RNA–Protein interactions for RNA: ENST00000542772.1

ABCF1-207, Transcript of ATP binding cassette subfamily F member 1, humanhuman

TSL 3

Gene ABCF1, Length 223 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCF1-207ENST00000542772 PDE6HQ13956 83 aa4.38□□□□□ -1.71
ABCF1-207ENST00000542772 KHDC3LQ587J8 217 aa4.38□□□□□ -1.71
ABCF1-207ENST00000542772 SAMD13Q5VXD3 122 aa4.38□□□□□ -1.71
ABCF1-207ENST00000542772 FAM122CQ6P4D5 195 aa4.38□□□□□ -1.71
ABCF1-207ENST00000542772 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa4.38□□□□□ -1.71
ABCF1-207ENST00000542772 LRRC20Q8TCA0 184 aa4.38□□□□□ -1.71
ABCF1-207ENST00000542772 DYNLRB2Q8TF09 96 aa4.38□□□□□ -1.71
ABCF1-207ENST00000542772 PAXXQ9BUH6 204 aa4.38□□□□□ -1.71
ABCF1-207ENST00000542772 ZNF331Q9NQX6 463 aaPredicted RBP4.38□□□□□ -1.71
ABCF1-207ENST00000542772 SORL1Q92673 2214 aa4.38□□□□□ -1.71
ABCF1-207ENST00000542772 DNAH3Q8TD57 4116 aa4.37□□□□□ -1.71
ABCF1-207ENST00000542772 OR4C46A6NHA9 309 aa4.37□□□□□ -1.71
ABCF1-207ENST00000542772 A8MZ25 164 aa4.37□□□□□ -1.71
ABCF1-207ENST00000542772 DNASE2O00115 360 aaPredicted RBP4.37□□□□□ -1.71
ABCF1-207ENST00000542772 ISLRO14498 428 aa4.37□□□□□ -1.71
ABCF1-207ENST00000542772 RGS13O14921 159 aa4.37□□□□□ -1.71
ABCF1-207ENST00000542772 H2AFB1P0C5Y9 115 aa4.37□□□□□ -1.71
ABCF1-207ENST00000542772 PYYP10082 97 aa4.37□□□□□ -1.71
ABCF1-207ENST00000542772 S100A1P23297 94 aa4.37□□□□□ -1.71
ABCF1-207ENST00000542772 GCHFRP30047 84 aa4.37□□□□□ -1.71
ABCF1-207ENST00000542772 PSMB3P49720 205 aa4.37□□□□□ -1.71
ABCF1-207ENST00000542772 RPL11P62913 178 aaKnown RBP4.37□□□□□ -1.71
ABCF1-207ENST00000542772 BLOC1S1P78537 153 aa4.37□□□□□ -1.71
ABCF1-207ENST00000542772 PSG9Q00887 426 aa4.37□□□□□ -1.71
ABCF1-207ENST00000542772 LCN15Q6UWW0 184 aa4.37□□□□□ -1.71
ABCF1-207ENST00000542772 ALKAL2Q6UX46 152 aa4.37□□□□□ -1.71
ABCF1-207ENST00000542772 GBGT1Q8N5D6 347 aa4.37□□□□□ -1.71
ABCF1-207ENST00000542772 SLC50A1Q9BRV3 221 aa4.37□□□□□ -1.71
ABCF1-207ENST00000542772 TMEM167BQ9NRX6 74 aa4.37□□□□□ -1.71
ABCF1-207ENST00000542772 SELENOKQ9Y6D0 94 aa4.37□□□□□ -1.71
ABCF1-207ENST00000542772 NOTCH3Q9UM47 2321 aa4.37□□□□□ -1.71
ABCF1-207ENST00000542772 A0A1W2PRE2 83 aa4.36□□□□□ -1.71
ABCF1-207ENST00000542772 MAP1LC3B2A6NCE7 125 aa4.36□□□□□ -1.71
ABCF1-207ENST00000542772 HMGB3O15347 200 aaKnown RBP4.36□□□□□ -1.71
ABCF1-207ENST00000542772 OR7C2O60412 319 aa4.36□□□□□ -1.71
ABCF1-207ENST00000542772 EIF3GO75821 320 aaKnown RBP eCLIP4.36□□□□□ -1.71
ABCF1-207ENST00000542772 IFNA7P01567 189 aa4.36□□□□□ -1.71
ABCF1-207ENST00000542772 CD7P09564 240 aa4.36□□□□□ -1.71
ABCF1-207ENST00000542772 ARL14EPLP0DKL9 152 aa4.36□□□□□ -1.71
ABCF1-207ENST00000542772 ATF4P18848 351 aaPredicted RBP4.36□□□□□ -1.71
ABCF1-207ENST00000542772 ID1P41134 155 aa4.36□□□□□ -1.71
ABCF1-207ENST00000542772 CCL20P78556 96 aa4.36□□□□□ -1.71
ABCF1-207ENST00000542772 PSG3Q16557 428 aa4.36□□□□□ -1.71
ABCF1-207ENST00000542772 LINC00322Q6ZN03 302 aaPredicted RBP4.36□□□□□ -1.71
ABCF1-207ENST00000542772 WFDC3Q8IUB2 231 aa4.36□□□□□ -1.71
ABCF1-207ENST00000542772 CCDC28AQ8IWP9 274 aa4.36□□□□□ -1.71
ABCF1-207ENST00000542772 FAM24BQ8N5W8 94 aa4.36□□□□□ -1.71
ABCF1-207ENST00000542772 FAM213BQ8TBF2 198 aa4.36□□□□□ -1.71
ABCF1-207ENST00000542772 SFT2D1Q8WV19 159 aa4.36□□□□□ -1.71
ABCF1-207ENST00000542772 MRPL53Q96EL3 112 aaKnown RBP4.36□□□□□ -1.71
ABCF1-207ENST00000542772 C16orf92Q96LL3 132 aa4.36□□□□□ -1.71
ABCF1-207ENST00000542772 CLUHP3Q96NS8 147 aa4.36□□□□□ -1.71
ABCF1-207ENST00000542772 NKX6-2Q9C056 277 aaPredicted RBP4.36□□□□□ -1.71
ABCF1-207ENST00000542772 MAP1LC3BQ9GZQ8 125 aa4.36□□□□□ -1.71
ABCF1-207ENST00000542772 TMPRSS5Q9H3S3 457 aa4.36□□□□□ -1.71
ABCF1-207ENST00000542772 MAP6D1Q9H9H5 199 aa4.36□□□□□ -1.71
ABCF1-207ENST00000542772 PPP1R14DQ9NXH3 145 aa4.36□□□□□ -1.71
ABCF1-207ENST00000542772 PRELID1Q9Y255 219 aa4.36□□□□□ -1.71
ABCF1-207ENST00000542772 ARL2-SNX15V9GYD0 113 aa4.36□□□□□ -1.71
ABCF1-207ENST00000542772 IGKV3-7A0A075B6H7 116 aa4.35□□□□□ -1.71
ABCF1-207ENST00000542772 PGPA6NDG6 321 aa4.35□□□□□ -1.71
ABCF1-207ENST00000542772 A8MTW9 85 aa4.35□□□□□ -1.71
ABCF1-207ENST00000542772 ZNF705EA8MWA4 302 aaPredicted RBP4.35□□□□□ -1.71
ABCF1-207ENST00000542772 TEX46H3BTG2 121 aa4.35□□□□□ -1.71
ABCF1-207ENST00000542772 SLC17A3O00476 420 aa4.35□□□□□ -1.71
ABCF1-207ENST00000542772 NDUFS6O75380 124 aaKnown RBP4.35□□□□□ -1.71
ABCF1-207ENST00000542772 HBE1P02100 147 aa4.35□□□□□ -1.71
ABCF1-207ENST00000542772 OR10J4P0C629 311 aa4.35□□□□□ -1.71
ABCF1-207ENST00000542772 PPT1P50897 306 aa4.35□□□□□ -1.71
ABCF1-207ENST00000542772 FGF8P55075 233 aaPredicted RBP4.35□□□□□ -1.71
ABCF1-207ENST00000542772 SNRPD3P62318 126 aaKnown RBP4.35□□□□□ -1.71
ABCF1-207ENST00000542772 RANP62826 216 aaKnown RBP4.35□□□□□ -1.71
ABCF1-207ENST00000542772 GUCA2BQ16661 112 aa4.35□□□□□ -1.71
ABCF1-207ENST00000542772 ODF3L2Q3SX64 289 aa4.35□□□□□ -1.71
ABCF1-207ENST00000542772 FAM74A1Q5RGS3 127 aa4.35□□□□□ -1.71
ABCF1-207ENST00000542772 ZNF767PQ75MW2 155 aa4.35□□□□□ -1.71
ABCF1-207ENST00000542772 C20orf173Q96LM9 149 aa4.35□□□□□ -1.71
ABCF1-207ENST00000542772 CITED4Q96RK1 184 aa4.35□□□□□ -1.71
ABCF1-207ENST00000542772 UBQLN2Q9UHD9 624 aa4.35□□□□□ -1.71
ABCF1-207ENST00000542772 NBEAL1Q6ZS30 2694 aa4.34□□□□□ -1.71
ABCF1-207ENST00000542772 FAM74A7A6NL05 159 aa4.34□□□□□ -1.71
ABCF1-207ENST00000542772 OR11H12B2RN74 326 aa4.34□□□□□ -1.71
ABCF1-207ENST00000542772 H3BTX0 84 aa4.34□□□□□ -1.71
ABCF1-207ENST00000542772 SLC25A5P05141 298 aaKnown RBP4.34□□□□□ -1.71
ABCF1-207ENST00000542772 NMBP08949 121 aa4.34□□□□□ -1.71
ABCF1-207ENST00000542772 SNRPCP09234 159 aaKnown RBP4.34□□□□□ -1.71
ABCF1-207ENST00000542772 HLA-DMBP28068 263 aa4.34□□□□□ -1.71
ABCF1-207ENST00000542772 TFPI2P48307 235 aa4.34□□□□□ -1.71
ABCF1-207ENST00000542772 DEFB131AP59861 70 aa4.34□□□□□ -1.71
ABCF1-207ENST00000542772 CD81P60033 236 aa4.34□□□□□ -1.71
ABCF1-207ENST00000542772 SUMO1P63165 101 aaKnown RBP4.34□□□□□ -1.71
ABCF1-207ENST00000542772 UBE2L3P68036 154 aaKnown RBP4.34□□□□□ -1.71
ABCF1-207ENST00000542772 ICAM4Q14773 271 aa4.34□□□□□ -1.71
ABCF1-207ENST00000542772 IGFL4Q6B9Z1 124 aa4.34□□□□□ -1.71
ABCF1-207ENST00000542772 GTSCR1Q86UQ5 136 aa4.34□□□□□ -1.71
ABCF1-207ENST00000542772 EXOC3-AS1Q8N2X6 119 aa4.34□□□□□ -1.71
ABCF1-207ENST00000542772 RXFP4Q8TDU9 374 aa4.34□□□□□ -1.71
ABCF1-207ENST00000542772 BLNKQ8WV28 456 aa4.34□□□□□ -1.71
ABCF1-207ENST00000542772 TXNDC17Q9BRA2 123 aa4.34□□□□□ -1.71
ABCF1-207ENST00000542772 Q9H3A6 140 aa4.34□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 186.6 ms