RNA–Protein interactions for RNA: ENST00000547517.5

RAB5C-204, Transcript of RAB5C, member RAS oncogene family, humanhuman

TSL 1 (best) BASIC

Gene RAB5C, Length 1,167 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5C-204ENST00000547517 RYR2Q92736 4967 aa8.6□□□□□ -1.03
RAB5C-204ENST00000547517 A0A0J9YX75 114 aa8.6□□□□□ -1.03
RAB5C-204ENST00000547517 H3BTX0 84 aa8.6□□□□□ -1.03
RAB5C-204ENST00000547517 MRPS12O15235 138 aaKnown RBP8.6□□□□□ -1.03
RAB5C-204ENST00000547517 ATP6V1G1O75348 118 aa8.6□□□□□ -1.03
RAB5C-204ENST00000547517 HLA-DMBP28068 263 aa8.6□□□□□ -1.03
RAB5C-204ENST00000547517 FAM78BQ5VT40 261 aa8.6□□□□□ -1.03
RAB5C-204ENST00000547517 SPATA31B1PQ5VZV4 182 aa8.6□□□□□ -1.03
RAB5C-204ENST00000547517 BPIFA4PQ86YQ2 179 aa8.6□□□□□ -1.03
RAB5C-204ENST00000547517 CSNK1G2-AS1Q8NCQ2 148 aa8.6□□□□□ -1.03
RAB5C-204ENST00000547517 LRRC20Q8TCA0 184 aa8.6□□□□□ -1.03
RAB5C-204ENST00000547517 ATP5SQ99766 215 aa8.6□□□□□ -1.03
RAB5C-204ENST00000547517 C1QTNF4Q9BXJ3 329 aa8.6□□□□□ -1.03
RAB5C-204ENST00000547517 SMIM3Q9BZL3 60 aa8.6□□□□□ -1.03
RAB5C-204ENST00000547517 WDR61Q9GZS3 305 aaKnown RBP8.6□□□□□ -1.03
RAB5C-204ENST00000547517 C11orf68Q9H3H3 251 aaKnown RBP8.6□□□□□ -1.03
RAB5C-204ENST00000547517 DNAJC4Q9NNZ3 241 aa8.6□□□□□ -1.03
RAB5C-204ENST00000547517 HSPB11Q9Y547 144 aa8.6□□□□□ -1.03
RAB5C-204ENST00000547517 DYNC2H1Q8NCM8 4307 aaKnown RBP8.59□□□□□ -1.03
RAB5C-204ENST00000547517 TRAV5A0A0B4J249 113 aa8.59□□□□□ -1.03
RAB5C-204ENST00000547517 IGHV4-28A0A0C4DH34 117 aa8.59□□□□□ -1.03
RAB5C-204ENST00000547517 ZNF705DP0CH99 300 aaPredicted RBP8.59□□□□□ -1.03
RAB5C-204ENST00000547517 ZNF705BP0CI00 300 aaPredicted RBP8.59□□□□□ -1.03
RAB5C-204ENST00000547517 PRB4P10163 310 aaPredicted RBP8.59□□□□□ -1.03
RAB5C-204ENST00000547517 RPL12P30050 165 aaKnown RBP8.59□□□□□ -1.03
RAB5C-204ENST00000547517 GCSAMLQ5JQS6 135 aa8.59□□□□□ -1.03
RAB5C-204ENST00000547517 LCN15Q6UWW0 184 aa8.59□□□□□ -1.03
RAB5C-204ENST00000547517 ZNF709Q8N972 641 aa8.59□□□□□ -1.03
RAB5C-204ENST00000547517 Q8NAQ8 132 aa8.59□□□□□ -1.03
RAB5C-204ENST00000547517 MFFQ9GZY8 342 aa8.59□□□□□ -1.03
RAB5C-204ENST00000547517 SLC35B3Q9H1N7 401 aa8.59□□□□□ -1.03
RAB5C-204ENST00000547517 KCNIP2Q9NS61 270 aa8.59□□□□□ -1.03
RAB5C-204ENST00000547517 X6R8D5 127 aa8.59□□□□□ -1.03
RAB5C-204ENST00000547517 SACSQ9NZJ4 4579 aa8.59□□□□□ -1.03
RAB5C-204ENST00000547517 ZNF705EA8MWA4 302 aaPredicted RBP8.58□□□□□ -1.04
RAB5C-204ENST00000547517 SLC17A3O00476 420 aa8.58□□□□□ -1.04
RAB5C-204ENST00000547517 IGLC2P0DOY2 106 aa8.58□□□□□ -1.04
RAB5C-204ENST00000547517 CXCL2P19875 107 aa8.58□□□□□ -1.04
RAB5C-204ENST00000547517 S100A1P23297 94 aa8.58□□□□□ -1.04
RAB5C-204ENST00000547517 CNN1P51911 297 aaKnown RBP8.58□□□□□ -1.04
RAB5C-204ENST00000547517 PSG9Q00887 426 aa8.58□□□□□ -1.04
RAB5C-204ENST00000547517 CLUHP3Q96NS8 147 aa8.58□□□□□ -1.04
RAB5C-204ENST00000547517 SLC50A1Q9BRV3 221 aa8.58□□□□□ -1.04
RAB5C-204ENST00000547517 IGHV3OR16-12A0A075B7B8 117 aa8.57□□□□□ -1.04
RAB5C-204ENST00000547517 C17orf112F2Z3M2 114 aa8.57□□□□□ -1.04
RAB5C-204ENST00000547517 H3BQ15 152 aa8.57□□□□□ -1.04
RAB5C-204ENST00000547517 DUSP14O95147 198 aaKnown RBP8.57□□□□□ -1.04
RAB5C-204ENST00000547517 MIFP14174 115 aa8.57□□□□□ -1.04
RAB5C-204ENST00000547517 HIST1H1AQ02539 215 aaPredicted RBP8.57□□□□□ -1.04
RAB5C-204ENST00000547517 HRH4Q9H3N8 390 aa8.57□□□□□ -1.04
RAB5C-204ENST00000547517 ZNF331Q9NQX6 463 aaPredicted RBP8.57□□□□□ -1.04
RAB5C-204ENST00000547517 PLECQ15149 4684 aaKnown RBP8.56□□□□□ -1.04
RAB5C-204ENST00000547517 NUPR2A6NF83 97 aa8.56□□□□□ -1.04
RAB5C-204ENST00000547517 RGS13O14921 159 aa8.56□□□□□ -1.04
RAB5C-204ENST00000547517 IFNA5P01569 189 aa8.56□□□□□ -1.04
RAB5C-204ENST00000547517 RBMY1A1P0DJD3 496 aaKnown RBP8.56□□□□□ -1.04
RAB5C-204ENST00000547517 RBMY1CP0DJD4 496 aa8.56□□□□□ -1.04
RAB5C-204ENST00000547517 NANOS2P60321 138 aaKnown RBP8.56□□□□□ -1.04
RAB5C-204ENST00000547517 RBMY1FQ15415 496 aaKnown RBP8.56□□□□□ -1.04
RAB5C-204ENST00000547517 PSG3Q16557 428 aa8.56□□□□□ -1.04
RAB5C-204ENST00000547517 ZFP69Q49AA0 526 aa8.56□□□□□ -1.04
RAB5C-204ENST00000547517 AMTNQ6UX39 209 aa8.56□□□□□ -1.04
RAB5C-204ENST00000547517 OR8A1Q8NGG7 326 aa8.56□□□□□ -1.04
RAB5C-204ENST00000547517 C11orf45Q8TAV5 145 aa8.56□□□□□ -1.04
RAB5C-204ENST00000547517 SCGB1C1Q8TD33 95 aa8.56□□□□□ -1.04
RAB5C-204ENST00000547517 RPUSD4Q96CM3 377 aaKnown RBP8.56□□□□□ -1.04
RAB5C-204ENST00000547517 A8MTW9 85 aa8.55□□□□□ -1.04
RAB5C-204ENST00000547517 M0R2Z0 102 aa8.55□□□□□ -1.04
RAB5C-204ENST00000547517 GIPP09681 153 aaPredicted RBP8.55□□□□□ -1.04
RAB5C-204ENST00000547517 PYYP10082 97 aa8.55□□□□□ -1.04
RAB5C-204ENST00000547517 RHOBP62745 196 aa8.55□□□□□ -1.04
RAB5C-204ENST00000547517 GUK1Q16774 197 aa8.55□□□□□ -1.04
RAB5C-204ENST00000547517 SPINK13Q1W4C9 94 aa8.55□□□□□ -1.04
RAB5C-204ENST00000547517 ZNF705AQ6ZN79 300 aaPredicted RBP8.55□□□□□ -1.04
RAB5C-204ENST00000547517 MIR17HGQ75NE6 70 aa8.55□□□□□ -1.04
RAB5C-204ENST00000547517 SLC25A2Q9BXI2 301 aa8.55□□□□□ -1.04
RAB5C-204ENST00000547517 WFDC1Q9HC57 220 aa8.55□□□□□ -1.04
RAB5C-204ENST00000547517 ZNF586Q9NXT0 402 aa8.55□□□□□ -1.04
RAB5C-204ENST00000547517 GOLT1BQ9Y3E0 138 aa8.55□□□□□ -1.04
RAB5C-204ENST00000547517 LYSTQ99698 3801 aa8.54□□□□□ -1.04
RAB5C-204ENST00000547517 LCE6AA0A183 80 aa8.54□□□□□ -1.04
RAB5C-204ENST00000547517 ZNF705FA8MVS1 300 aaPredicted RBP8.54□□□□□ -1.04
RAB5C-204ENST00000547517 FFAR4Q5NUL3 377 aa8.54□□□□□ -1.04
RAB5C-204ENST00000547517 BAP18Q8IXM2 172 aa8.54□□□□□ -1.04
RAB5C-204ENST00000547517 PHLDA1Q8WV24 401 aaPredicted RBP8.54□□□□□ -1.04
RAB5C-204ENST00000547517 BLNKQ8WV28 456 aa8.54□□□□□ -1.04
RAB5C-204ENST00000547517 SAT2Q96F10 170 aaPredicted RBP8.54□□□□□ -1.04
RAB5C-204ENST00000547517 MRPL32Q9BYC8 188 aaKnown RBP8.54□□□□□ -1.04
RAB5C-204ENST00000547517 PPP1R14DQ9NXH3 145 aa8.54□□□□□ -1.04
RAB5C-204ENST00000547517 TMEM14CQ9P0S9 112 aa8.54□□□□□ -1.04
RAB5C-204ENST00000547517 ALMS1Q8TCU4 4167 aa8.53□□□□□ -1.04
RAB5C-204ENST00000547517 TRBV19A0A075B6N1 114 aa8.53□□□□□ -1.04
RAB5C-204ENST00000547517 JTBO76095 146 aa8.53□□□□□ -1.04
RAB5C-204ENST00000547517 INSP01308 110 aa8.53□□□□□ -1.04
RAB5C-204ENST00000547517 AMBPP02760 352 aa8.53□□□□□ -1.04
RAB5C-204ENST00000547517 HIST1H1EP10412 219 aaKnown RBP8.53□□□□□ -1.04
RAB5C-204ENST00000547517 Q5BKY6 102 aa8.53□□□□□ -1.04
RAB5C-204ENST00000547517 CEMP1Q6PRD7 247 aaPredicted RBP8.53□□□□□ -1.04
RAB5C-204ENST00000547517 C1orf158Q8N1D5 194 aa8.53□□□□□ -1.04
RAB5C-204ENST00000547517 ASB13Q8WXK3 278 aa8.53□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 50 ms