RNA–Protein interactions for RNA: ENST00000542112.5

SNHG1-219, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 3 BASIC

Gene SNHG1, Length 780 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-219ENST00000542112 PLXNB3Q9ULL4 1909 aa3.42□□□□□ -1.86
SNHG1-219ENST00000542112 TRBV6-6A0A0A6YYG2 114 aa3.42□□□□□ -1.86
SNHG1-219ENST00000542112 TRBV10-2A0A0K0K1G8 114 aa3.42□□□□□ -1.86
SNHG1-219ENST00000542112 A0A0U1RQV1 116 aa3.42□□□□□ -1.86
SNHG1-219ENST00000542112 PMS2P5A8MQ11 134 aa3.42□□□□□ -1.86
SNHG1-219ENST00000542112 H3BMM0 161 aa3.42□□□□□ -1.86
SNHG1-219ENST00000542112 K7EM74 188 aa3.42□□□□□ -1.86
SNHG1-219ENST00000542112 BCE1O60756 84 aa3.42□□□□□ -1.86
SNHG1-219ENST00000542112 PGLYRP1O75594 196 aaPredicted RBP3.42□□□□□ -1.86
SNHG1-219ENST00000542112 ARL14EPLP0DKL9 152 aa3.42□□□□□ -1.86
SNHG1-219ENST00000542112 PLNP26678 52 aa3.42□□□□□ -1.86
SNHG1-219ENST00000542112 LEPP41159 167 aa3.42□□□□□ -1.86
SNHG1-219ENST00000542112 SPINT3P49223 89 aa3.42□□□□□ -1.86
SNHG1-219ENST00000542112 CCL11P51671 97 aa3.42□□□□□ -1.86
SNHG1-219ENST00000542112 DLX1P56177 255 aa3.42□□□□□ -1.86
SNHG1-219ENST00000542112 ATP5EP56381 51 aaPredicted RBP3.42□□□□□ -1.86
SNHG1-219ENST00000542112 NPC2P61916 151 aa3.42□□□□□ -1.86
SNHG1-219ENST00000542112 RPS18P62269 152 aaKnown RBP3.42□□□□□ -1.86
SNHG1-219ENST00000542112 HIST1H4AP62805 103 aaKnown RBP3.42□□□□□ -1.86
SNHG1-219ENST00000542112 RPL18Q07020 188 aaKnown RBP3.42□□□□□ -1.86
SNHG1-219ENST00000542112 SRSF9Q13242 221 aaKnown RBP eCLIP3.42□□□□□ -1.86
SNHG1-219ENST00000542112 RIGQ13278 110 aa3.42□□□□□ -1.86
SNHG1-219ENST00000542112 OR1C1Q15619 314 aa3.42□□□□□ -1.86
SNHG1-219ENST00000542112 ATXN8Q156A1 80 aa3.42□□□□□ -1.86
SNHG1-219ENST00000542112 VMA21Q3ZAQ7 101 aa3.42□□□□□ -1.86
SNHG1-219ENST00000542112 SPANXN5Q5MJ07 72 aa3.42□□□□□ -1.86
SNHG1-219ENST00000542112 C22orf39Q6P5X5 142 aa3.42□□□□□ -1.86
SNHG1-219ENST00000542112 FAM19A1Q7Z5A9 133 aa3.42□□□□□ -1.86
SNHG1-219ENST00000542112 C5orf38Q86SI9 138 aa3.42□□□□□ -1.86
SNHG1-219ENST00000542112 STHQ8IWL8 128 aa3.42□□□□□ -1.86
SNHG1-219ENST00000542112 FGFRL1Q8N441 504 aa3.42□□□□□ -1.86
SNHG1-219ENST00000542112 SERP2Q8N6R1 65 aa3.42□□□□□ -1.86
SNHG1-219ENST00000542112 DCAF4L2Q8NA75 395 aa3.42□□□□□ -1.86
SNHG1-219ENST00000542112 PRSS3P2Q8NHM4 247 aa3.42□□□□□ -1.86
SNHG1-219ENST00000542112 UBE2WQ96B02 151 aa3.42□□□□□ -1.86
SNHG1-219ENST00000542112 RTL8AQ9BWD3 113 aa3.42□□□□□ -1.86
SNHG1-219ENST00000542112 PRRG4Q9BZD6 226 aa3.42□□□□□ -1.86
SNHG1-219ENST00000542112 RNASE7Q9H1E1 156 aaKnown RBP3.42□□□□□ -1.86
SNHG1-219ENST00000542112 PCNTO95613 3336 aa3.42□□□□□ -1.86
SNHG1-219ENST00000542112 ATG2BQ96BY7 2078 aa3.42□□□□□ -1.86
SNHG1-219ENST00000542112 TCF20Q9UGU0 1960 aaKnown RBP3.42□□□□□ -1.86
SNHG1-219ENST00000542112 TRPM6Q9BX84 2022 aa3.41□□□□□ -1.86
SNHG1-219ENST00000542112 COL4A3Q01955 1670 aa3.41□□□□□ -1.86
SNHG1-219ENST00000542112 IGKV1D-8A0A087WSZ0 117 aa3.41□□□□□ -1.86
SNHG1-219ENST00000542112 TRGV5A0A0B4J1U4 118 aa3.41□□□□□ -1.86
SNHG1-219ENST00000542112 MYBPHLA2RUH7 354 aa3.41□□□□□ -1.86
SNHG1-219ENST00000542112 SH2D7A6NKC9 451 aaPredicted RBP3.41□□□□□ -1.86
SNHG1-219ENST00000542112 HIGD1CA8MV81 97 aa3.41□□□□□ -1.86
SNHG1-219ENST00000542112 TEX22C9J3V5 150 aa3.41□□□□□ -1.86
SNHG1-219ENST00000542112 TMEM178BH3BS89 294 aa3.41□□□□□ -1.86
SNHG1-219ENST00000542112 K7ERJ3 54 aa3.41□□□□□ -1.86
SNHG1-219ENST00000542112 PRRG2O14669 202 aa3.41□□□□□ -1.86
SNHG1-219ENST00000542112 NGFP01138 241 aa3.41□□□□□ -1.86
SNHG1-219ENST00000542112 IGLV2-8P01709 118 aa3.41□□□□□ -1.86
SNHG1-219ENST00000542112 APOHP02749 345 aaPredicted RBP3.41□□□□□ -1.86
SNHG1-219ENST00000542112 CCL5P13501 91 aa3.41□□□□□ -1.86
SNHG1-219ENST00000542112 CA6P23280 308 aa3.41□□□□□ -1.86
SNHG1-219ENST00000542112 NBL1P41271 181 aa3.41□□□□□ -1.86
SNHG1-219ENST00000542112 CACNG7P62955 275 aa3.41□□□□□ -1.86
SNHG1-219ENST00000542112 CFHR3Q02985 330 aa3.41□□□□□ -1.86
SNHG1-219ENST00000542112 PMAIP1Q13794 54 aa3.41□□□□□ -1.86
SNHG1-219ENST00000542112 FHL5Q5TD97 284 aa3.41□□□□□ -1.86
SNHG1-219ENST00000542112 GDF5OSQ5U4N7 250 aa3.41□□□□□ -1.86
SNHG1-219ENST00000542112 PLPP4Q5VZY2 271 aa3.41□□□□□ -1.86
SNHG1-219ENST00000542112 Q6YL49 198 aa3.41□□□□□ -1.86
SNHG1-219ENST00000542112 SDIM1Q6ZPB5 146 aa3.41□□□□□ -1.86
SNHG1-219ENST00000542112 Q6ZQT7 251 aa3.41□□□□□ -1.86
SNHG1-219ENST00000542112 LINC00173Q6ZV60 143 aa3.41□□□□□ -1.86
SNHG1-219ENST00000542112 LINC00596Q86U02 117 aa3.41□□□□□ -1.86
SNHG1-219ENST00000542112 PCP2Q8IVA1 136 aa3.41□□□□□ -1.86
SNHG1-219ENST00000542112 SAP25Q8TEE9 199 aa3.41□□□□□ -1.86
SNHG1-219ENST00000542112 C2orf48Q96LS8 159 aa3.41□□□□□ -1.86
SNHG1-219ENST00000542112 DEFB118Q96PH6 123 aa3.41□□□□□ -1.86
SNHG1-219ENST00000542112 PRSS22Q9GZN4 317 aa3.41□□□□□ -1.86
SNHG1-219ENST00000542112 AICDAQ9GZX7 198 aa3.41□□□□□ -1.86
SNHG1-219ENST00000542112 RPP21Q9H633 154 aaKnown RBP3.41□□□□□ -1.86
SNHG1-219ENST00000542112 AAMDCQ9H7C9 122 aa3.41□□□□□ -1.86
SNHG1-219ENST00000542112 ZNF442Q9H7R0 627 aa3.41□□□□□ -1.86
SNHG1-219ENST00000542112 U3KQK5 164 aa3.41□□□□□ -1.86
SNHG1-219ENST00000542112 KIAA1549LQ6ZVL6 1849 aa3.4□□□□□ -1.86
SNHG1-219ENST00000542112 IGKV1D-42A0A075B6H8 117 aa3.4□□□□□ -1.87
SNHG1-219ENST00000542112 LOC107984156A0A0G2JMH3 177 aa3.4□□□□□ -1.87
SNHG1-219ENST00000542112 A0A0J9YW62 118 aa3.4□□□□□ -1.87
SNHG1-219ENST00000542112 TRBV6-1A0A0K0K1D8 114 aa3.4□□□□□ -1.87
SNHG1-219ENST00000542112 FAM236DA0A1B0GTK5 79 aa3.4□□□□□ -1.87
SNHG1-219ENST00000542112 C19orf71A6NCJ1 209 aa3.4□□□□□ -1.87
SNHG1-219ENST00000542112 LINC01549A6NIU2 74 aa3.4□□□□□ -1.87
SNHG1-219ENST00000542112 LINC00473A8K010 186 aa3.4□□□□□ -1.87
SNHG1-219ENST00000542112 TMEM150CB9EJG8 249 aa3.4□□□□□ -1.87
SNHG1-219ENST00000542112 H3BP45 60 aa3.4□□□□□ -1.87
SNHG1-219ENST00000542112 UPK2O00526 184 aa3.4□□□□□ -1.87
SNHG1-219ENST00000542112 CDX4O14627 284 aaPredicted RBP3.4□□□□□ -1.87
SNHG1-219ENST00000542112 BUB3O43684 328 aa3.4□□□□□ -1.87
SNHG1-219ENST00000542112 IGLV3-1P01715 115 aa3.4□□□□□ -1.87
SNHG1-219ENST00000542112 COL4A2P08572 1712 aa3.4□□□□□ -1.87
SNHG1-219ENST00000542112 FRMD6-AS1P0C7T7 363 aa3.4□□□□□ -1.87
SNHG1-219ENST00000542112 LINC00271P0C7V0 271 aa3.4□□□□□ -1.87
SNHG1-219ENST00000542112 FAM236CP0DP71 79 aa3.4□□□□□ -1.87
SNHG1-219ENST00000542112 GP9P14770 177 aa3.4□□□□□ -1.87
SNHG1-219ENST00000542112 RSPO1Q2MKA7 263 aaPredicted RBP3.4□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 78.8 ms