RNA–Protein interactions for RNA: ENST00000531613.1

PCDHA8-202, Transcript of protocadherin alpha 8, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene PCDHA8, Length 5,260 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA8-202ENST00000531613 SHANK2-AS3Q9BTD1 123 aa14.12□□□□□ -0.15
PCDHA8-202ENST00000531613 IGHV1-69DA0A0B4J2H0 117 aa14.11□□□□□ -0.15
PCDHA8-202ENST00000531613 IGHV1-69P01742 117 aa14.11□□□□□ -0.15
PCDHA8-202ENST00000531613 PDE6HQ13956 83 aa14.11□□□□□ -0.15
PCDHA8-202ENST00000531613 MLANAQ16655 118 aa14.11□□□□□ -0.15
PCDHA8-202ENST00000531613 FAM110DQ8TAY7 271 aaPredicted RBP14.11□□□□□ -0.15
PCDHA8-202ENST00000531613 NDUFAF3Q9BU61 184 aa14.11□□□□□ -0.15
PCDHA8-202ENST00000531613 TNFSF13O75888 250 aa14.11□□□□□ -0.15
PCDHA8-202ENST00000531613 C14orf178Q8N769 122 aaPredicted RBP14.11□□□□□ -0.15
PCDHA8-202ENST00000531613 HS3ST6Q96QI5 342 aa14.11□□□□□ -0.15
PCDHA8-202ENST00000531613 TMEM238C9JI98 176 aa14.11□□□□□ -0.15
PCDHA8-202ENST00000531613 IGHV4-39P01824 125 aa14.11□□□□□ -0.15
PCDHA8-202ENST00000531613 CXCL1P09341 107 aa14.11□□□□□ -0.15
PCDHA8-202ENST00000531613 ATP6V0E1O15342 81 aa14.1□□□□□ -0.15
PCDHA8-202ENST00000531613 HIST1H2BLQ99880 126 aa14.1□□□□□ -0.15
PCDHA8-202ENST00000531613 JPT2Q9H910 190 aa14.1□□□□□ -0.15
PCDHA8-202ENST00000531613 TDGF1P3P51864 188 aa14.1□□□□□ -0.15
PCDHA8-202ENST00000531613 DEFB131AP59861 70 aa14.1□□□□□ -0.15
PCDHA8-202ENST00000531613 TMEM95Q3KNT9 176 aa14.1□□□□□ -0.15
PCDHA8-202ENST00000531613 ORAOV1Q8WV07 137 aa14.1□□□□□ -0.15
PCDHA8-202ENST00000531613 NUP35Q8NFH5 326 aa14.1□□□□□ -0.15
PCDHA8-202ENST00000531613 PLEKHB2Q96CS7 222 aa14.09□□□□□ -0.15
PCDHA8-202ENST00000531613 PROK2Q9HC23 129 aa14.09□□□□□ -0.15
PCDHA8-202ENST00000531613 GGTLC3B5MD39 225 aa14.09□□□□□ -0.15
PCDHA8-202ENST00000531613 MS4A6AQ9H2W1 248 aa14.09□□□□□ -0.15
PCDHA8-202ENST00000531613 LSM4Q9Y4Z0 139 aaKnown RBP14.09□□□□□ -0.15
PCDHA8-202ENST00000531613 OR2K2Q8NGT1 345 aa14.09□□□□□ -0.15
PCDHA8-202ENST00000531613 C1orf159Q96HA4 380 aa14.09□□□□□ -0.15
PCDHA8-202ENST00000531613 MAPK1IP1LQ8NDC0 245 aa14.09□□□□□ -0.15
PCDHA8-202ENST00000531613 NCOR1P1Q9H4R4 102 aa14.09□□□□□ -0.15
PCDHA8-202ENST00000531613 ZNRD1Q9P1U0 126 aa14.09□□□□□ -0.15
PCDHA8-202ENST00000531613 TRAV8-2A0A0B4J237 113 aa14.08□□□□□ -0.15
PCDHA8-202ENST00000531613 IGKV1-6A0A0C4DH72 117 aa14.08□□□□□ -0.15
PCDHA8-202ENST00000531613 RASL10AQ92737 203 aa14.08□□□□□ -0.15
PCDHA8-202ENST00000531613 CST9LQ9H4G1 147 aa14.08□□□□□ -0.15
PCDHA8-202ENST00000531613 FNDC1Q4ZHG4 1894 aaPredicted RBP14.08□□□□□ -0.15
PCDHA8-202ENST00000531613 GBF1Q92538 1859 aa14.08□□□□□ -0.15
PCDHA8-202ENST00000531613 FANCMQ8IYD8 2048 aa14.08□□□□□ -0.16
PCDHA8-202ENST00000531613 NDUFB8O95169 186 aa14.08□□□□□ -0.16
PCDHA8-202ENST00000531613 PCP4P48539 62 aa14.08□□□□□ -0.16
PCDHA8-202ENST00000531613 HSD52Q0P140 79 aa14.08□□□□□ -0.16
PCDHA8-202ENST00000531613 DMRTA1Q5VZB9 504 aa14.08□□□□□ -0.16
PCDHA8-202ENST00000531613 Q6ZR03 302 aa14.08□□□□□ -0.16
PCDHA8-202ENST00000531613 COL4A6Q14031 1691 aa14.08□□□□□ -0.16
PCDHA8-202ENST00000531613 IGHV2-70DA0A0C4DH43 119 aa14.08□□□□□ -0.16
PCDHA8-202ENST00000531613 SRSF4Q08170 494 aaKnown RBP14.08□□□□□ -0.16
PCDHA8-202ENST00000531613 Q96MF0 132 aa14.08□□□□□ -0.16
PCDHA8-202ENST00000531613 CSTL1Q9H114 145 aa14.07□□□□□ -0.16
PCDHA8-202ENST00000531613 M0R2P5 195 aa14.07□□□□□ -0.16
PCDHA8-202ENST00000531613 MED13LQ71F56 2210 aa14.07□□□□□ -0.16
PCDHA8-202ENST00000531613 DEFB130BP0DP73 79 aa14.07□□□□□ -0.16
PCDHA8-202ENST00000531613 DEFB130AP0DP74 79 aa14.07□□□□□ -0.16
PCDHA8-202ENST00000531613 Q86TA4 180 aa14.07□□□□□ -0.16
PCDHA8-202ENST00000531613 C11orf68Q9H3H3 251 aaKnown RBP14.07□□□□□ -0.16
PCDHA8-202ENST00000531613 COLCA2A8K830 154 aa14.07□□□□□ -0.16
PCDHA8-202ENST00000531613 J3QKU1 62 aa14.07□□□□□ -0.16
PCDHA8-202ENST00000531613 UBE2CO00762 179 aa14.07□□□□□ -0.16
PCDHA8-202ENST00000531613 BDP1A6H8Y1 2624 aa14.07□□□□□ -0.16
PCDHA8-202ENST00000531613 PAX4O43316 350 aa14.06□□□□□ -0.16
PCDHA8-202ENST00000531613 YPEL3P61236 119 aaPredicted RBP14.06□□□□□ -0.16
PCDHA8-202ENST00000531613 ERCC8Q13216 396 aa14.06□□□□□ -0.16
PCDHA8-202ENST00000531613 PHLDA1Q8WV24 401 aaPredicted RBP14.06□□□□□ -0.16
PCDHA8-202ENST00000531613 ERG28Q9UKR5 140 aa14.06□□□□□ -0.16
PCDHA8-202ENST00000531613 PSCAO43653 123 aa14.06□□□□□ -0.16
PCDHA8-202ENST00000531613 CFPP27918 469 aa14.06□□□□□ -0.16
PCDHA8-202ENST00000531613 CR1LQ2VPA4 569 aa14.06□□□□□ -0.16
PCDHA8-202ENST00000531613 LYL1P12980 280 aa14.06□□□□□ -0.16
PCDHA8-202ENST00000531613 DEFB104AQ8WTQ1 72 aa14.06□□□□□ -0.16
PCDHA8-202ENST00000531613 LOXP28300 417 aaPredicted RBP14.06□□□□□ -0.16
PCDHA8-202ENST00000531613 CFHR2P36980 270 aa14.06□□□□□ -0.16
PCDHA8-202ENST00000531613 HIST3H2BBQ8N257 126 aa14.06□□□□□ -0.16
PCDHA8-202ENST00000531613 ZNF479Q96JC4 524 aa14.06□□□□□ -0.16
PCDHA8-202ENST00000531613 TMEM14BQ9NUH8 114 aa14.06□□□□□ -0.16
PCDHA8-202ENST00000531613 FAM208BQ5VWN6 2430 aa14.05□□□□□ -0.16
PCDHA8-202ENST00000531613 TTC28Q96AY4 2481 aa14.05□□□□□ -0.16
PCDHA8-202ENST00000531613 C6orf226Q5I0X4 101 aa14.05□□□□□ -0.16
PCDHA8-202ENST00000531613 NBL1P41271 181 aa14.05□□□□□ -0.16
PCDHA8-202ENST00000531613 PRR31Q5SQ13 230 aa14.05□□□□□ -0.16
PCDHA8-202ENST00000531613 LIME1Q9H400 295 aa14.05□□□□□ -0.16
PCDHA8-202ENST00000531613 TRAV16A0A0A6YYK6 109 aaPredicted RBP14.05□□□□□ -0.16
PCDHA8-202ENST00000531613 AMBPP02760 352 aa14.05□□□□□ -0.16
PCDHA8-202ENST00000531613 FNDC4Q9H6D8 234 aaPredicted RBP14.05□□□□□ -0.16
PCDHA8-202ENST00000531613 A0A087WWL8 130 aa14.04□□□□□ -0.16
PCDHA8-202ENST00000531613 LINC01619G3V211 115 aa14.04□□□□□ -0.16
PCDHA8-202ENST00000531613 ARMS2P0C7Q2 107 aa14.04□□□□□ -0.16
PCDHA8-202ENST00000531613 NDUFA4L2Q9NRX3 87 aa14.04□□□□□ -0.16
PCDHA8-202ENST00000531613 ARTNQ5T4W7 220 aa14.04□□□□□ -0.16
PCDHA8-202ENST00000531613 ZNF833PQ6ZTB9 187 aa14.04□□□□□ -0.16
PCDHA8-202ENST00000531613 PLXNA3P51805 1871 aa14.03□□□□□ -0.16
PCDHA8-202ENST00000531613 G3V318 75 aa14.03□□□□□ -0.16
PCDHA8-202ENST00000531613 ATXN8Q156A1 80 aa14.03□□□□□ -0.16
PCDHA8-202ENST00000531613 A0A1B0GV72 72 aa14.03□□□□□ -0.16
PCDHA8-202ENST00000531613 J3QLI3 93 aa14.03□□□□□ -0.16
PCDHA8-202ENST00000531613 IGLV1-44P01699 117 aa14.03□□□□□ -0.16
PCDHA8-202ENST00000531613 DMRTC2Q8IXT2 367 aaPredicted RBP14.03□□□□□ -0.16
PCDHA8-202ENST00000531613 AMN1Q8IY45 258 aa14.03□□□□□ -0.16
PCDHA8-202ENST00000531613 TMEM158Q8WZ71 300 aa14.03□□□□□ -0.16
PCDHA8-202ENST00000531613 IL17RELQ6ZVW7 336 aa14.02□□□□□ -0.16
PCDHA8-202ENST00000531613 FAM215AQ9Y5M1 114 aa14.02□□□□□ -0.16
PCDHA8-202ENST00000531613 SPOCK3Q9BQ16 436 aa14.02□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 9.5 ms