RNA–Protein interactions for RNA: ENST00000533079.5

CAPN1-223, Transcript of calpain 1, humanhuman

TSL 3

Gene CAPN1, Length 878 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-223ENST00000533079 HERC1Q15751 4861 aa8.92□□□□□ -0.98
CAPN1-223ENST00000533079 TEX48A0A1B0GUV7 120 aa8.92□□□□□ -0.98
CAPN1-223ENST00000533079 PRSS46E5RG02 174 aa8.92□□□□□ -0.98
CAPN1-223ENST00000533079 GNG7O60262 68 aa8.92□□□□□ -0.98
CAPN1-223ENST00000533079 RPL11P62913 178 aaKnown RBP8.92□□□□□ -0.98
CAPN1-223ENST00000533079 DLK1P80370 383 aa8.92□□□□□ -0.98
CAPN1-223ENST00000533079 C2orf83Q53S99 150 aa8.92□□□□□ -0.98
CAPN1-223ENST00000533079 FAM24BQ8N5W8 94 aa8.92□□□□□ -0.98
CAPN1-223ENST00000533079 HSD17B11Q8NBQ5 300 aa8.92□□□□□ -0.98
CAPN1-223ENST00000533079 ZNF114Q8NC26 417 aa8.92□□□□□ -0.98
CAPN1-223ENST00000533079 OR2G3Q8NGZ4 309 aa8.92□□□□□ -0.98
CAPN1-223ENST00000533079 PCNPQ8WW12 178 aaKnown RBP8.92□□□□□ -0.98
CAPN1-223ENST00000533079 IGLV2-18A0A075B6J9 118 aa8.91□□□□□ -0.98
CAPN1-223ENST00000533079 IGHV3OR16-13A0A075B7E8 117 aa8.91□□□□□ -0.98
CAPN1-223ENST00000533079 IGHV3-74A0A0B4J1X5 117 aa8.91□□□□□ -0.98
CAPN1-223ENST00000533079 TEX46H3BTG2 121 aa8.91□□□□□ -0.98
CAPN1-223ENST00000533079 I3L2K1 104 aa8.91□□□□□ -0.98
CAPN1-223ENST00000533079 MPDU1O75352 247 aa8.91□□□□□ -0.98
CAPN1-223ENST00000533079 HOXA1P49639 335 aaPredicted RBP8.91□□□□□ -0.98
CAPN1-223ENST00000533079 FAM3BP58499 235 aaPredicted RBP8.91□□□□□ -0.98
CAPN1-223ENST00000533079 NUTF2P61970 127 aaKnown RBP8.91□□□□□ -0.98
CAPN1-223ENST00000533079 ERHP84090 104 aaKnown RBP8.91□□□□□ -0.98
CAPN1-223ENST00000533079 PXDC1Q5TGL8 231 aa8.91□□□□□ -0.98
CAPN1-223ENST00000533079 LILRB2Q8N423 598 aa8.91□□□□□ -0.98
CAPN1-223ENST00000533079 SLC24A4Q8NFF2 622 aa8.91□□□□□ -0.98
CAPN1-223ENST00000533079 HINT2Q9BX68 163 aa8.91□□□□□ -0.98
CAPN1-223ENST00000533079 RABAC1Q9UI14 185 aa8.91□□□□□ -0.98
CAPN1-223ENST00000533079 TRAV1-1A0A0B4J248 108 aa8.9□□□□□ -0.98
CAPN1-223ENST00000533079 A0A1W2PS18 150 aa8.9□□□□□ -0.98
CAPN1-223ENST00000533079 TMEM189A5PLL7 270 aa8.9□□□□□ -0.98
CAPN1-223ENST00000533079 KRBOX1C9JBD0 128 aa8.9□□□□□ -0.98
CAPN1-223ENST00000533079 K7EQG2 157 aa8.9□□□□□ -0.98
CAPN1-223ENST00000533079 MBP02144 154 aa8.9□□□□□ -0.98
CAPN1-223ENST00000533079 GPX4P36969 197 aaPredicted RBP8.9□□□□□ -0.98
CAPN1-223ENST00000533079 SUB1P53999 127 aaKnown RBP eCLIP8.9□□□□□ -0.98
CAPN1-223ENST00000533079 OR8G2PQ6IF36 304 aa8.9□□□□□ -0.98
CAPN1-223ENST00000533079 TMEM170AQ8WVE7 144 aa8.9□□□□□ -0.98
CAPN1-223ENST00000533079 SH3BGRL3Q9H299 93 aa8.9□□□□□ -0.98
CAPN1-223ENST00000533079 ZFAND3Q9H8U3 227 aa8.9□□□□□ -0.98
CAPN1-223ENST00000533079 WDR83OSQ9Y284 106 aa8.9□□□□□ -0.98
CAPN1-223ENST00000533079 LRP1BQ9NZR2 4599 aa8.9□□□□□ -0.99
CAPN1-223ENST00000533079 CAMLGP49069 296 aa8.89□□□□□ -0.99
CAPN1-223ENST00000533079 AKR1C8PQ5T2L2 129 aa8.89□□□□□ -0.99
CAPN1-223ENST00000533079 TOMM20LQ6UXN7 152 aa8.89□□□□□ -0.99
CAPN1-223ENST00000533079 ZNF600Q6ZNG1 722 aa8.89□□□□□ -0.99
CAPN1-223ENST00000533079 RNASEH2CQ8TDP1 164 aaKnown RBP8.89□□□□□ -0.99
CAPN1-223ENST00000533079 MISP3Q96FF7 219 aa8.89□□□□□ -0.99
CAPN1-223ENST00000533079 NEU1Q99519 415 aa8.89□□□□□ -0.99
CAPN1-223ENST00000533079 SMDT1Q9H4I9 107 aa8.89□□□□□ -0.99
CAPN1-223ENST00000533079 NPVFQ9HCQ7 196 aa8.89□□□□□ -0.99
CAPN1-223ENST00000533079 C17orf112F2Z3M2 114 aa8.88□□□□□ -0.99
CAPN1-223ENST00000533079 MT-CO2P00403 227 aa8.88□□□□□ -0.99
CAPN1-223ENST00000533079 APOHP02749 345 aaPredicted RBP8.88□□□□□ -0.99
CAPN1-223ENST00000533079 SPART-AS1P0CW21 52 aa8.88□□□□□ -0.99
CAPN1-223ENST00000533079 RNASE2P10153 161 aaKnown RBP8.88□□□□□ -0.99
CAPN1-223ENST00000533079 SNCAP37840 140 aa8.88□□□□□ -0.99
CAPN1-223ENST00000533079 NPBWR1P48145 328 aa8.88□□□□□ -0.99
CAPN1-223ENST00000533079 SPINK9Q5DT21 86 aa8.88□□□□□ -0.99
CAPN1-223ENST00000533079 ACTL10Q5JWF8 245 aa8.88□□□□□ -0.99
CAPN1-223ENST00000533079 Q6ZRG5 221 aa8.88□□□□□ -0.99
CAPN1-223ENST00000533079 STXBP6Q8NFX7 210 aa8.88□□□□□ -0.99
CAPN1-223ENST00000533079 DCANP1Q8TF63 244 aa8.88□□□□□ -0.99
CAPN1-223ENST00000533079 MBD3L1Q8WWY6 194 aa8.88□□□□□ -0.99
CAPN1-223ENST00000533079 SCRT1Q9BWW7 348 aa8.88□□□□□ -0.99
CAPN1-223ENST00000533079 CLEC5AQ9NY25 188 aa8.88□□□□□ -0.99
CAPN1-223ENST00000533079 PUS1Q9Y606 427 aaKnown RBP eCLIP8.88□□□□□ -0.99
CAPN1-223ENST00000533079 KNCNA6PVL3 124 aa8.87□□□□□ -0.99
CAPN1-223ENST00000533079 HBE1P02100 147 aa8.87□□□□□ -0.99
CAPN1-223ENST00000533079 ZNF688P0C7X2 276 aa8.87□□□□□ -0.99
CAPN1-223ENST00000533079 NPPCP23582 126 aa8.87□□□□□ -0.99
CAPN1-223ENST00000533079 TMEM182Q6ZP80 229 aaPredicted RBP8.87□□□□□ -0.99
CAPN1-223ENST00000533079 ZNF709Q8N972 641 aa8.87□□□□□ -0.99
CAPN1-223ENST00000533079 NARS2Q96I59 477 aaKnown RBP8.87□□□□□ -0.99
CAPN1-223ENST00000533079 KCNIP2Q9NS61 270 aa8.87□□□□□ -0.99
CAPN1-223ENST00000533079 IGHV3-66A0A0C4DH42 116 aa8.86□□□□□ -0.99
CAPN1-223ENST00000533079 UBE2L5PA0A1B0GUS4 154 aa8.86□□□□□ -0.99
CAPN1-223ENST00000533079 SMIM9A6NGZ8 99 aa8.86□□□□□ -0.99
CAPN1-223ENST00000533079 SCGB2A1O75556 95 aa8.86□□□□□ -0.99
CAPN1-223ENST00000533079 H2AFB1P0C5Y9 115 aa8.86□□□□□ -0.99
CAPN1-223ENST00000533079 FGF7P21781 194 aa8.86□□□□□ -0.99
CAPN1-223ENST00000533079 CRYBB3P26998 211 aa8.86□□□□□ -0.99
CAPN1-223ENST00000533079 OPRK1P41145 380 aa8.86□□□□□ -0.99
CAPN1-223ENST00000533079 RAB2AP61019 212 aa8.86□□□□□ -0.99
CAPN1-223ENST00000533079 RAB31Q13636 194 aa8.86□□□□□ -0.99
CAPN1-223ENST00000533079 TMEM144Q7Z5S9 345 aa8.86□□□□□ -0.99
CAPN1-223ENST00000533079 METTL26Q96S19 204 aa8.86□□□□□ -0.99
CAPN1-223ENST00000533079 RSG1Q9BU20 258 aa8.86□□□□□ -0.99
CAPN1-223ENST00000533079 NPCDR1Q9BY65 106 aa8.86□□□□□ -0.99
CAPN1-223ENST00000533079 SCRT2Q9NQ03 307 aa8.86□□□□□ -0.99
CAPN1-223ENST00000533079 RPRMQ9NS64 109 aa8.86□□□□□ -0.99
CAPN1-223ENST00000533079 APOBP04114 4563 aaKnown RBP8.86□□□□□ -0.99
CAPN1-223ENST00000533079 ZNF705FA8MVS1 300 aaPredicted RBP8.85□□□□□ -0.99
CAPN1-223ENST00000533079 NDUFS6O75380 124 aaKnown RBP8.85□□□□□ -0.99
CAPN1-223ENST00000533079 ZNF705DP0CH99 300 aaPredicted RBP8.85□□□□□ -0.99
CAPN1-223ENST00000533079 ZNF705BP0CI00 300 aaPredicted RBP8.85□□□□□ -0.99
CAPN1-223ENST00000533079 RPL29P47914 159 aaKnown RBP8.85□□□□□ -0.99
CAPN1-223ENST00000533079 FHITP49789 147 aa8.85□□□□□ -0.99
CAPN1-223ENST00000533079 TNP2Q05952 138 aa8.85□□□□□ -0.99
CAPN1-223ENST00000533079 TOR2AQ5JU69 321 aa8.85□□□□□ -0.99
CAPN1-223ENST00000533079 TEPPQ6URK8 271 aa8.85□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 71.4 ms