RNA–Protein interactions for RNA: ENST00000550841.1

NEK3-202, Transcript of NIMA related kinase 3, humanhuman

TSL 4

Gene NEK3, Length 569 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3-202ENST00000550841 IGLC2P0DOY2 106 aa15.94■□□□□ 0.14
NEK3-202ENST00000550841 PSMG4Q5JS54 123 aa15.94■□□□□ 0.14
NEK3-202ENST00000550841 EIF5AL1Q6IS14 154 aaKnown RBP15.94■□□□□ 0.14
NEK3-202ENST00000550841 SLC51BQ86UW2 128 aa15.94■□□□□ 0.14
NEK3-202ENST00000550841 C9orf62Q8N4C0 152 aa15.94■□□□□ 0.14
NEK3-202ENST00000550841 STOML3Q8TAV4 291 aa15.94■□□□□ 0.14
NEK3-202ENST00000550841 FAM167A-AS1Q96KT0 104 aa15.94■□□□□ 0.14
NEK3-202ENST00000550841 LINC00052Q96N35 136 aa15.94■□□□□ 0.14
NEK3-202ENST00000550841 SLC50A1Q9BRV3 221 aa15.94■□□□□ 0.14
NEK3-202ENST00000550841 SRD5A3Q9H8P0 318 aa15.94■□□□□ 0.14
NEK3-202ENST00000550841 DNAH3Q8TD57 4116 aa15.93■□□□□ 0.14
NEK3-202ENST00000550841 CDC34P49427 236 aaPredicted RBP15.93■□□□□ 0.14
NEK3-202ENST00000550841 PQLC2Q6ZP29 291 aa15.93■□□□□ 0.14
NEK3-202ENST00000550841 RPP25LQ8N5L8 163 aaKnown RBP15.93■□□□□ 0.14
NEK3-202ENST00000550841 C17orf77Q96MU5 243 aa15.93■□□□□ 0.14
NEK3-202ENST00000550841 RPRMQ9NS64 109 aa15.93■□□□□ 0.14
NEK3-202ENST00000550841 UMAD1C9J7I0 102 aa15.92■□□□□ 0.14
NEK3-202ENST00000550841 OR7C2O60412 319 aa15.92■□□□□ 0.14
NEK3-202ENST00000550841 ZNF253O75346 499 aa15.92■□□□□ 0.14
NEK3-202ENST00000550841 APRG1Q8IVJ8 170 aa15.92■□□□□ 0.14
NEK3-202ENST00000550841 RNF141Q8WVD5 230 aa15.92■□□□□ 0.14
NEK3-202ENST00000550841 WFDC10AQ9H1F0 79 aa15.92■□□□□ 0.14
NEK3-202ENST00000550841 H3BQ15 152 aa15.91■□□□□ 0.14
NEK3-202ENST00000550841 NBEAP1P0C6P0 100 aa15.91■□□□□ 0.14
NEK3-202ENST00000550841 PDE6HQ13956 83 aa15.91■□□□□ 0.14
NEK3-202ENST00000550841 RAB24Q969Q5 203 aa15.91■□□□□ 0.14
NEK3-202ENST00000550841 ZNF586Q9NXT0 402 aa15.91■□□□□ 0.14
NEK3-202ENST00000550841 TRBV19A0A075B6N1 114 aa15.9■□□□□ 0.14
NEK3-202ENST00000550841 FRMD6-AS1P0C7T7 363 aa15.9■□□□□ 0.14
NEK3-202ENST00000550841 PYYP10082 97 aa15.9■□□□□ 0.14
NEK3-202ENST00000550841 PSG9Q00887 426 aa15.9■□□□□ 0.14
NEK3-202ENST00000550841 SAT2Q96F10 170 aaPredicted RBP15.9■□□□□ 0.14
NEK3-202ENST00000550841 ZNF331Q9NQX6 463 aaPredicted RBP15.9■□□□□ 0.14
NEK3-202ENST00000550841 LOC102724200A0A096LPH7 203 aaPredicted RBP15.89■□□□□ 0.13
NEK3-202ENST00000550841 STHQ8IWL8 128 aa15.89■□□□□ 0.13
NEK3-202ENST00000550841 TRAV8-2A0A0B4J237 113 aa15.88■□□□□ 0.13
NEK3-202ENST00000550841 CTXND1A0A1B0GTU2 59 aa15.88■□□□□ 0.13
NEK3-202ENST00000550841 SNRPCP09234 159 aaKnown RBP15.88■□□□□ 0.13
NEK3-202ENST00000550841 STAG3L2P0CL84 134 aa15.88■□□□□ 0.13
NEK3-202ENST00000550841 STAG3L3P0CL85 134 aa15.88■□□□□ 0.13
NEK3-202ENST00000550841 PSG3Q16557 428 aa15.88■□□□□ 0.13
NEK3-202ENST00000550841 EBLN2Q6P2I7 272 aa15.88■□□□□ 0.13
NEK3-202ENST00000550841 DPPA3Q6W0C5 159 aa15.88■□□□□ 0.13
NEK3-202ENST00000550841 BLNKQ8WV28 456 aa15.88■□□□□ 0.13
NEK3-202ENST00000550841 FXYD5Q96DB9 178 aa15.88■□□□□ 0.13
NEK3-202ENST00000550841 CITED4Q96RK1 184 aa15.88■□□□□ 0.13
NEK3-202ENST00000550841 RBMY1BA6NDE4 496 aaKnown RBP15.87■□□□□ 0.13
NEK3-202ENST00000550841 RBMY1EA6NEQ0 496 aaKnown RBP15.87■□□□□ 0.13
NEK3-202ENST00000550841 CXorf1O96002 111 aa15.87■□□□□ 0.13
NEK3-202ENST00000550841 OR10J4P0C629 311 aa15.87■□□□□ 0.13
NEK3-202ENST00000550841 RBMY1DP0C7P1 496 aaKnown RBP15.87■□□□□ 0.13
NEK3-202ENST00000550841 NKX2-5P52952 324 aaPredicted RBP15.87■□□□□ 0.13
NEK3-202ENST00000550841 UBE2L3P68036 154 aaKnown RBP15.87■□□□□ 0.13
NEK3-202ENST00000550841 LINC00322Q6ZN03 302 aaPredicted RBP15.87■□□□□ 0.13
NEK3-202ENST00000550841 FOXI2Q6ZQN5 318 aa15.87■□□□□ 0.13
NEK3-202ENST00000550841 ZNF503Q96F45 646 aa15.87■□□□□ 0.13
NEK3-202ENST00000550841 B9D2Q9BPU9 175 aa15.87■□□□□ 0.13
NEK3-202ENST00000550841 AAMDCQ9H7C9 122 aa15.87■□□□□ 0.13
NEK3-202ENST00000550841 PRELID1Q9Y255 219 aa15.87■□□□□ 0.13
NEK3-202ENST00000550841 H3BTX0 84 aa15.86■□□□□ 0.13
NEK3-202ENST00000550841 RAB5CP51148 216 aa15.86■□□□□ 0.13
NEK3-202ENST00000550841 ZNF124Q15973 351 aa15.86■□□□□ 0.13
NEK3-202ENST00000550841 ACTL10Q5JWF8 245 aa15.86■□□□□ 0.13
NEK3-202ENST00000550841 LYPD1Q8N2G4 141 aa15.86■□□□□ 0.13
NEK3-202ENST00000550841 ZNF738Q8NE65 137 aa15.86■□□□□ 0.13
NEK3-202ENST00000550841 TMED6Q8WW62 240 aa15.86■□□□□ 0.13
NEK3-202ENST00000550841 C20orf173Q96LM9 149 aa15.86■□□□□ 0.13
NEK3-202ENST00000550841 KNCNA6PVL3 124 aa15.85■□□□□ 0.13
NEK3-202ENST00000550841 HMGB3O15347 200 aaKnown RBP15.85■□□□□ 0.13
NEK3-202ENST00000550841 APOC4P55056 127 aa15.85■□□□□ 0.13
NEK3-202ENST00000550841 IGFL4Q6B9Z1 124 aa15.85■□□□□ 0.13
NEK3-202ENST00000550841 RNF182Q8N6D2 247 aa15.85■□□□□ 0.13
NEK3-202ENST00000550841 SAV1Q9H4B6 383 aaPredicted RBP15.85■□□□□ 0.13
NEK3-202ENST00000550841 TMEM167BQ9NRX6 74 aa15.85■□□□□ 0.13
NEK3-202ENST00000550841 KIR2DL5BA0A0G2JN68 375 aa15.84■□□□□ 0.13
NEK3-202ENST00000550841 KIR2DL5BA0A0G2JPC4 375 aa15.84■□□□□ 0.13
NEK3-202ENST00000550841 SLC17A3O00476 420 aa15.84■□□□□ 0.13
NEK3-202ENST00000550841 NDUFB4O95168 129 aa15.84■□□□□ 0.13
NEK3-202ENST00000550841 ARL14EPLP0DKL9 152 aa15.84■□□□□ 0.13
NEK3-202ENST00000550841 KIR2DL5AQ8N109 375 aa15.84■□□□□ 0.13
NEK3-202ENST00000550841 KIR2DL5BQ8NHK3 375 aa15.84■□□□□ 0.13
NEK3-202ENST00000550841 MRPL53Q96EL3 112 aaKnown RBP15.84■□□□□ 0.13
NEK3-202ENST00000550841 H3BMM0 161 aa15.83■□□□□ 0.12
NEK3-202ENST00000550841 EIF3GO75821 320 aaKnown RBP eCLIP15.83■□□□□ 0.12
NEK3-202ENST00000550841 DUSP14O95147 198 aaKnown RBP15.83■□□□□ 0.12
NEK3-202ENST00000550841 HLA-DRB4P13762 266 aa15.83■□□□□ 0.12
NEK3-202ENST00000550841 RPL35AP18077 110 aaKnown RBP15.83■□□□□ 0.12
NEK3-202ENST00000550841 GCHFRP30047 84 aa15.83■□□□□ 0.12
NEK3-202ENST00000550841 RPUSD4Q96CM3 377 aaKnown RBP15.83■□□□□ 0.12
NEK3-202ENST00000550841 HLA-DRB4X5D2U9 266 aa15.83■□□□□ 0.12
NEK3-202ENST00000550841 UBE2CO00762 179 aa15.82■□□□□ 0.12
NEK3-202ENST00000550841 NHLRC4P0CG21 123 aaPredicted RBP15.82■□□□□ 0.12
NEK3-202ENST00000550841 HLA-DMBP28068 263 aa15.82■□□□□ 0.12
NEK3-202ENST00000550841 NUTF2P61970 127 aaKnown RBP15.82■□□□□ 0.12
NEK3-202ENST00000550841 ZNF726P1Q15940 193 aa15.82■□□□□ 0.12
NEK3-202ENST00000550841 HAGHQ16775 308 aa15.82■□□□□ 0.12
NEK3-202ENST00000550841 FAM74A1Q5RGS3 127 aa15.82■□□□□ 0.12
NEK3-202ENST00000550841 FAM213BQ8TBF2 198 aa15.82■□□□□ 0.12
NEK3-202ENST00000550841 PHYHIPLQ96FC7 376 aa15.82■□□□□ 0.12
NEK3-202ENST00000550841 CLUHP3Q96NS8 147 aa15.82■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 162.6 ms