RNA–Protein interactions for RNA: ENST00000543162.1

DDB1-221, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 4

Gene DDB1, Length 575 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-221ENST00000543162 RANP62826 216 aaKnown RBP8.08□□□□□ -1.12
DDB1-221ENST00000543162 ZNF506Q5JVG8 444 aa8.08□□□□□ -1.12
DDB1-221ENST00000543162 LINC00482Q8N8I6 264 aa8.08□□□□□ -1.12
DDB1-221ENST00000543162 C17orf77Q96MU5 243 aa8.08□□□□□ -1.12
DDB1-221ENST00000543162 RARRES2Q99969 163 aa8.08□□□□□ -1.12
DDB1-221ENST00000543162 MLXQ9UH92 298 aa8.08□□□□□ -1.12
DDB1-221ENST00000543162 VAX2Q9UIW0 290 aa8.08□□□□□ -1.12
DDB1-221ENST00000543162 YTHDF2Q9Y5A9 579 aaKnown RBP8.08□□□□□ -1.12
DDB1-221ENST00000543162 SELENOKQ9Y6D0 94 aa8.08□□□□□ -1.12
DDB1-221ENST00000543162 ARL2-SNX15V9GYD0 113 aa8.08□□□□□ -1.12
DDB1-221ENST00000543162 IGKV3-7A0A075B6H7 116 aa8.07□□□□□ -1.12
DDB1-221ENST00000543162 NDUFB4O95168 129 aa8.07□□□□□ -1.12
DDB1-221ENST00000543162 MEF2BQ02080 365 aaPredicted RBP8.07□□□□□ -1.12
DDB1-221ENST00000543162 PDE6HQ13956 83 aa8.07□□□□□ -1.12
DDB1-221ENST00000543162 ICAM4Q14773 271 aa8.07□□□□□ -1.12
DDB1-221ENST00000543162 PEA15Q15121 130 aa8.07□□□□□ -1.12
DDB1-221ENST00000543162 FAM90A2PQ658T7 463 aa8.07□□□□□ -1.12
DDB1-221ENST00000543162 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa8.07□□□□□ -1.12
DDB1-221ENST00000543162 SLC7A5P1Q8MH63 180 aa8.07□□□□□ -1.12
DDB1-221ENST00000543162 RXFP4Q8TDU9 374 aa8.07□□□□□ -1.12
DDB1-221ENST00000543162 NKX6-2Q9C056 277 aaPredicted RBP8.07□□□□□ -1.12
DDB1-221ENST00000543162 NRN1Q9NPD7 142 aa8.07□□□□□ -1.12
DDB1-221ENST00000543162 SIGLEC8Q9NYZ4 499 aa8.07□□□□□ -1.12
DDB1-221ENST00000543162 COL6A5A8TX70 2615 aa8.07□□□□□ -1.12
DDB1-221ENST00000543162 GGTLC3B5MD39 225 aa8.06□□□□□ -1.12
DDB1-221ENST00000543162 C11orf94C9JXX5 98 aa8.06□□□□□ -1.12
DDB1-221ENST00000543162 SLC17A3O00476 420 aa8.06□□□□□ -1.12
DDB1-221ENST00000543162 ZNF253O75346 499 aa8.06□□□□□ -1.12
DDB1-221ENST00000543162 SAP30O75446 220 aa8.06□□□□□ -1.12
DDB1-221ENST00000543162 ATP5G3P48201 142 aa8.06□□□□□ -1.12
DDB1-221ENST00000543162 SUMO1P63165 101 aaKnown RBP8.06□□□□□ -1.12
DDB1-221ENST00000543162 PSG9Q00887 426 aa8.06□□□□□ -1.12
DDB1-221ENST00000543162 DEFB114Q30KQ6 69 aa8.06□□□□□ -1.12
DDB1-221ENST00000543162 UQCC3Q6UW78 93 aa8.06□□□□□ -1.12
DDB1-221ENST00000543162 LYPD1Q8N2G4 141 aa8.06□□□□□ -1.12
DDB1-221ENST00000543162 TXNDC17Q9BRA2 123 aa8.06□□□□□ -1.12
DDB1-221ENST00000543162 SLC50A1Q9BRV3 221 aa8.06□□□□□ -1.12
DDB1-221ENST00000543162 Q9H3A6 140 aa8.06□□□□□ -1.12
DDB1-221ENST00000543162 AAMDCQ9H7C9 122 aa8.06□□□□□ -1.12
DDB1-221ENST00000543162 TREM1Q9NP99 234 aa8.06□□□□□ -1.12
DDB1-221ENST00000543162 OTORQ9NRC9 128 aa8.06□□□□□ -1.12
DDB1-221ENST00000543162 STAB1Q9NY15 2570 aa8.05□□□□□ -1.12
DDB1-221ENST00000543162 PGPA6NDG6 321 aa8.05□□□□□ -1.12
DDB1-221ENST00000543162 DNASE2O00115 360 aaPredicted RBP8.05□□□□□ -1.12
DDB1-221ENST00000543162 PAFAH1B2P68402 229 aa8.05□□□□□ -1.12
DDB1-221ENST00000543162 SRSF3P84103 164 aaKnown RBP8.05□□□□□ -1.12
DDB1-221ENST00000543162 SAMD13Q5VXD3 122 aa8.05□□□□□ -1.12
DDB1-221ENST00000543162 RBPMS2Q6ZRY4 209 aaKnown RBP8.05□□□□□ -1.12
DDB1-221ENST00000543162 EXOC3-AS1Q8N2X6 119 aa8.05□□□□□ -1.12
DDB1-221ENST00000543162 GBGT1Q8N5D6 347 aa8.05□□□□□ -1.12
DDB1-221ENST00000543162 EIF4E3Q8N5X7 224 aaKnown RBP8.05□□□□□ -1.12
DDB1-221ENST00000543162 C16orf92Q96LL3 132 aa8.05□□□□□ -1.12
DDB1-221ENST00000543162 CITED4Q96RK1 184 aa8.05□□□□□ -1.12
DDB1-221ENST00000543162 MS4A6AQ9H2W1 248 aa8.05□□□□□ -1.12
DDB1-221ENST00000543162 SMDT1Q9H4I9 107 aa8.05□□□□□ -1.12
DDB1-221ENST00000543162 ZNF331Q9NQX6 463 aaPredicted RBP8.05□□□□□ -1.12
DDB1-221ENST00000543162 F6UZH7 168 aa8.04□□□□□ -1.12
DDB1-221ENST00000543162 PDE6DO43924 150 aa8.04□□□□□ -1.12
DDB1-221ENST00000543162 SLC25A5P05141 298 aaKnown RBP8.04□□□□□ -1.12
DDB1-221ENST00000543162 CD33P20138 364 aa8.04□□□□□ -1.12
DDB1-221ENST00000543162 TFPI2P48307 235 aa8.04□□□□□ -1.12
DDB1-221ENST00000543162 RIPPLY3P57055 190 aa8.04□□□□□ -1.12
DDB1-221ENST00000543162 CD81P60033 236 aa8.04□□□□□ -1.12
DDB1-221ENST00000543162 CD300EQ496F6 205 aaPredicted RBP8.04□□□□□ -1.12
DDB1-221ENST00000543162 IGFL4Q6B9Z1 124 aa8.04□□□□□ -1.12
DDB1-221ENST00000543162 WFDC3Q8IUB2 231 aa8.04□□□□□ -1.12
DDB1-221ENST00000543162 CCDC28AQ8IWP9 274 aa8.04□□□□□ -1.12
DDB1-221ENST00000543162 TMEM61Q8N0U2 210 aa8.04□□□□□ -1.12
DDB1-221ENST00000543162 CMTM2Q8TAZ6 248 aa8.04□□□□□ -1.12
DDB1-221ENST00000543162 MDFIQ99750 246 aa8.04□□□□□ -1.12
DDB1-221ENST00000543162 TRAV8-2A0A0B4J237 113 aa8.03□□□□□ -1.12
DDB1-221ENST00000543162 TRAV25A0A0B4J276 109 aa8.03□□□□□ -1.12
DDB1-221ENST00000543162 C9JQL5 133 aa8.03□□□□□ -1.12
DDB1-221ENST00000543162 ISLRO14498 428 aa8.03□□□□□ -1.12
DDB1-221ENST00000543162 SOCS3O14543 225 aa8.03□□□□□ -1.12
DDB1-221ENST00000543162 TSPAN4O14817 238 aa8.03□□□□□ -1.12
DDB1-221ENST00000543162 SRP19P09132 144 aaKnown RBP8.03□□□□□ -1.12
DDB1-221ENST00000543162 ID1P41134 155 aa8.03□□□□□ -1.12
DDB1-221ENST00000543162 RNF182Q8N6D2 247 aa8.03□□□□□ -1.12
DDB1-221ENST00000543162 C5orf17Q8NAS9 161 aa8.03□□□□□ -1.12
DDB1-221ENST00000543162 DCANP1Q8TF63 244 aa8.03□□□□□ -1.12
DDB1-221ENST00000543162 TCEAL7Q9BRU2 100 aa8.03□□□□□ -1.12
DDB1-221ENST00000543162 SLC35B3Q9H1N7 401 aa8.03□□□□□ -1.12
DDB1-221ENST00000543162 CLEC5AQ9NY25 188 aa8.03□□□□□ -1.12
DDB1-221ENST00000543162 PRELID1Q9Y255 219 aa8.03□□□□□ -1.12
DDB1-221ENST00000543162 TRAV2A0A0B4J234 112 aa8.02□□□□□ -1.13
DDB1-221ENST00000543162 SCO2A0A1W2PP80 73 aa8.02□□□□□ -1.13
DDB1-221ENST00000543162 TMEM250H0YL14 139 aa8.02□□□□□ -1.13
DDB1-221ENST00000543162 K7EQG2 157 aa8.02□□□□□ -1.13
DDB1-221ENST00000543162 M0R3E3 92 aa8.02□□□□□ -1.13
DDB1-221ENST00000543162 NDUFS6O75380 124 aaKnown RBP8.02□□□□□ -1.13
DDB1-221ENST00000543162 IGLV1-51P01701 117 aa8.02□□□□□ -1.13
DDB1-221ENST00000543162 HLA-DMBP28068 263 aa8.02□□□□□ -1.13
DDB1-221ENST00000543162 CSN1S1P47710 185 aa8.02□□□□□ -1.13
DDB1-221ENST00000543162 INSL3P51460 131 aa8.02□□□□□ -1.13
DDB1-221ENST00000543162 CEBPGP53567 150 aa8.02□□□□□ -1.13
DDB1-221ENST00000543162 GNG5P63218 68 aa8.02□□□□□ -1.13
DDB1-221ENST00000543162 C9orf66Q5T8R8 295 aa8.02□□□□□ -1.13
DDB1-221ENST00000543162 CYB561D1Q8N8Q1 229 aa8.02□□□□□ -1.13
DDB1-221ENST00000543162 WFDC9Q8NEX5 89 aa8.02□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 55 ms