RNA–Protein interactions for RNA: ENST00000532029.6

LRRK1-208, Transcript of leucine rich repeat kinase 1, humanhuman

TSL 1 (best) BASIC

Gene LRRK1, Length 1,241 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRK1-208ENST00000532029 PRKDCP78527 4128 aaKnown RBP16.51■□□□□ 0.23
LRRK1-208ENST00000532029 RBMY1BA6NDE4 496 aaKnown RBP16.5■□□□□ 0.23
LRRK1-208ENST00000532029 RBMY1EA6NEQ0 496 aaKnown RBP16.5■□□□□ 0.23
LRRK1-208ENST00000532029 OR7C2O60412 319 aa16.5■□□□□ 0.23
LRRK1-208ENST00000532029 RBMY1DP0C7P1 496 aaKnown RBP16.5■□□□□ 0.23
LRRK1-208ENST00000532029 PYYP10082 97 aa16.5■□□□□ 0.23
LRRK1-208ENST00000532029 KHDC3LQ587J8 217 aa16.5■□□□□ 0.23
LRRK1-208ENST00000532029 SLC50A1Q9BRV3 221 aa16.5■□□□□ 0.23
LRRK1-208ENST00000532029 PAXXQ9BUH6 204 aa16.5■□□□□ 0.23
LRRK1-208ENST00000532029 H3BQ15 152 aa16.49■□□□□ 0.23
LRRK1-208ENST00000532029 H3BTX0 84 aa16.49■□□□□ 0.23
LRRK1-208ENST00000532029 HIST1H1EP10412 219 aaKnown RBP16.49■□□□□ 0.23
LRRK1-208ENST00000532029 CDC34P49427 236 aaPredicted RBP16.49■□□□□ 0.23
LRRK1-208ENST00000532029 TMEM41BQ5BJD5 291 aa16.49■□□□□ 0.23
LRRK1-208ENST00000532029 AKR1C8PQ5T2L2 129 aa16.49■□□□□ 0.23
LRRK1-208ENST00000532029 LINC00322Q6ZN03 302 aaPredicted RBP16.49■□□□□ 0.23
LRRK1-208ENST00000532029 STHQ8IWL8 128 aa16.49■□□□□ 0.23
LRRK1-208ENST00000532029 ASCL2Q99929 193 aa16.49■□□□□ 0.23
LRRK1-208ENST00000532029 RPRMQ9NS64 109 aa16.49■□□□□ 0.23
LRRK1-208ENST00000532029 TRAV8-2A0A0B4J237 113 aa16.48■□□□□ 0.23
LRRK1-208ENST00000532029 KNCNA6PVL3 124 aa16.48■□□□□ 0.23
LRRK1-208ENST00000532029 SPP1P10451 314 aa16.48■□□□□ 0.23
LRRK1-208ENST00000532029 RPL35AP18077 110 aaKnown RBP16.48■□□□□ 0.23
LRRK1-208ENST00000532029 C4BPBP20851 252 aa16.48■□□□□ 0.23
LRRK1-208ENST00000532029 ACTL10Q5JWF8 245 aa16.48■□□□□ 0.23
LRRK1-208ENST00000532029 IGFL4Q6B9Z1 124 aa16.48■□□□□ 0.23
LRRK1-208ENST00000532029 ZNF586Q9NXT0 402 aa16.48■□□□□ 0.23
LRRK1-208ENST00000532029 TPT1P13693 172 aaKnown RBP16.47■□□□□ 0.23
LRRK1-208ENST00000532029 SBSPONQ8IVN8 264 aa16.47■□□□□ 0.23
LRRK1-208ENST00000532029 RPP25LQ8N5L8 163 aaKnown RBP16.47■□□□□ 0.23
LRRK1-208ENST00000532029 RNF182Q8N6D2 247 aa16.47■□□□□ 0.23
LRRK1-208ENST00000532029 C20orf173Q96LM9 149 aa16.47■□□□□ 0.23
LRRK1-208ENST00000532029 ACTR3CQ9C0K3 210 aaPredicted RBP16.47■□□□□ 0.23
LRRK1-208ENST00000532029 ZNF331Q9NQX6 463 aaPredicted RBP16.47■□□□□ 0.23
LRRK1-208ENST00000532029 TRBV19A0A075B6N1 114 aa16.46■□□□□ 0.23
LRRK1-208ENST00000532029 ZNF253O75346 499 aa16.46■□□□□ 0.23
LRRK1-208ENST00000532029 EIF3GO75821 320 aaKnown RBP eCLIP16.46■□□□□ 0.23
LRRK1-208ENST00000532029 OR10J4P0C629 311 aa16.46■□□□□ 0.23
LRRK1-208ENST00000532029 APOC4P55056 127 aa16.46■□□□□ 0.23
LRRK1-208ENST00000532029 UBE2L3P68036 154 aaKnown RBP16.46■□□□□ 0.23
LRRK1-208ENST00000532029 HAGHQ16775 308 aa16.46■□□□□ 0.23
LRRK1-208ENST00000532029 BAP18Q8IXM2 172 aa16.46■□□□□ 0.23
LRRK1-208ENST00000532029 ZNF738Q8NE65 137 aa16.46■□□□□ 0.23
LRRK1-208ENST00000532029 BLNKQ8WV28 456 aa16.46■□□□□ 0.23
LRRK1-208ENST00000532029 RNF141Q8WVD5 230 aa16.46■□□□□ 0.23
LRRK1-208ENST00000532029 SAT2Q96F10 170 aaPredicted RBP16.46■□□□□ 0.23
LRRK1-208ENST00000532029 CLEC5AQ9NY25 188 aa16.46■□□□□ 0.23
LRRK1-208ENST00000532029 SLC17A3O00476 420 aa16.45■□□□□ 0.22
LRRK1-208ENST00000532029 NBEAP1P0C6P0 100 aa16.45■□□□□ 0.22
LRRK1-208ENST00000532029 SEC11BP0C7V7 166 aa16.45■□□□□ 0.22
LRRK1-208ENST00000532029 PDE6HQ13956 83 aa16.45■□□□□ 0.22
LRRK1-208ENST00000532029 PSG3Q16557 428 aa16.45■□□□□ 0.22
LRRK1-208ENST00000532029 EBLN2Q6P2I7 272 aa16.45■□□□□ 0.22
LRRK1-208ENST00000532029 PQLC2Q6ZP29 291 aa16.45■□□□□ 0.22
LRRK1-208ENST00000532029 FOXI2Q6ZQN5 318 aa16.45■□□□□ 0.22
LRRK1-208ENST00000532029 C9orf62Q8N4C0 152 aa16.45■□□□□ 0.22
LRRK1-208ENST00000532029 HMGB3O15347 200 aaKnown RBP16.44■□□□□ 0.22
LRRK1-208ENST00000532029 HLA-DMBP28068 263 aa16.44■□□□□ 0.22
LRRK1-208ENST00000532029 PSG9Q00887 426 aa16.44■□□□□ 0.22
LRRK1-208ENST00000532029 STOML3Q8TAV4 291 aa16.44■□□□□ 0.22
LRRK1-208ENST00000532029 RAB24Q969Q5 203 aa16.44■□□□□ 0.22
LRRK1-208ENST00000532029 FXYD5Q96DB9 178 aa16.44■□□□□ 0.22
LRRK1-208ENST00000532029 SAV1Q9H4B6 383 aaPredicted RBP16.44■□□□□ 0.22
LRRK1-208ENST00000532029 NHLRC4P0CG21 123 aaPredicted RBP16.43■□□□□ 0.22
LRRK1-208ENST00000532029 HLA-DRB4P13762 266 aa16.43■□□□□ 0.22
LRRK1-208ENST00000532029 DEFB1P60022 68 aa16.43■□□□□ 0.22
LRRK1-208ENST00000532029 TRPT1Q86TN4 253 aaKnown RBP16.43■□□□□ 0.22
LRRK1-208ENST00000532029 ZNF503Q96F45 646 aa16.43■□□□□ 0.22
LRRK1-208ENST00000532029 HLA-DRB4X5D2U9 266 aa16.43■□□□□ 0.22
LRRK1-208ENST00000532029 KIR2DL5BA0A0G2JN68 375 aa16.42■□□□□ 0.22
LRRK1-208ENST00000532029 KIR2DL5BA0A0G2JPC4 375 aa16.42■□□□□ 0.22
LRRK1-208ENST00000532029 H3BMM0 161 aa16.42■□□□□ 0.22
LRRK1-208ENST00000532029 STAG3L2P0CL84 134 aa16.42■□□□□ 0.22
LRRK1-208ENST00000532029 STAG3L3P0CL85 134 aa16.42■□□□□ 0.22
LRRK1-208ENST00000532029 SLC51BQ86UW2 128 aa16.42■□□□□ 0.22
LRRK1-208ENST00000532029 KIR2DL5AQ8N109 375 aa16.42■□□□□ 0.22
LRRK1-208ENST00000532029 KIR2DL5BQ8NHK3 375 aa16.42■□□□□ 0.22
LRRK1-208ENST00000532029 AAMDCQ9H7C9 122 aa16.42■□□□□ 0.22
LRRK1-208ENST00000532029 CTXND1A0A1B0GTU2 59 aa16.41■□□□□ 0.22
LRRK1-208ENST00000532029 F6UB75 175 aa16.41■□□□□ 0.22
LRRK1-208ENST00000532029 UBE2CO00762 179 aa16.41■□□□□ 0.22
LRRK1-208ENST00000532029 NDUFB4O95168 129 aa16.41■□□□□ 0.22
LRRK1-208ENST00000532029 GDF5OSQ5U4N7 250 aa16.41■□□□□ 0.22
LRRK1-208ENST00000532029 EIF5AL1Q6IS14 154 aaKnown RBP16.41■□□□□ 0.22
LRRK1-208ENST00000532029 CSTL1Q9H114 145 aa16.41■□□□□ 0.22
LRRK1-208ENST00000532029 ZMAT4Q9H898 229 aa16.41■□□□□ 0.22
LRRK1-208ENST00000532029 A0A0J9YX75 114 aa16.4■□□□□ 0.22
LRRK1-208ENST00000532029 UMAD1C9J7I0 102 aa16.4■□□□□ 0.22
LRRK1-208ENST00000532029 ARL14EPLP0DKL9 152 aa16.4■□□□□ 0.22
LRRK1-208ENST00000532029 NKX2-5P52952 324 aaPredicted RBP16.4■□□□□ 0.22
LRRK1-208ENST00000532029 OR4B1Q8NGF8 309 aa16.4■□□□□ 0.22
LRRK1-208ENST00000532029 TMED6Q8WW62 240 aa16.4■□□□□ 0.22
LRRK1-208ENST00000532029 RPUSD4Q96CM3 377 aaKnown RBP16.4■□□□□ 0.22
LRRK1-208ENST00000532029 SPATA25Q9BR10 227 aa16.4■□□□□ 0.22
LRRK1-208ENST00000532029 PRELID1Q9Y255 219 aa16.4■□□□□ 0.22
LRRK1-208ENST00000532029 DUSP14O95147 198 aaKnown RBP16.39■□□□□ 0.21
LRRK1-208ENST00000532029 CXorf1O96002 111 aa16.39■□□□□ 0.21
LRRK1-208ENST00000532029 MORN3Q6PF18 240 aaPredicted RBP16.39■□□□□ 0.21
LRRK1-208ENST00000532029 PHYHIPLQ96FC7 376 aa16.39■□□□□ 0.21
LRRK1-208ENST00000532029 TM2D3Q9BRN9 247 aa16.39■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 78.9 ms