RNA–Protein interactions for RNA: ENST00000539506.5

SFSWAP-208, Transcript of splicing factor SWAP, humanhuman

TSL 5

Gene SFSWAP, Length 3,149 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFSWAP-208ENST00000539506 MC5RP33032 325 aa9.96□□□□□ -0.82
SFSWAP-208ENST00000539506 FOXC1Q12948 553 aa9.96□□□□□ -0.82
SFSWAP-208ENST00000539506 CDSNQ15517 529 aa9.96□□□□□ -0.82
SFSWAP-208ENST00000539506 PRSS3P2Q8NHM4 247 aa9.96□□□□□ -0.82
SFSWAP-208ENST00000539506 WIPF2Q8TF74 440 aaPredicted RBP9.96□□□□□ -0.82
SFSWAP-208ENST00000539506 C7orf71A4D174 169 aa9.96□□□□□ -0.82
SFSWAP-208ENST00000539506 FBLL1A6NHQ2 334 aaKnown RBP9.96□□□□□ -0.82
SFSWAP-208ENST00000539506 SMKR1H3BMG3 65 aa9.96□□□□□ -0.82
SFSWAP-208ENST00000539506 OR2J3O76001 311 aa9.96□□□□□ -0.82
SFSWAP-208ENST00000539506 LGALS7P47929 136 aa9.96□□□□□ -0.82
SFSWAP-208ENST00000539506 SUB1P53999 127 aaKnown RBP eCLIP9.96□□□□□ -0.82
SFSWAP-208ENST00000539506 OR1L4Q8NGR5 311 aa9.96□□□□□ -0.82
SFSWAP-208ENST00000539506 TTTY13Q9BZ97 58 aa9.96□□□□□ -0.82
SFSWAP-208ENST00000539506 SIGLEC9Q9Y336 463 aa9.96□□□□□ -0.82
SFSWAP-208ENST00000539506 IGHV3OR16-8A0A075B7F1 116 aa9.95□□□□□ -0.82
SFSWAP-208ENST00000539506 IGHV1-3A0A0C4DH29 117 aa9.95□□□□□ -0.82
SFSWAP-208ENST00000539506 TEX22C9J3V5 150 aa9.95□□□□□ -0.82
SFSWAP-208ENST00000539506 J3KRW8 73 aa9.95□□□□□ -0.82
SFSWAP-208ENST00000539506 M0R3E3 92 aa9.95□□□□□ -0.82
SFSWAP-208ENST00000539506 LY6HO94772 140 aa9.95□□□□□ -0.82
SFSWAP-208ENST00000539506 GPR183P32249 361 aa9.95□□□□□ -0.82
SFSWAP-208ENST00000539506 IFI27P40305 119 aaPredicted RBP9.95□□□□□ -0.82
SFSWAP-208ENST00000539506 SCRT2Q9NQ03 307 aa9.95□□□□□ -0.82
SFSWAP-208ENST00000539506 RALYQ9UKM9 306 aaKnown RBP9.95□□□□□ -0.82
SFSWAP-208ENST00000539506 MAP1AP78559 2803 aaPredicted RBP9.95□□□□□ -0.82
SFSWAP-208ENST00000539506 VSTM5A8MXK1 200 aa9.95□□□□□ -0.82
SFSWAP-208ENST00000539506 BUB1B-PAK6H3BSN5 160 aa9.95□□□□□ -0.82
SFSWAP-208ENST00000539506 H3BUT2 72 aa9.95□□□□□ -0.82
SFSWAP-208ENST00000539506 ZNF207O43670 478 aaKnown RBP9.95□□□□□ -0.82
SFSWAP-208ENST00000539506 TCRAP04437 139 aa9.95□□□□□ -0.82
SFSWAP-208ENST00000539506 FAM231DQ6ZW35 169 aa9.95□□□□□ -0.82
SFSWAP-208ENST00000539506 BCL6BQ8N143 479 aaPredicted RBP9.95□□□□□ -0.82
SFSWAP-208ENST00000539506 DEFB125Q8N687 156 aa9.95□□□□□ -0.82
SFSWAP-208ENST00000539506 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP9.94□□□□□ -0.82
SFSWAP-208ENST00000539506 SCNM1Q9BWG6 230 aa9.94□□□□□ -0.82
SFSWAP-208ENST00000539506 ST20Q9HBF5 79 aa9.94□□□□□ -0.82
SFSWAP-208ENST00000539506 K7ENP7 123 aa9.94□□□□□ -0.82
SFSWAP-208ENST00000539506 OR5AL1P0C617 328 aa9.94□□□□□ -0.82
SFSWAP-208ENST00000539506 COX7A1P24310 79 aa9.94□□□□□ -0.82
SFSWAP-208ENST00000539506 RPL27AP46776 148 aaKnown RBP9.94□□□□□ -0.82
SFSWAP-208ENST00000539506 RBPMS2Q6ZRY4 209 aaKnown RBP9.94□□□□□ -0.82
SFSWAP-208ENST00000539506 VPS13CQ709C8 3753 aa9.94□□□□□ -0.82
SFSWAP-208ENST00000539506 B9A039 149 aa9.93□□□□□ -0.82
SFSWAP-208ENST00000539506 BMI1P35226 326 aa9.93□□□□□ -0.82
SFSWAP-208ENST00000539506 NHLH1Q02575 133 aa9.93□□□□□ -0.82
SFSWAP-208ENST00000539506 IGFL4Q6B9Z1 124 aa9.93□□□□□ -0.82
SFSWAP-208ENST00000539506 C18orf15Q96N68 181 aa9.93□□□□□ -0.82
SFSWAP-208ENST00000539506 FBXL15Q9H469 300 aa9.93□□□□□ -0.82
SFSWAP-208ENST00000539506 INSIG2Q9Y5U4 225 aa9.93□□□□□ -0.82
SFSWAP-208ENST00000539506 ANKHD1Q8IWZ3 2542 aaKnown RBP9.93□□□□□ -0.82
SFSWAP-208ENST00000539506 TMEM213A2RRL7 107 aa9.93□□□□□ -0.82
SFSWAP-208ENST00000539506 GAGE10A6NGK3 116 aa9.93□□□□□ -0.82
SFSWAP-208ENST00000539506 KLF17Q5JT82 389 aaPredicted RBP9.93□□□□□ -0.82
SFSWAP-208ENST00000539506 PERPQ96FX8 193 aa9.93□□□□□ -0.82
SFSWAP-208ENST00000539506 THYN1Q9P016 225 aa9.93□□□□□ -0.82
SFSWAP-208ENST00000539506 IGF2RP11717 2491 aa9.93□□□□□ -0.82
SFSWAP-208ENST00000539506 HLA-DRB1P01911 266 aa9.93□□□□□ -0.82
SFSWAP-208ENST00000539506 CD3EP07766 207 aa9.93□□□□□ -0.82
SFSWAP-208ENST00000539506 NMUP48645 174 aa9.93□□□□□ -0.82
SFSWAP-208ENST00000539506 PPP1R27Q86WC6 154 aa9.93□□□□□ -0.82
SFSWAP-208ENST00000539506 NEU4Q8WWR8 484 aaPredicted RBP9.93□□□□□ -0.82
SFSWAP-208ENST00000539506 VKORC1Q9BQB6 163 aa9.93□□□□□ -0.82
SFSWAP-208ENST00000539506 MLST8Q9BVC4 326 aa9.93□□□□□ -0.82
SFSWAP-208ENST00000539506 NGBQ9NPG2 151 aa9.93□□□□□ -0.82
SFSWAP-208ENST00000539506 COL12A1Q99715 3063 aa9.92□□□□□ -0.82
SFSWAP-208ENST00000539506 ATRXP46100 2492 aa9.92□□□□□ -0.82
SFSWAP-208ENST00000539506 IGHV3-35A0A0C4DH35 117 aa9.92□□□□□ -0.82
SFSWAP-208ENST00000539506 GP9P14770 177 aa9.92□□□□□ -0.82
SFSWAP-208ENST00000539506 BPIFA4PQ86YQ2 179 aa9.92□□□□□ -0.82
SFSWAP-208ENST00000539506 TRGV9Q99603 122 aa9.92□□□□□ -0.82
SFSWAP-208ENST00000539506 FAM90A27PA6NNH2 459 aa9.92□□□□□ -0.82
SFSWAP-208ENST00000539506 C2orf91Q6ZV80 131 aa9.92□□□□□ -0.82
SFSWAP-208ENST00000539506 FA2HQ7L5A8 372 aa9.92□□□□□ -0.82
SFSWAP-208ENST00000539506 C8orf49Q96NF6 230 aa9.92□□□□□ -0.82
SFSWAP-208ENST00000539506 JMJD8Q96S16 334 aa9.92□□□□□ -0.82
SFSWAP-208ENST00000539506 AP5S1Q9NUS5 200 aa9.92□□□□□ -0.82
SFSWAP-208ENST00000539506 PPIAL4CA0A0B4J2A2 164 aa9.91□□□□□ -0.82
SFSWAP-208ENST00000539506 LY6LH3BQJ8 138 aa9.91□□□□□ -0.82
SFSWAP-208ENST00000539506 LIPFP07098 398 aa9.91□□□□□ -0.82
SFSWAP-208ENST00000539506 PPIAL4GP0DN37 164 aa9.91□□□□□ -0.82
SFSWAP-208ENST00000539506 ODF1Q14990 250 aa9.91□□□□□ -0.82
SFSWAP-208ENST00000539506 C12orf54Q6X4T0 127 aa9.91□□□□□ -0.82
SFSWAP-208ENST00000539506 ZNF785A8K8V0 405 aa9.91□□□□□ -0.82
SFSWAP-208ENST00000539506 CACNG7P62955 275 aa9.91□□□□□ -0.82
SFSWAP-208ENST00000539506 RASL11AQ6T310 242 aa9.91□□□□□ -0.82
SFSWAP-208ENST00000539506 PCP2Q8IVA1 136 aa9.91□□□□□ -0.82
SFSWAP-208ENST00000539506 AMN1Q8IY45 258 aa9.91□□□□□ -0.82
SFSWAP-208ENST00000539506 RABAC1Q9UI14 185 aa9.91□□□□□ -0.82
SFSWAP-208ENST00000539506 C19orf71A6NCJ1 209 aa9.91□□□□□ -0.82
SFSWAP-208ENST00000539506 C5orf17Q8NAS9 161 aa9.91□□□□□ -0.82
SFSWAP-208ENST00000539506 TNFRSF14Q92956 283 aa9.91□□□□□ -0.82
SFSWAP-208ENST00000539506 CLUHP3Q96NS8 147 aa9.91□□□□□ -0.82
SFSWAP-208ENST00000539506 AP1S3Q96PC3 154 aa9.91□□□□□ -0.82
SFSWAP-208ENST00000539506 PRSS22Q9GZN4 317 aa9.91□□□□□ -0.82
SFSWAP-208ENST00000539506 KLF12Q9Y4X4 402 aa9.91□□□□□ -0.82
SFSWAP-208ENST00000539506 D6R8Y8 96 aa9.9□□□□□ -0.82
SFSWAP-208ENST00000539506 LTAP01374 205 aa9.9□□□□□ -0.82
SFSWAP-208ENST00000539506 IGHV3-23P01764 117 aa9.9□□□□□ -0.82
SFSWAP-208ENST00000539506 ZNF672Q499Z4 452 aaPredicted RBP9.9□□□□□ -0.82
SFSWAP-208ENST00000539506 I3L2K1 104 aa9.9□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 146.3 ms