RNA–Protein interactions for RNA: ENST00000541586.5

CCM2-218, Transcript of CCM2 scaffold protein, humanhuman

TSL 3 BASIC

Gene CCM2, Length 1,719 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-218ENST00000541586 U3KQE9 123 aa21.21■□□□□ 0.99
CCM2-218ENST00000541586 TRRAPQ9Y4A5 3859 aa21.2■□□□□ 0.99
CCM2-218ENST00000541586 MYCNOSP40205 109 aa21.2■□□□□ 0.98
CCM2-218ENST00000541586 CLRN3Q8NCR9 226 aa21.2■□□□□ 0.98
CCM2-218ENST00000541586 C17orf77Q96MU5 243 aa21.2■□□□□ 0.98
CCM2-218ENST00000541586 DERL1Q9BUN8 251 aa21.2■□□□□ 0.98
CCM2-218ENST00000541586 ANK2Q01484 3957 aa21.19■□□□□ 0.98
CCM2-218ENST00000541586 TRBV19A0A075B6N1 114 aa21.19■□□□□ 0.98
CCM2-218ENST00000541586 IGHV3-66A0A0C4DH42 116 aa21.19■□□□□ 0.98
CCM2-218ENST00000541586 ZNF320A2RRD8 509 aa21.19■□□□□ 0.98
CCM2-218ENST00000541586 IGHV3OR16-13A0A075B7E8 117 aa21.18■□□□□ 0.98
CCM2-218ENST00000541586 IGHV3-49A0A0A0MS15 119 aa21.18■□□□□ 0.98
CCM2-218ENST00000541586 IGHV3-74A0A0B4J1X5 117 aa21.18■□□□□ 0.98
CCM2-218ENST00000541586 FAM74A3Q4VXF1 159 aa21.18■□□□□ 0.98
CCM2-218ENST00000541586 GPHB5Q86YW7 130 aa21.18■□□□□ 0.98
CCM2-218ENST00000541586 DPF1Q92782 380 aa21.18■□□□□ 0.98
CCM2-218ENST00000541586 RAX2Q96IS3 184 aa21.18■□□□□ 0.98
CCM2-218ENST00000541586 Q9H3A6 140 aa21.18■□□□□ 0.98
CCM2-218ENST00000541586 SMAD5-AS1Q9Y6J3 95 aa21.18■□□□□ 0.98
CCM2-218ENST00000541586 CCL24O00175 119 aa21.17■□□□□ 0.98
CCM2-218ENST00000541586 RPEL1Q2QD12 228 aa21.17■□□□□ 0.98
CCM2-218ENST00000541586 FAM106AQ4KMX7 169 aa21.17■□□□□ 0.98
CCM2-218ENST00000541586 C1orf194Q5T5A4 169 aa21.17■□□□□ 0.98
CCM2-218ENST00000541586 OR1N2Q8NGR9 330 aa21.17■□□□□ 0.98
CCM2-218ENST00000541586 IGHV4OR15-8A0A075B7B6 117 aa21.16■□□□□ 0.98
CCM2-218ENST00000541586 A0A087WW49 117 aa21.16■□□□□ 0.98
CCM2-218ENST00000541586 PGPA6NDG6 321 aa21.16■□□□□ 0.98
CCM2-218ENST00000541586 M0QZ24 198 aa21.16■□□□□ 0.98
CCM2-218ENST00000541586 M0R036 132 aa21.16■□□□□ 0.98
CCM2-218ENST00000541586 TVP23CQ96ET8 276 aa21.16■□□□□ 0.98
CCM2-218ENST00000541586 SLC17A3O00476 420 aa21.15■□□□□ 0.98
CCM2-218ENST00000541586 PF4P02776 101 aa21.15■□□□□ 0.98
CCM2-218ENST00000541586 GPR82Q96P67 336 aa21.15■□□□□ 0.98
CCM2-218ENST00000541586 OTORQ9NRC9 128 aa21.15■□□□□ 0.98
CCM2-218ENST00000541586 PDE6HQ13956 83 aa21.14■□□□□ 0.97
CCM2-218ENST00000541586 C2CD4CQ8TF44 421 aa21.14■□□□□ 0.97
CCM2-218ENST00000541586 SDF2L1Q9HCN8 221 aa21.14■□□□□ 0.97
CCM2-218ENST00000541586 NAT8Q9UHE5 227 aa21.14■□□□□ 0.97
CCM2-218ENST00000541586 WNK1Q9H4A3 2382 aa21.13■□□□□ 0.97
CCM2-218ENST00000541586 LINC01619G3V211 115 aa21.13■□□□□ 0.97
CCM2-218ENST00000541586 SLC25A5P05141 298 aaKnown RBP21.13■□□□□ 0.97
CCM2-218ENST00000541586 ATF4P18848 351 aaPredicted RBP21.13■□□□□ 0.97
CCM2-218ENST00000541586 TMEM241Q24JQ0 296 aa21.13■□□□□ 0.97
CCM2-218ENST00000541586 TM4SF20Q53R12 229 aa21.13■□□□□ 0.97
CCM2-218ENST00000541586 SIGLEC15Q6ZMC9 328 aa21.13■□□□□ 0.97
CCM2-218ENST00000541586 EXOC3-AS1Q8N2X6 119 aa21.13■□□□□ 0.97
CCM2-218ENST00000541586 TCEAL7Q9BRU2 100 aa21.13■□□□□ 0.97
CCM2-218ENST00000541586 DAZ1Q9NQZ3 744 aaKnown RBP21.13■□□□□ 0.97
CCM2-218ENST00000541586 EPDR1Q9UM22 224 aa21.12■□□□□ 0.97
CCM2-218ENST00000541586 RPL35P42766 123 aaKnown RBP21.12■□□□□ 0.97
CCM2-218ENST00000541586 GALR1P47211 349 aa21.12■□□□□ 0.97
CCM2-218ENST00000541586 GNG5P63218 68 aa21.12■□□□□ 0.97
CCM2-218ENST00000541586 C16orf54Q6UWD8 224 aa21.12■□□□□ 0.97
CCM2-218ENST00000541586 LYPD1Q8N2G4 141 aa21.12■□□□□ 0.97
CCM2-218ENST00000541586 K7EMT4 169 aa21.11■□□□□ 0.97
CCM2-218ENST00000541586 PEX7O00628 323 aa21.11■□□□□ 0.97
CCM2-218ENST00000541586 SLURP1P55000 103 aa21.11■□□□□ 0.97
CCM2-218ENST00000541586 C5orf17Q8NAS9 161 aa21.11■□□□□ 0.97
CCM2-218ENST00000541586 TRBV20OR9-2A0A075B6H5 130 aa21.1■□□□□ 0.97
CCM2-218ENST00000541586 HOXD3P31249 432 aaPredicted RBP21.1■□□□□ 0.97
CCM2-218ENST00000541586 PNRC1Q12796 327 aaPredicted RBP21.1■□□□□ 0.97
CCM2-218ENST00000541586 GLMPQ8WWB7 406 aa21.1■□□□□ 0.97
CCM2-218ENST00000541586 HIST1H2BAQ96A08 127 aa21.1■□□□□ 0.97
CCM2-218ENST00000541586 UFC1Q9Y3C8 167 aa21.1■□□□□ 0.97
CCM2-218ENST00000541586 DNHD1Q96M86 4753 aa21.1■□□□□ 0.97
CCM2-218ENST00000541586 A0A087X0K7 114 aa21.09■□□□□ 0.97
CCM2-218ENST00000541586 IGHV7-4-1A0A0J9YVY3 117 aa21.09■□□□□ 0.97
CCM2-218ENST00000541586 C7orf77A4D0Y5 90 aa21.09■□□□□ 0.97
CCM2-218ENST00000541586 ZNF785A8K8V0 405 aa21.09■□□□□ 0.97
CCM2-218ENST00000541586 A0A1W2PS18 150 aa21.09■□□□□ 0.97
CCM2-218ENST00000541586 HELTA6NFD8 242 aa21.09■□□□□ 0.97
CCM2-218ENST00000541586 RHEBQ15382 184 aa21.09■□□□□ 0.97
CCM2-218ENST00000541586 AKR1C3P42330 323 aa21.08■□□□□ 0.97
CCM2-218ENST00000541586 SYNJ2BPP57105 145 aa21.08■□□□□ 0.97
CCM2-218ENST00000541586 REC114Q7Z4M0 266 aa21.08■□□□□ 0.97
CCM2-218ENST00000541586 GRAMD2BQ96HH9 432 aa21.08■□□□□ 0.97
CCM2-218ENST00000541586 LINC00479Q96M42 142 aa21.08■□□□□ 0.97
CCM2-218ENST00000541586 RPS10P5Q9NQ39 176 aa21.08■□□□□ 0.97
CCM2-218ENST00000541586 RPH3ALQ9UNE2 315 aa21.08■□□□□ 0.97
CCM2-218ENST00000541586 RPL23P62829 140 aaKnown RBP21.07■□□□□ 0.96
CCM2-218ENST00000541586 PSG9Q00887 426 aa21.07■□□□□ 0.96
CCM2-218ENST00000541586 BTN1A1Q13410 526 aa21.07■□□□□ 0.96
CCM2-218ENST00000541586 ADIRFQ15847 76 aa21.07■□□□□ 0.96
CCM2-218ENST00000541586 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa21.07■□□□□ 0.96
CCM2-218ENST00000541586 SMPXQ9UHP9 88 aa21.07■□□□□ 0.96
CCM2-218ENST00000541586 ZNF253O75346 499 aa21.07■□□□□ 0.96
CCM2-218ENST00000541586 EDN2P20800 178 aa21.07■□□□□ 0.96
CCM2-218ENST00000541586 FHL3Q13643 280 aa21.07■□□□□ 0.96
CCM2-218ENST00000541586 CMTM2Q8TAZ6 248 aa21.07■□□□□ 0.96
CCM2-218ENST00000541586 ATG101Q9BSB4 218 aa21.07■□□□□ 0.96
CCM2-218ENST00000541586 RHPN1-AS1Q9BWJ2 59 aa21.07■□□□□ 0.96
CCM2-218ENST00000541586 PGPEP1LA6NFU8 196 aa21.06■□□□□ 0.96
CCM2-218ENST00000541586 LGALS9O00182 355 aa21.06■□□□□ 0.96
CCM2-218ENST00000541586 TCRAP04437 139 aa21.06■□□□□ 0.96
CCM2-218ENST00000541586 CNN1P51911 297 aaKnown RBP21.06■□□□□ 0.96
CCM2-218ENST00000541586 DLX4Q92988 240 aaPredicted RBP21.06■□□□□ 0.96
CCM2-218ENST00000541586 AAMDCQ9H7C9 122 aa21.06■□□□□ 0.96
CCM2-218ENST00000541586 TMEM213A2RRL7 107 aa21.05■□□□□ 0.96
CCM2-218ENST00000541586 C9JCJ5 164 aa21.05■□□□□ 0.96
CCM2-218ENST00000541586 CHEK1O14757 476 aa21.05■□□□□ 0.96
Retrieved 100 of 20,778 RNA–protein pairs in 146.5 ms