RNA–Protein interactions for RNA: ENST00000537047.5

CCDC7-208, Transcript of coiled-coil domain containing 7, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CCDC7, Length 657 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC7-208ENST00000537047 JPT1Q9UK76 154 aa0.2□□□□□ -2.38
CCDC7-208ENST00000537047 PYCARDQ9ULZ3 195 aa0.2□□□□□ -2.38
CCDC7-208ENST00000537047 PTPRFP10586 1907 aa0.19□□□□□ -2.38
CCDC7-208ENST00000537047 TRBV30A0A0K0K1B3 111 aa0.19□□□□□ -2.38
CCDC7-208ENST00000537047 BANF1O75531 89 aa0.19□□□□□ -2.38
CCDC7-208ENST00000537047 CRHP06850 196 aa0.19□□□□□ -2.38
CCDC7-208ENST00000537047 EIF3IQ13347 325 aaKnown RBP0.19□□□□□ -2.38
CCDC7-208ENST00000537047 LRRC18Q8N456 261 aa0.19□□□□□ -2.38
CCDC7-208ENST00000537047 OR2J1Q9GZK6 312 aa0.19□□□□□ -2.38
CCDC7-208ENST00000537047 ASCC3Q8N3C0 2202 aaKnown RBP0.19□□□□□ -2.38
CCDC7-208ENST00000537047 NUP98P52948 1817 aa0.19□□□□□ -2.38
CCDC7-208ENST00000537047 CEP164Q9UPV0 1460 aa0.18□□□□□ -2.38
CCDC7-208ENST00000537047 TRAV5A0A0B4J249 113 aa0.18□□□□□ -2.38
CCDC7-208ENST00000537047 hDV103S1A0JD37 113 aa0.18□□□□□ -2.38
CCDC7-208ENST00000537047 TMEM210A6NLX4 147 aa0.18□□□□□ -2.38
CCDC7-208ENST00000537047 G3V2T6 193 aa0.18□□□□□ -2.38
CCDC7-208ENST00000537047 LYRM1O43325 122 aa0.18□□□□□ -2.38
CCDC7-208ENST00000537047 IFNA14P01570 189 aa0.18□□□□□ -2.38
CCDC7-208ENST00000537047 S100A6P06703 90 aa0.18□□□□□ -2.38
CCDC7-208ENST00000537047 KDELR1P24390 212 aa0.18□□□□□ -2.38
CCDC7-208ENST00000537047 ZNF137PP52743 207 aa0.18□□□□□ -2.38
CCDC7-208ENST00000537047 KLRD1Q13241 179 aa0.18□□□□□ -2.38
CCDC7-208ENST00000537047 TMED2Q15363 201 aa0.18□□□□□ -2.38
CCDC7-208ENST00000537047 PPTC7Q8NI37 304 aa0.18□□□□□ -2.38
CCDC7-208ENST00000537047 ZHX1-C8orf76Q96EF9 292 aa0.18□□□□□ -2.38
CCDC7-208ENST00000537047 MAP1LC3BQ9GZQ8 125 aa0.18□□□□□ -2.38
CCDC7-208ENST00000537047 MIA2Q96PC5 1412 aa0.18□□□□□ -2.38
CCDC7-208ENST00000537047 MYLKQ15746 1914 aa0.18□□□□□ -2.38
CCDC7-208ENST00000537047 PCF11O94913 1555 aaKnown RBP0.18□□□□□ -2.38
CCDC7-208ENST00000537047 UBR2Q8IWV8 1755 aa0.17□□□□□ -2.38
CCDC7-208ENST00000537047 FRAS1Q86XX4 4008 aa0.17□□□□□ -2.38
CCDC7-208ENST00000537047 A0A096LPI6 279 aa0.17□□□□□ -2.38
CCDC7-208ENST00000537047 ZNF727A8MUV8 499 aa0.17□□□□□ -2.38
CCDC7-208ENST00000537047 C5orf67F2Z3F1 127 aa0.17□□□□□ -2.38
CCDC7-208ENST00000537047 H7C1C5 153 aa0.17□□□□□ -2.38
CCDC7-208ENST00000537047 MGAMO43451 1857 aa0.17□□□□□ -2.38
CCDC7-208ENST00000537047 IGHV3-33P01772 117 aa0.17□□□□□ -2.38
CCDC7-208ENST00000537047 APOA2P02652 100 aa0.17□□□□□ -2.38
CCDC7-208ENST00000537047 RYR1P21817 5038 aa0.17□□□□□ -2.38
CCDC7-208ENST00000537047 HSD11B1P28845 292 aa0.17□□□□□ -2.38
CCDC7-208ENST00000537047 SPINT3P49223 89 aa0.17□□□□□ -2.38
CCDC7-208ENST00000537047 TMBIM6P55061 237 aa0.17□□□□□ -2.38
CCDC7-208ENST00000537047 FXYD4P59646 89 aa0.17□□□□□ -2.38
CCDC7-208ENST00000537047 LCN6P62502 163 aa0.17□□□□□ -2.38
CCDC7-208ENST00000537047 AKR1C8PQ5T2L2 129 aa0.17□□□□□ -2.38
CCDC7-208ENST00000537047 TMEM14EPQ6UXP3 125 aa0.17□□□□□ -2.38
CCDC7-208ENST00000537047 LINC00299Q6ZSB3 139 aa0.17□□□□□ -2.38
CCDC7-208ENST00000537047 DGCR14Q96DF8 476 aaKnown RBP0.17□□□□□ -2.38
CCDC7-208ENST00000537047 PRNDQ9UKY0 176 aa0.17□□□□□ -2.38
CCDC7-208ENST00000537047 BOKQ9UMX3 212 aaPredicted RBP0.17□□□□□ -2.38
CCDC7-208ENST00000537047 PCLOQ9Y6V0 5065 aa0.17□□□□□ -2.38
CCDC7-208ENST00000537047 MYO5AQ9Y4I1 1855 aaKnown RBP0.16□□□□□ -2.38
CCDC7-208ENST00000537047 BCL9O00512 1426 aa0.16□□□□□ -2.38
CCDC7-208ENST00000537047 ADGRL3Q9HAR2 1447 aa0.16□□□□□ -2.38
CCDC7-208ENST00000537047 NUPR2A6NF83 97 aa0.16□□□□□ -2.38
CCDC7-208ENST00000537047 RIIAD1A6NNX1 92 aa0.16□□□□□ -2.38
CCDC7-208ENST00000537047 RER1O15258 196 aa0.16□□□□□ -2.38
CCDC7-208ENST00000537047 HIST1H2BKO60814 126 aa0.16□□□□□ -2.38
CCDC7-208ENST00000537047 E2F6O75461 281 aa0.16□□□□□ -2.38
CCDC7-208ENST00000537047 TRGC2P03986 189 aa0.16□□□□□ -2.38
CCDC7-208ENST00000537047 HIST1H2BJP06899 126 aa0.16□□□□□ -2.38
CCDC7-208ENST00000537047 CD14P08571 375 aa0.16□□□□□ -2.38
CCDC7-208ENST00000537047 KRTAP2-3P0C7H8 128 aa0.16□□□□□ -2.38
CCDC7-208ENST00000537047 CCL4P13236 92 aa0.16□□□□□ -2.38
CCDC7-208ENST00000537047 OGNP20774 298 aaKnown RBP0.16□□□□□ -2.38
CCDC7-208ENST00000537047 PHBP35232 272 aa0.16□□□□□ -2.38
CCDC7-208ENST00000537047 INSL3P51460 131 aa0.16□□□□□ -2.38
CCDC7-208ENST00000537047 ARPP19P56211 112 aa0.16□□□□□ -2.38
CCDC7-208ENST00000537047 GNG5P63218 68 aa0.16□□□□□ -2.38
CCDC7-208ENST00000537047 OCIAD2Q56VL3 154 aa0.16□□□□□ -2.38
CCDC7-208ENST00000537047 C6orf52Q5T4I8 152 aa0.16□□□□□ -2.38
CCDC7-208ENST00000537047 Q6ZQY7 126 aa0.16□□□□□ -2.38
CCDC7-208ENST00000537047 MALSU1Q96EH3 234 aa0.16□□□□□ -2.38
CCDC7-208ENST00000537047 KRTAP2-4Q9BYR9 128 aa0.16□□□□□ -2.38
CCDC7-208ENST00000537047 KRTAP2-1Q9BYU5 128 aa0.16□□□□□ -2.38
CCDC7-208ENST00000537047 LYRM2Q9NU23 88 aaPredicted RBP0.16□□□□□ -2.38
CCDC7-208ENST00000537047 SSR3Q9UNL2 185 aa0.16□□□□□ -2.38
CCDC7-208ENST00000537047 UNC13CQ8NB66 2214 aa0.15□□□□□ -2.38
CCDC7-208ENST00000537047 UHRF1BP1Q6BDS2 1440 aa0.15□□□□□ -2.39
CCDC7-208ENST00000537047 ERBINQ96RT1 1412 aa0.15□□□□□ -2.39
CCDC7-208ENST00000537047 ATG12O94817 140 aa0.15□□□□□ -2.39
CCDC7-208ENST00000537047 CXCL1P09341 107 aa0.15□□□□□ -2.39
CCDC7-208ENST00000537047 FREM3P0C091 2139 aa0.15□□□□□ -2.39
CCDC7-208ENST00000537047 CAPZBP47756 277 aa0.15□□□□□ -2.39
CCDC7-208ENST00000537047 TET1Q8NFU7 2136 aa0.15□□□□□ -2.39
CCDC7-208ENST00000537047 TSKUQ8WUA8 353 aa0.15□□□□□ -2.39
CCDC7-208ENST00000537047 CEP19Q96LK0 163 aa0.15□□□□□ -2.39
CCDC7-208ENST00000537047 GPX7Q96SL4 187 aaPredicted RBP0.15□□□□□ -2.39
CCDC7-208ENST00000537047 PAIP2Q9BPZ3 127 aaKnown RBP0.15□□□□□ -2.39
CCDC7-208ENST00000537047 SH3BGRL3Q9H299 93 aa0.15□□□□□ -2.39
CCDC7-208ENST00000537047 DOCK4Q8N1I0 1966 aa0.15□□□□□ -2.39
CCDC7-208ENST00000537047 COL24A1Q17RW2 1714 aa0.15□□□□□ -2.39
CCDC7-208ENST00000537047 NCAPD3P42695 1498 aa0.15□□□□□ -2.39
CCDC7-208ENST00000537047 MUC4Q99102 2169 aa0.14□□□□□ -2.39
CCDC7-208ENST00000537047 A0A0J9YY99 117 aa0.14□□□□□ -2.39
CCDC7-208ENST00000537047 C9orf170A2RU37 121 aa0.14□□□□□ -2.39
CCDC7-208ENST00000537047 GPR31O00270 319 aa0.14□□□□□ -2.39
CCDC7-208ENST00000537047 IDO1P14902 403 aa0.14□□□□□ -2.39
CCDC7-208ENST00000537047 MIR22HGQ0VDD5 57 aa0.14□□□□□ -2.39
CCDC7-208ENST00000537047 DHRS4L2Q6PKH6 230 aa0.14□□□□□ -2.39
Retrieved 100 of 20,778 RNA–protein pairs in 66.7 ms