RNA–Protein interactions for RNA: ENST00000542495.5

ATPAF1-212, Transcript of ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

TSL 2 BASIC

Gene ATPAF1, Length 1,779 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1-212ENST00000542495 SHANK2-AS3Q9BTD1 123 aa4.1□□□□□ -1.75
ATPAF1-212ENST00000542495 FBXL15Q9H469 300 aa4.1□□□□□ -1.75
ATPAF1-212ENST00000542495 RNF24Q9Y225 148 aa4.1□□□□□ -1.75
ATPAF1-212ENST00000542495 LAMTOR2Q9Y2Q5 125 aa4.1□□□□□ -1.75
ATPAF1-212ENST00000542495 ARFGEF3Q5TH69 2177 aa4.1□□□□□ -1.75
ATPAF1-212ENST00000542495 ATMQ13315 3056 aa4.1□□□□□ -1.75
ATPAF1-212ENST00000542495 BSNQ9UPA5 3926 aa4.1□□□□□ -1.75
ATPAF1-212ENST00000542495 ZNF462Q96JM2 2506 aa4.1□□□□□ -1.75
ATPAF1-212ENST00000542495 TRBV19A0A075B6N1 114 aa4.09□□□□□ -1.75
ATPAF1-212ENST00000542495 LOC102724200A0A096LPH7 203 aaPredicted RBP4.09□□□□□ -1.75
ATPAF1-212ENST00000542495 IGHV3-21A0A0B4J1V1 117 aa4.09□□□□□ -1.75
ATPAF1-212ENST00000542495 PPIAL4CA0A0B4J2A2 164 aa4.09□□□□□ -1.75
ATPAF1-212ENST00000542495 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP4.09□□□□□ -1.75
ATPAF1-212ENST00000542495 WI2-2373I1.2A0A1W2PRP0 233 aa4.09□□□□□ -1.75
ATPAF1-212ENST00000542495 H3BRN7 92 aa4.09□□□□□ -1.75
ATPAF1-212ENST00000542495 H3BTX0 84 aa4.09□□□□□ -1.75
ATPAF1-212ENST00000542495 NDUFB8O95169 186 aa4.09□□□□□ -1.75
ATPAF1-212ENST00000542495 NPSP0C0P6 89 aa4.09□□□□□ -1.75
ATPAF1-212ENST00000542495 APELAP0DMC3 54 aa4.09□□□□□ -1.75
ATPAF1-212ENST00000542495 PPIAL4GP0DN37 164 aa4.09□□□□□ -1.75
ATPAF1-212ENST00000542495 TSPOP30536 169 aa4.09□□□□□ -1.75
ATPAF1-212ENST00000542495 HNRNPA3P51991 378 aaKnown RBP4.09□□□□□ -1.75
ATPAF1-212ENST00000542495 LYZP61626 148 aa4.09□□□□□ -1.75
ATPAF1-212ENST00000542495 MAJINQ3KP22 176 aa4.09□□□□□ -1.75
ATPAF1-212ENST00000542495 FBXL19-AS1Q494R0 122 aa4.09□□□□□ -1.75
ATPAF1-212ENST00000542495 PRR30Q53SZ7 412 aaPredicted RBP4.09□□□□□ -1.75
ATPAF1-212ENST00000542495 SIGLEC15Q6ZMC9 328 aa4.09□□□□□ -1.75
ATPAF1-212ENST00000542495 Q6ZN92 141 aa4.09□□□□□ -1.75
ATPAF1-212ENST00000542495 LYPD1Q8N2G4 141 aa4.09□□□□□ -1.75
ATPAF1-212ENST00000542495 KIR3DL3Q8N743 410 aa4.09□□□□□ -1.75
ATPAF1-212ENST00000542495 STPG4Q8N801 248 aa4.09□□□□□ -1.75
ATPAF1-212ENST00000542495 TMEM75Q8N9X5 138 aa4.09□□□□□ -1.75
ATPAF1-212ENST00000542495 NPBQ8NG41 125 aa4.09□□□□□ -1.75
ATPAF1-212ENST00000542495 OR11H6Q8NGC7 330 aa4.09□□□□□ -1.75
ATPAF1-212ENST00000542495 OR2D3Q8NGH3 330 aa4.09□□□□□ -1.75
ATPAF1-212ENST00000542495 CFHR4Q92496 578 aa4.09□□□□□ -1.75
ATPAF1-212ENST00000542495 RPEQ96AT9 228 aa4.09□□□□□ -1.75
ATPAF1-212ENST00000542495 PGLYRP4Q96LB8 373 aa4.09□□□□□ -1.75
ATPAF1-212ENST00000542495 ZNF48Q96MX3 618 aaPredicted RBP4.09□□□□□ -1.75
ATPAF1-212ENST00000542495 RASL11BQ9BPW5 248 aa4.09□□□□□ -1.75
ATPAF1-212ENST00000542495 SH3BGRL2Q9UJC5 107 aa4.09□□□□□ -1.75
ATPAF1-212ENST00000542495 RPH3ALQ9UNE2 315 aa4.09□□□□□ -1.75
ATPAF1-212ENST00000542495 ZFP30Q9Y2G7 519 aa4.09□□□□□ -1.75
ATPAF1-212ENST00000542495 GOLT1BQ9Y3E0 138 aa4.09□□□□□ -1.75
ATPAF1-212ENST00000542495 PLXNB1O43157 2135 aa4.09□□□□□ -1.75
ATPAF1-212ENST00000542495 TRAV8-1A0A0A6YYK1 113 aa4.09□□□□□ -1.76
ATPAF1-212ENST00000542495 IGHV1-24A0A0C4DH33 117 aa4.09□□□□□ -1.76
ATPAF1-212ENST00000542495 LYNX1G3V0Z9 82 aa4.09□□□□□ -1.76
ATPAF1-212ENST00000542495 NDUFA3O95167 84 aa4.09□□□□□ -1.76
ATPAF1-212ENST00000542495 OR5AL1P0C617 328 aa4.09□□□□□ -1.76
ATPAF1-212ENST00000542495 LYNX1P0DP58 116 aa4.09□□□□□ -1.76
ATPAF1-212ENST00000542495 SFTPCP11686 197 aa4.09□□□□□ -1.76
ATPAF1-212ENST00000542495 IGLL1P15814 213 aa4.09□□□□□ -1.76
ATPAF1-212ENST00000542495 MALP21145 153 aa4.09□□□□□ -1.76
ATPAF1-212ENST00000542495 COX7A1P24310 79 aa4.09□□□□□ -1.76
ATPAF1-212ENST00000542495 PRB3Q04118 309 aaPredicted RBP4.09□□□□□ -1.76
ATPAF1-212ENST00000542495 GOLT1AQ6ZVE7 132 aa4.09□□□□□ -1.76
ATPAF1-212ENST00000542495 Q71RC1 249 aaPredicted RBP4.09□□□□□ -1.76
ATPAF1-212ENST00000542495 ATOH7Q8N100 152 aa4.09□□□□□ -1.76
ATPAF1-212ENST00000542495 EXOC3-AS1Q8N2X6 119 aa4.09□□□□□ -1.76
ATPAF1-212ENST00000542495 CIARTQ8N365 385 aaPredicted RBP4.09□□□□□ -1.76
ATPAF1-212ENST00000542495 ZNF491Q8N8L2 437 aa4.09□□□□□ -1.76
ATPAF1-212ENST00000542495 OR4F17Q8NGA8 305 aa4.09□□□□□ -1.76
ATPAF1-212ENST00000542495 DAZAP1Q96EP5 407 aaKnown RBP4.09□□□□□ -1.76
ATPAF1-212ENST00000542495 ZNF414Q96IQ9 312 aa4.09□□□□□ -1.76
ATPAF1-212ENST00000542495 TXN2Q99757 166 aa4.09□□□□□ -1.76
ATPAF1-212ENST00000542495 TMEM70Q9BUB7 260 aa4.09□□□□□ -1.76
ATPAF1-212ENST00000542495 KRTAP4-9Q9BYQ8 210 aa4.09□□□□□ -1.76
ATPAF1-212ENST00000542495 KRTAP4-2Q9BYR5 136 aa4.09□□□□□ -1.76
ATPAF1-212ENST00000542495 MALRD1Q5VYJ5 2156 aa4.08□□□□□ -1.76
ATPAF1-212ENST00000542495 ZGRF1Q86YA3 2104 aa4.08□□□□□ -1.76
ATPAF1-212ENST00000542495 CFAP46Q8IYW2 2715 aa4.08□□□□□ -1.76
ATPAF1-212ENST00000542495 A0A1B0GW15 77 aa4.08□□□□□ -1.76
ATPAF1-212ENST00000542495 SH2D7A6NKC9 451 aaPredicted RBP4.08□□□□□ -1.76
ATPAF1-212ENST00000542495 ODF3BA8MYP8 253 aa4.08□□□□□ -1.76
ATPAF1-212ENST00000542495 SYS1-DBNDD2H3BUS1 97 aa4.08□□□□□ -1.76
ATPAF1-212ENST00000542495 TIMM23O14925 209 aa4.08□□□□□ -1.76
ATPAF1-212ENST00000542495 LIPFP07098 398 aa4.08□□□□□ -1.76
ATPAF1-212ENST00000542495 TFPI2P48307 235 aa4.08□□□□□ -1.76
ATPAF1-212ENST00000542495 CRIP1P50238 77 aa4.08□□□□□ -1.76
ATPAF1-212ENST00000542495 BATFQ16520 125 aa4.08□□□□□ -1.76
ATPAF1-212ENST00000542495 PSG3Q16557 428 aa4.08□□□□□ -1.76
ATPAF1-212ENST00000542495 ZNF672Q499Z4 452 aaPredicted RBP4.08□□□□□ -1.76
ATPAF1-212ENST00000542495 Q56UQ5 140 aa4.08□□□□□ -1.76
ATPAF1-212ENST00000542495 COX8CQ7Z4L0 72 aa4.08□□□□□ -1.76
ATPAF1-212ENST00000542495 PRNTQ86SH4 94 aa4.08□□□□□ -1.76
ATPAF1-212ENST00000542495 BPIFA4PQ86YQ2 179 aa4.08□□□□□ -1.76
ATPAF1-212ENST00000542495 BCL6BQ8N143 479 aaPredicted RBP4.08□□□□□ -1.76
ATPAF1-212ENST00000542495 MUC15Q8N387 334 aa4.08□□□□□ -1.76
ATPAF1-212ENST00000542495 ORAOV1Q8WV07 137 aa4.08□□□□□ -1.76
ATPAF1-212ENST00000542495 ZC2HC1AQ96GY0 325 aa4.08□□□□□ -1.76
ATPAF1-212ENST00000542495 C17orf77Q96MU5 243 aa4.08□□□□□ -1.76
ATPAF1-212ENST00000542495 ST20Q9HBF5 79 aa4.08□□□□□ -1.76
ATPAF1-212ENST00000542495 C19orf73Q9NVV2 129 aa4.08□□□□□ -1.76
ATPAF1-212ENST00000542495 CLEC5AQ9NY25 188 aa4.08□□□□□ -1.76
ATPAF1-212ENST00000542495 IGLV11-55A0A075B6I3 123 aa4.07□□□□□ -1.76
ATPAF1-212ENST00000542495 TRAV30A0A087WSZ9 112 aa4.07□□□□□ -1.76
ATPAF1-212ENST00000542495 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP4.07□□□□□ -1.76
ATPAF1-212ENST00000542495 A0A1B0GUT8 65 aa4.07□□□□□ -1.76
ATPAF1-212ENST00000542495 NPIPB5A8MRT5 1133 aa4.07□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 137.3 ms