RNA–Protein interactions for RNA: ENST00000543002.5

RABGGTA-203, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 2

Gene RABGGTA, Length 1,329 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-203ENST00000543002 HIST1H1EP10412 219 aaKnown RBP12.62□□□□□ -0.39
RABGGTA-203ENST00000543002 OR10G4Q8NGN3 311 aa12.62□□□□□ -0.39
RABGGTA-203ENST00000543002 OR10G9Q8NGN4 311 aa12.62□□□□□ -0.39
RABGGTA-203ENST00000543002 OR10G7Q8NGN6 311 aa12.62□□□□□ -0.39
RABGGTA-203ENST00000543002 LRRC20Q8TCA0 184 aa12.62□□□□□ -0.39
RABGGTA-203ENST00000543002 C20orf173Q96LM9 149 aa12.62□□□□□ -0.39
RABGGTA-203ENST00000543002 SLC50A1Q9BRV3 221 aa12.62□□□□□ -0.39
RABGGTA-203ENST00000543002 ZNF331Q9NQX6 463 aaPredicted RBP12.62□□□□□ -0.39
RABGGTA-203ENST00000543002 A0A1W2PPV4 95 aa12.62□□□□□ -0.39
RABGGTA-203ENST00000543002 PYYP10082 97 aa12.62□□□□□ -0.39
RABGGTA-203ENST00000543002 RPL35AP18077 110 aaKnown RBP12.62□□□□□ -0.39
RABGGTA-203ENST00000543002 TAS2R45P59539 299 aa12.62□□□□□ -0.39
RABGGTA-203ENST00000543002 LGALSLQ3ZCW2 172 aaPredicted RBP12.62□□□□□ -0.39
RABGGTA-203ENST00000543002 ACTL10Q5JWF8 245 aa12.62□□□□□ -0.39
RABGGTA-203ENST00000543002 IGFL4Q6B9Z1 124 aa12.62□□□□□ -0.39
RABGGTA-203ENST00000543002 FAM122CQ6P4D5 195 aa12.62□□□□□ -0.39
RABGGTA-203ENST00000543002 STHQ8IWL8 128 aa12.62□□□□□ -0.39
RABGGTA-203ENST00000543002 SAT2Q96F10 170 aaPredicted RBP12.62□□□□□ -0.39
RABGGTA-203ENST00000543002 OR51M1Q9H341 326 aa12.62□□□□□ -0.39
RABGGTA-203ENST00000543002 RPRMQ9NS64 109 aa12.62□□□□□ -0.39
RABGGTA-203ENST00000543002 ZNF586Q9NXT0 402 aa12.62□□□□□ -0.39
RABGGTA-203ENST00000543002 KIR2DL5BA0A0G2JN68 375 aa12.61□□□□□ -0.39
RABGGTA-203ENST00000543002 KIR2DL5BA0A0G2JPC4 375 aa12.61□□□□□ -0.39
RABGGTA-203ENST00000543002 H3BTX0 84 aa12.61□□□□□ -0.39
RABGGTA-203ENST00000543002 PFDN1O60925 122 aa12.61□□□□□ -0.39
RABGGTA-203ENST00000543002 ZNF253O75346 499 aa12.61□□□□□ -0.39
RABGGTA-203ENST00000543002 APOC4P55056 127 aa12.61□□□□□ -0.39
RABGGTA-203ENST00000543002 KHDC3LQ587J8 217 aa12.61□□□□□ -0.39
RABGGTA-203ENST00000543002 FOXI2Q6ZQN5 318 aa12.61□□□□□ -0.39
RABGGTA-203ENST00000543002 TRPT1Q86TN4 253 aaKnown RBP12.61□□□□□ -0.39
RABGGTA-203ENST00000543002 KIR2DL5AQ8N109 375 aa12.61□□□□□ -0.39
RABGGTA-203ENST00000543002 RPP25LQ8N5L8 163 aaKnown RBP12.61□□□□□ -0.39
RABGGTA-203ENST00000543002 RNF182Q8N6D2 247 aa12.61□□□□□ -0.39
RABGGTA-203ENST00000543002 KIR2DL5BQ8NHK3 375 aa12.61□□□□□ -0.39
RABGGTA-203ENST00000543002 TM2D3Q9BRN9 247 aa12.61□□□□□ -0.39
RABGGTA-203ENST00000543002 PAXXQ9BUH6 204 aa12.61□□□□□ -0.39
RABGGTA-203ENST00000543002 ZNF471Q9BX82 626 aaPredicted RBP12.61□□□□□ -0.39
RABGGTA-203ENST00000543002 TRBV19A0A075B6N1 114 aa12.6□□□□□ -0.39
RABGGTA-203ENST00000543002 SLC17A3O00476 420 aa12.6□□□□□ -0.39
RABGGTA-203ENST00000543002 OR7C2O60412 319 aa12.6□□□□□ -0.39
RABGGTA-203ENST00000543002 SPP1P10451 314 aa12.6□□□□□ -0.39
RABGGTA-203ENST00000543002 DEFB1P60022 68 aa12.6□□□□□ -0.39
RABGGTA-203ENST00000543002 EIF5AP63241 154 aaKnown RBP12.6□□□□□ -0.39
RABGGTA-203ENST00000543002 PSG3Q16557 428 aa12.6□□□□□ -0.39
RABGGTA-203ENST00000543002 TMEM41BQ5BJD5 291 aa12.6□□□□□ -0.39
RABGGTA-203ENST00000543002 RNF141Q8WVD5 230 aa12.6□□□□□ -0.39
RABGGTA-203ENST00000543002 ZNF503Q96F45 646 aa12.6□□□□□ -0.39
RABGGTA-203ENST00000543002 SAV1Q9H4B6 383 aaPredicted RBP12.6□□□□□ -0.39
RABGGTA-203ENST00000543002 CLEC5AQ9NY25 188 aa12.6□□□□□ -0.39
RABGGTA-203ENST00000543002 TGP01266 2768 aa12.59□□□□□ -0.39
RABGGTA-203ENST00000543002 H3BMM0 161 aa12.59□□□□□ -0.39
RABGGTA-203ENST00000543002 UBE2CO00762 179 aa12.59□□□□□ -0.39
RABGGTA-203ENST00000543002 NBEAP1P0C6P0 100 aa12.59□□□□□ -0.39
RABGGTA-203ENST00000543002 HLA-DRB4P13762 266 aa12.59□□□□□ -0.39
RABGGTA-203ENST00000543002 HLA-DMBP28068 263 aa12.59□□□□□ -0.39
RABGGTA-203ENST00000543002 CDC34P49427 236 aaPredicted RBP12.59□□□□□ -0.39
RABGGTA-203ENST00000543002 PDE6HQ13956 83 aa12.59□□□□□ -0.39
RABGGTA-203ENST00000543002 ZFP69Q49AA0 526 aa12.59□□□□□ -0.39
RABGGTA-203ENST00000543002 GDF5OSQ5U4N7 250 aa12.59□□□□□ -0.39
RABGGTA-203ENST00000543002 FXYD5Q96DB9 178 aa12.59□□□□□ -0.39
RABGGTA-203ENST00000543002 CSTL1Q9H114 145 aa12.59□□□□□ -0.39
RABGGTA-203ENST00000543002 HLA-DRB4X5D2U9 266 aa12.59□□□□□ -0.39
RABGGTA-203ENST00000543002 AGRNO00468 2067 aa12.58□□□□□ -0.4
RABGGTA-203ENST00000543002 A0A0J9YX75 114 aa12.58□□□□□ -0.4
RABGGTA-203ENST00000543002 EIF3GO75821 320 aaKnown RBP eCLIP12.58□□□□□ -0.4
RABGGTA-203ENST00000543002 NDUFB4O95168 129 aa12.58□□□□□ -0.4
RABGGTA-203ENST00000543002 OR10J4P0C629 311 aa12.58□□□□□ -0.4
RABGGTA-203ENST00000543002 EBLN2Q6P2I7 272 aa12.58□□□□□ -0.4
RABGGTA-203ENST00000543002 PQLC2Q6ZP29 291 aa12.58□□□□□ -0.4
RABGGTA-203ENST00000543002 ZNF738Q8NE65 137 aa12.58□□□□□ -0.4
RABGGTA-203ENST00000543002 BLNKQ8WV28 456 aa12.58□□□□□ -0.4
RABGGTA-203ENST00000543002 RAB24Q969Q5 203 aa12.58□□□□□ -0.4
RABGGTA-203ENST00000543002 SPATA25Q9BR10 227 aa12.58□□□□□ -0.4
RABGGTA-203ENST00000543002 ACTR3CQ9C0K3 210 aaPredicted RBP12.58□□□□□ -0.4
RABGGTA-203ENST00000543002 ZMAT4Q9H898 229 aa12.58□□□□□ -0.4
RABGGTA-203ENST00000543002 F6UB75 175 aa12.57□□□□□ -0.4
RABGGTA-203ENST00000543002 SEC11BP0C7V7 166 aa12.57□□□□□ -0.4
RABGGTA-203ENST00000543002 TPT1P13693 172 aaKnown RBP12.57□□□□□ -0.4
RABGGTA-203ENST00000543002 UBE2L3P68036 154 aaKnown RBP12.57□□□□□ -0.4
RABGGTA-203ENST00000543002 PSG9Q00887 426 aa12.57□□□□□ -0.4
RABGGTA-203ENST00000543002 AKR1C8PQ5T2L2 129 aa12.57□□□□□ -0.4
RABGGTA-203ENST00000543002 MORN3Q6PF18 240 aaPredicted RBP12.57□□□□□ -0.4
RABGGTA-203ENST00000543002 BAP18Q8IXM2 172 aa12.57□□□□□ -0.4
RABGGTA-203ENST00000543002 STOML3Q8TAV4 291 aa12.57□□□□□ -0.4
RABGGTA-203ENST00000543002 CLUHP3Q96NS8 147 aa12.57□□□□□ -0.4
RABGGTA-203ENST00000543002 COL7A1Q02388 2944 aa12.57□□□□□ -0.4
RABGGTA-203ENST00000543002 HMGB3O15347 200 aaKnown RBP12.56□□□□□ -0.4
RABGGTA-203ENST00000543002 STAG3L2P0CL84 134 aa12.56□□□□□ -0.4
RABGGTA-203ENST00000543002 STAG3L3P0CL85 134 aa12.56□□□□□ -0.4
RABGGTA-203ENST00000543002 Q6ZWC4 215 aa12.56□□□□□ -0.4
RABGGTA-203ENST00000543002 C9orf62Q8N4C0 152 aa12.56□□□□□ -0.4
RABGGTA-203ENST00000543002 RPUSD4Q96CM3 377 aaKnown RBP12.56□□□□□ -0.4
RABGGTA-203ENST00000543002 MRPL53Q96EL3 112 aaKnown RBP12.55□□□□□ -0.4
RABGGTA-203ENST00000543002 PRELID1Q9Y255 219 aa12.55□□□□□ -0.4
RABGGTA-203ENST00000543002 NBEAL2Q6ZNJ1 2754 aa12.54□□□□□ -0.4
RABGGTA-203ENST00000543002 A8MTW9 85 aa12.54□□□□□ -0.4
RABGGTA-203ENST00000543002 ZNF705FA8MVS1 300 aaPredicted RBP12.54□□□□□ -0.4
RABGGTA-203ENST00000543002 DUSP14O95147 198 aaKnown RBP12.54□□□□□ -0.4
RABGGTA-203ENST00000543002 CA1P00915 261 aaPredicted RBP12.54□□□□□ -0.4
RABGGTA-203ENST00000543002 ARL14EPLP0DKL9 152 aa12.54□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 68.3 ms