32Q9BV29 185 aa3.12□□□□□ -1.91
AC087888.1-201ENST00000550884 TTTY13Q9BZ97 58 aa3.12□□□□□ -1.91
AC087888.1-201ENST00000550884 KLK12Q9UKR0 248 aa3.12□□□□□ -1.91
AC087888.1-201ENST00000550884 ERGIC3Q9Y282 383 aa3.12□□□□□ -1.91
AC087888.1-201ENST00000550884 NUP210LQ5VU65 1888 aa3.11□□□□□ -1.91
AC087888.1-201ENST00000550884 CFAP54Q96N23 3096 aa3.11□□□□□ -1.91
AC087888.1-201ENST00000550884 SEC16AO15027 2179 aa3.11□□□□□ -1.91
AC087888.1-201ENST00000550884 TRAV40A0A0B4J280 105 aa3.11□□□□□ -1.91
AC087888.1-201ENST00000550884 LOC102725191A0A1B0GVB3 256 aa3.11□□□□□ -1.91
AC087888.1-201ENST00000550884 TRAPPC2LH3BP13 241 aa3.11□□□□□ -1.91
AC087888.1-201ENST00000550884 CCL22O00626 93 aa3.11□□□□□ -1.91
AC087888.1-201ENST00000550884 UBFD1O14562 309 aaKnown RBP3.11□□□□□ -1.91
AC087888.1-201ENST00000550884 PIAS1O75925 651 aa3.11□□□□□ -1.91
AC087888.1-201ENST00000550884 NPYP01303 97 aa3.11□□□□□ -1.91
AC087888.1-201ENST00000550884 C1QAP02745 245 aa3.11□□□□□ -1.91
AC087888.1-201ENST00000550884 OR10J4P0C629 311 aa3.11□□□□□ -1.91
AC087888.1-201ENST00000550884 OGNP20774 298 aaKnown RBP3.11□□□□□ -1.91
AC087888.1-201ENST00000550884 CSRP1P21291 193 aaKnown RBP3.11□□□□□ -1.91
AC087888.1-201ENST00000550884 SRIP30626 198 aa3.11□□□□□ -1.91
AC087888.1-201ENST00000550884 ZNF80P51504 273 aaPredicted RBP3.11□□□□□ -1.91
AC087888.1-201ENST00000550884 HIST1H4AP62805 103 aaKnown RBP3.11□□□□□ -1.91
AC087888.1-201ENST00000550884 FLI1Q01543 452 aaPredicted RBP3.11□□□□□ -1.91
AC087888.1-201ENST00000550884 AKR1C1Q04828 323 aa3.11□□□□□ -1.91
AC087888.1-201ENST00000550884 RPL18Q07020 188 aaKnown RBP3.11□□□□□ -1.91
AC087888.1-201ENST00000550884 FAM229BQ4G0N7 80 aa3.11□□□□□ -1.91
AC087888.1-201ENST00000550884 LCA10Q71F78 164 aa3.11□□□□□ -1.91
AC087888.1-201ENST00000550884 DHFR2Q86XF0 187 aa3.11□□□□□ -1.91
AC087888.1-201ENST00000550884 CLVS1Q8IUQ0 354 aaPredicted RBP3.11□□□□□ -1.91
AC087888.1-201ENST00000550884 MMGT1Q8N4V1 131 aa3.11□□□□□ -1.91
AC087888.1-201ENST00000550884 Q8NAQ8 132 aa3.11□□□□□ -1.91
AC087888.1-201ENST00000550884 OR5J2Q8NH18 312 aa3.11□□□□□ -1.91
AC087888.1-201ENST00000550884 OR4C6Q8NH72 309 aa3.11□□□□□ -1.91
AC087888.1-201ENST00000550884 SCRT1Q9BWW7 348 aa3.11□□□□□ -1.91
AC087888.1-201ENST00000550884 FAM107BQ9H098 131 aa3.11□□□□□ -1.91
AC087888.1-201ENST00000550884 ASF1BQ9NVP2 202 aa3.11□□□□□ -1.91
AC087888.1-201ENST00000550884 MED11Q9P086 117 aa3.11□□□□□ -1.91
AC087888.1-201ENST00000550884 OR52A1Q9UKL2 312 aa3.11□□□□□ -1.91
AC087888.1-201ENST00000550884 SDK2Q58EX2 2172 aa3.11□□□□□ -1.91
AC087888.1-201ENST00000550884 FRYLO94915 3013 aa3.11□□□□□ -1.91
AC087888.1-201ENST00000550884 WDR87Q6ZQQ6 2873 aa3.1□□□□□ -1.91
AC087888.1-201ENST00000550884 SCN3AQ9NY46 2000 aa3.1□□□□□ -1.91
AC087888.1-201ENST00000550884 ACACAQ13085 2346 aa3.1□□□□□ -1.91
AC087888.1-201ENST00000550884 BPTFQ12830 3046 aa3.1□□□□□ -1.91
AC087888.1-201ENST00000550884 DMXL1Q9Y485 3027 aa3.1□□□□□ -1.91
AC087888.1-201ENST00000550884 A0A1B0GU33 70 aa3.1□□□□□ -1.91
AC087888.1-201ENST00000550884 DUXBA0A1W2PPF3 345 aa3.1□□□□□ -1.91
AC087888.1-201ENST00000550884 OR51F1A6NGY5 319 aa3.1□□□□□ -1.91
AC087888.1-201ENST00000550884 C17orf98A8MV24 154 aa3.1□□□□□ -1.91
AC087888.1-201ENST00000550884 ZNF73O43830 326 aaPredicted RBP3.1□□□□□ -1.91
AC087888.1-201ENST00000550884 GTF2A1P52655 376 aaPredicted RBP3.1□□□□□ -1.91
AC087888.1-201ENST00000550884 BAMBIQ13145 260 aa3.1□□□□□ -1.91
AC087888.1-201ENST00000550884 DEFB133Q30KQ1 61 aa3.1□□□□□ -1.91
AC087888.1-201ENST00000550884 SPANXN3Q5MJ09 141 aa3.1□□□□□ -1.91
AC087888.1-201ENST00000550884 TCF24Q7RTU0 167 aa3.1□□□□□ -1.91
AC087888.1-201ENST00000550884 KTN1-AS1Q86SY8 53 aa3.1□□□□□ -1.91
AC087888.1-201ENST00000550884 IFT20Q8IY31 132 aa3.1□□□□□ -1.91
AC087888.1-201ENST00000550884 DEFB124Q8NES8 71 aa3.1□□□□□ -1.91
AC087888.1-201ENST00000550884 CCL4L1Q8NHW4 92 aa3.1□□□□□ -1.91
AC087888.1-201ENST00000550884 SMCR5Q8TEV8 140 aa3.1□□□□□ -1.91
AC087888.1-201ENST00000550884 MBD3L1Q8WWY6 194 aa3.1□□□□□ -1.91
AC087888.1-201ENST00000550884 ZNF285Q96NJ3 590 aa3.1□□□□□ -1.91
AC087888.1-201ENST00000550884 AICDAQ9GZX7 198 aa3.1□□□□□ -1.91
AC087888.1-201ENST00000550884 TCEAL2Q9H3H9 227 aaPredicted RBP3.1□□□□□ -1.91
AC087888.1-201ENST00000550884 DCHS1Q96JQ0 3298 aa3.1□□□□□ -1.91
AC087888.1-201ENST00000550884 DNAH14Q0VDD8 3507 aa3.09□□□□□ -1.91
AC087888.1-201ENST00000550884 SPAARA0A1B0GVQ0 90 aa3.09□□□□□ -1.91
AC087888.1-201ENST00000550884 GGT3PA6NGU5 568 aa3.09□□□□□ -1.91
AC087888.1-201ENST00000550884 FABP5P3A8MUU1 101 aa3.09□□□□□ -1.91
AC087888.1-201ENST00000550884 GGTLC3B5MD39 225 aa3.09□□□□□ -1.91
AC087888.1-201ENST00000550884 BUB1B-PAK6H3BSN5 160 aa3.09□□□□□ -1.91
AC087888.1-201ENST00000550884 RPL36A-HNRNPH2H7BZ11 118 aa3.09□□□□□ -1.91
AC087888.1-201ENST00000550884 K7EM74 188 aa3.09□□□□□ -1.91
AC087888.1-201ENST00000550884 OR1I1O60431 355 aa3.09□□□□□ -1.91
AC087888.1-201ENST00000550884 RPS3P23396 243 aaKnown RBP eCLIP3.09□□□□□ -1.91
AC087888.1-201ENST00000550884 HLA-DMBP28068 263 aa3.09□□□□□ -1.91
AC087888.1-201ENST00000550884 EMP1P54849 157 aa3.09□□□□□ -1.91
AC087888.1-201ENST00000550884 MEF2BQ02080 365 aaPredicted RBP3.09□□□□□ -1.91
AC087888.1-201ENST00000550884 ZNF117Q03924 483 aa3.09□□□□□ -1.91
AC087888.1-201ENST00000550884 NOXRED1Q6NXP6 359 aa3.09□□□□□ -1.91
AC087888.1-201ENST00000550884 C2orf91Q6ZV80 131 aa3.09□□□□□ -1.91
AC087888.1-201ENST00000550884 OR9Q1Q8NGQ5 310 aa3.09□□□□□ -1.91
AC087888.1-201ENST00000550884 OR5C1Q8NGR4 320 aa3.09□□□□□ -1.91
AC087888.1-201ENST00000550884 THEM6Q8WUY1 208 aa3.09□□□□□ -1.91
AC087888.1-201ENST00000550884 HSPB9Q9BQS6 159 aa3.09□□□□□ -1.91
AC087888.1-201ENST00000550884 GSKIPQ9P0R6 139 aa3.09□□□□□ -1.91
AC087888.1-201ENST00000550884 JPT1Q9UK76 154 aa3.09□□□□□ -1.91
AC087888.1-201ENST00000550884 ASB4Q9Y574 426 aa3.09□□□□□ -1.91
AC087888.1-201ENST00000550884 ZNF407Q9C0G0 2248 aa3.09□□□□□ -1.91
AC087888.1-201ENST00000550884 CACNA1AO00555 2505 aa3.08□□□□□ -1.92
AC087888.1-201ENST00000550884 IGLV4-60A0A075B6I1 120 aa3.08□□□□□ -1.92
AC087888.1-201ENST00000550884 IGKV2D-24A0A075B6R9 120 aa3.08□□□□□ -1.92
AC087888.1-201ENST00000550884 IGHV3-15A0A0B4J1V0 119 aa3.08□□□□□ -1.92
AC087888.1-201ENST00000550884 COLCA2A8K830 154 aa3.08□□□□□ -1.92
AC087888.1-201ENST00000550884 M0QZK8 103 aa3.08□□□□□ -1.92
AC087888.1-201ENST00000550884 TXNDC9O14530 226 aa3.08□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 81.7 ms