RNA–Protein interactions for RNA: ENST00000541366.1

COPA-205, Transcript of coatomer protein complex subunit alpha, humanhuman

TSL 2

Gene COPA, Length 616 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPA-205ENST00000541366 SNRPCP09234 159 aaKnown RBP7.97□□□□□ -1.13
COPA-205ENST00000541366 TBPP20226 339 aa7.97□□□□□ -1.13
COPA-205ENST00000541366 SMCO1Q147U7 214 aa7.97□□□□□ -1.13
COPA-205ENST00000541366 SERTAD4-AS1Q5TG53 156 aa7.97□□□□□ -1.13
COPA-205ENST00000541366 STEAP1BQ6NZ63 245 aa7.97□□□□□ -1.13
COPA-205ENST00000541366 NFE4Q86UQ8 179 aa7.97□□□□□ -1.13
COPA-205ENST00000541366 CCDC28AQ8IWP9 274 aa7.97□□□□□ -1.13
COPA-205ENST00000541366 TMEM229BQ8NBD8 167 aa7.97□□□□□ -1.13
COPA-205ENST00000541366 BPIFCQ8NFQ6 507 aa7.97□□□□□ -1.13
COPA-205ENST00000541366 YIPF6Q96EC8 236 aa7.97□□□□□ -1.13
COPA-205ENST00000541366 GPR132Q9UNW8 380 aa7.97□□□□□ -1.13
COPA-205ENST00000541366 IGLV5-52A0A0A0MRZ9 124 aa7.96□□□□□ -1.14
COPA-205ENST00000541366 PRAC2D3DTV9 90 aa7.96□□□□□ -1.14
COPA-205ENST00000541366 CCR6P51684 374 aa7.96□□□□□ -1.14
COPA-205ENST00000541366 TAS2R19P59542 299 aa7.96□□□□□ -1.14
COPA-205ENST00000541366 NCS1P62166 190 aa7.96□□□□□ -1.14
COPA-205ENST00000541366 SYT8Q8NBV8 401 aa7.96□□□□□ -1.14
COPA-205ENST00000541366 TMEM70Q9BUB7 260 aa7.96□□□□□ -1.14
COPA-205ENST00000541366 TRGV2A0A075B6R0 118 aa7.95□□□□□ -1.14
COPA-205ENST00000541366 TRAV12-3A0A0B4J271 114 aa7.95□□□□□ -1.14
COPA-205ENST00000541366 LINC00854A0A1B0GVQ3 168 aa7.95□□□□□ -1.14
COPA-205ENST00000541366 PRSS46E5RG02 174 aa7.95□□□□□ -1.14
COPA-205ENST00000541366 CFDP00746 253 aaPredicted RBP7.95□□□□□ -1.14
COPA-205ENST00000541366 ATP5IP56385 69 aaPredicted RBP7.95□□□□□ -1.14
COPA-205ENST00000541366 RAB11AP62491 216 aa7.95□□□□□ -1.14
COPA-205ENST00000541366 CCDC190Q86UF4 302 aa7.95□□□□□ -1.14
COPA-205ENST00000541366 WFDC10BQ8IUB3 73 aa7.95□□□□□ -1.14
COPA-205ENST00000541366 OR1S1Q8NH92 325 aa7.95□□□□□ -1.14
COPA-205ENST00000541366 LRRC20Q8TCA0 184 aa7.95□□□□□ -1.14
COPA-205ENST00000541366 SHANK2-AS3Q9BTD1 123 aa7.95□□□□□ -1.14
COPA-205ENST00000541366 GSN-AS1Q9NRJ2 163 aa7.95□□□□□ -1.14
COPA-205ENST00000541366 MSRB1Q9NZV6 116 aa7.95□□□□□ -1.14
COPA-205ENST00000541366 PLA2G2DQ9UNK4 145 aa7.95□□□□□ -1.14
COPA-205ENST00000541366 A0A0B4J2A0 478 aa7.94□□□□□ -1.14
COPA-205ENST00000541366 PAX4O43316 350 aa7.94□□□□□ -1.14
COPA-205ENST00000541366 IGHV3-53P01767 116 aa7.94□□□□□ -1.14
COPA-205ENST00000541366 RPL7P18124 248 aaKnown RBP7.94□□□□□ -1.14
COPA-205ENST00000541366 VBP1P61758 197 aa7.94□□□□□ -1.14
COPA-205ENST00000541366 LYPD5Q6UWN5 251 aa7.94□□□□□ -1.14
COPA-205ENST00000541366 C20orf144Q9BQM9 153 aa7.94□□□□□ -1.14
COPA-205ENST00000541366 EXTL2Q9UBQ6 330 aa7.94□□□□□ -1.14
COPA-205ENST00000541366 CACFD1Q9UGQ2 172 aa7.94□□□□□ -1.14
COPA-205ENST00000541366 SHPKQ9UHJ6 478 aa7.94□□□□□ -1.14
COPA-205ENST00000541366 HIGD1AQ9Y241 93 aa7.94□□□□□ -1.14
COPA-205ENST00000541366 ICOSQ9Y6W8 199 aa7.94□□□□□ -1.14
COPA-205ENST00000541366 A0A087X0K7 114 aa7.93□□□□□ -1.14
COPA-205ENST00000541366 TRGV1A0A0A0MS02 117 aa7.93□□□□□ -1.14
COPA-205ENST00000541366 NPIPB6E9PJ23 425 aa7.93□□□□□ -1.14
COPA-205ENST00000541366 H3BTX0 84 aa7.93□□□□□ -1.14
COPA-205ENST00000541366 ZNF324O75467 553 aaPredicted RBP7.93□□□□□ -1.14
COPA-205ENST00000541366 AKR1C1Q04828 323 aa7.93□□□□□ -1.14
COPA-205ENST00000541366 DAZ2Q13117 558 aaKnown RBP7.93□□□□□ -1.14
COPA-205ENST00000541366 LINC00467Q9BRT7 94 aa7.93□□□□□ -1.14
COPA-205ENST00000541366 FUT9Q9Y231 359 aa7.93□□□□□ -1.14
COPA-205ENST00000541366 LY96Q9Y6Y9 160 aa7.93□□□□□ -1.14
COPA-205ENST00000541366 LRCOL1A6NCL2 159 aa7.92□□□□□ -1.14
COPA-205ENST00000541366 PMS2P5A8MQ11 134 aa7.92□□□□□ -1.14
COPA-205ENST00000541366 DISC1C4P0D8 188 aa7.92□□□□□ -1.14
COPA-205ENST00000541366 MRPS12O15235 138 aaKnown RBP7.92□□□□□ -1.14
COPA-205ENST00000541366 PRAF2O60831 178 aa7.92□□□□□ -1.14
COPA-205ENST00000541366 PITX3O75364 302 aa7.92□□□□□ -1.14
COPA-205ENST00000541366 PLA2G1BP04054 148 aaKnown RBP7.92□□□□□ -1.14
COPA-205ENST00000541366 OR5G3P0C626 314 aa7.92□□□□□ -1.14
COPA-205ENST00000541366 AKR1C4P17516 323 aa7.92□□□□□ -1.14
COPA-205ENST00000541366 RAP2BP61225 183 aa7.92□□□□□ -1.14
COPA-205ENST00000541366 SURF2Q15527 256 aaPredicted RBP7.92□□□□□ -1.14
COPA-205ENST00000541366 ZBTB8BQ8NAP8 495 aaPredicted RBP7.92□□□□□ -1.14
COPA-205ENST00000541366 C11orf72Q8NBR9 251 aa7.92□□□□□ -1.14
COPA-205ENST00000541366 OR51S1Q8NGJ8 323 aa7.92□□□□□ -1.14
COPA-205ENST00000541366 DEFB104AQ8WTQ1 72 aa7.92□□□□□ -1.14
COPA-205ENST00000541366 KCNIP3Q9Y2W7 256 aa7.92□□□□□ -1.14
COPA-205ENST00000541366 TRAV9-2A0A087WT02 112 aa7.91□□□□□ -1.14
COPA-205ENST00000541366 A6NHS1 94 aa7.91□□□□□ -1.14
COPA-205ENST00000541366 H3BP45 60 aa7.91□□□□□ -1.14
COPA-205ENST00000541366 WRBO00258 174 aa7.91□□□□□ -1.14
COPA-205ENST00000541366 SLC17A3O00476 420 aa7.91□□□□□ -1.14
COPA-205ENST00000541366 IL5P05113 134 aa7.91□□□□□ -1.14
COPA-205ENST00000541366 CT45A10P0DMU9 189 aa7.91□□□□□ -1.14
COPA-205ENST00000541366 PATE2Q6UY27 113 aa7.91□□□□□ -1.14
COPA-205ENST00000541366 CYP2G1PQ6ZSU1 146 aa7.91□□□□□ -1.14
COPA-205ENST00000541366 ACOT7LQ6ZUV0 252 aa7.91□□□□□ -1.14
COPA-205ENST00000541366 ZNF431Q8TF32 576 aaPredicted RBP7.91□□□□□ -1.14
COPA-205ENST00000541366 C8orf49Q96NF6 230 aa7.91□□□□□ -1.14
COPA-205ENST00000541366 ZNF331Q9NQX6 463 aaPredicted RBP7.91□□□□□ -1.14
COPA-205ENST00000541366 KLF12Q9Y4X4 402 aa7.91□□□□□ -1.14
COPA-205ENST00000541366 SMCO3A2RU48 225 aa7.9□□□□□ -1.14
COPA-205ENST00000541366 HYPMO75409 117 aa7.9□□□□□ -1.14
COPA-205ENST00000541366 LINC00869P0C866 280 aa7.9□□□□□ -1.14
COPA-205ENST00000541366 Q9H521 79 aa7.9□□□□□ -1.14
COPA-205ENST00000541366 PKHD1L1Q86WI1 4243 aa7.89□□□□□ -1.15
COPA-205ENST00000541366 ANXA7P20073 488 aaKnown RBP7.89□□□□□ -1.15
COPA-205ENST00000541366 EVI2AP22794 236 aa7.89□□□□□ -1.15
COPA-205ENST00000541366 S100A7P31151 101 aa7.89□□□□□ -1.15
COPA-205ENST00000541366 CRYBA4P53673 196 aa7.89□□□□□ -1.15
COPA-205ENST00000541366 SPANXN5Q5MJ07 72 aa7.89□□□□□ -1.15
COPA-205ENST00000541366 MZT2AQ6P582 158 aa7.89□□□□□ -1.15
COPA-205ENST00000541366 TEPPQ6URK8 271 aa7.89□□□□□ -1.15
COPA-205ENST00000541366 CLVS1Q8IUQ0 354 aaPredicted RBP7.89□□□□□ -1.15
COPA-205ENST00000541366 NTN5Q8WTR8 489 aaPredicted RBP7.89□□□□□ -1.15
COPA-205ENST00000541366 ST6GAL2Q96JF0 529 aa7.89□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 48 ms