RNA–Protein interactions for RNA: ENST00000531551.5

CTSB-222, Transcript of cathepsin B, human

TSL 1 (best)

Gene CTSB, Length 1,855 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CTSB-222	ENST00000531551	FXYD5	Q96DB9	178 aa		13.25	□□□□□ -0.29
CTSB-222	ENST00000531551	SPAG8	Q99932	426 aa	Predicted RBP	13.25	□□□□□ -0.29
CTSB-222	ENST00000531551	TMPRSS5	Q9H3S3	457 aa		13.25	□□□□□ -0.29
CTSB-222	ENST00000531551	PKD1L1	Q8TDX9	2849 aa		13.25	□□□□□ -0.29
CTSB-222	ENST00000531551	NBEAP1	P0C6P0	100 aa		13.25	□□□□□ -0.29
CTSB-222	ENST00000531551	GCHFR	P30047	84 aa		13.25	□□□□□ -0.29
CTSB-222	ENST00000531551	MBD3L1	Q8WWY6	194 aa		13.25	□□□□□ -0.29
CTSB-222	ENST00000531551	C16orf92	Q96LL3	132 aa		13.25	□□□□□ -0.29
CTSB-222	ENST00000531551	IGFL4	Q6B9Z1	124 aa		13.24	□□□□□ -0.29
CTSB-222	ENST00000531551	NOTCH3	Q9UM47	2321 aa		13.24	□□□□□ -0.29
CTSB-222	ENST00000531551		A0A087X0K7	114 aa		13.23	□□□□□ -0.29
CTSB-222	ENST00000531551	OR4C46	A6NHA9	309 aa		13.23	□□□□□ -0.29
CTSB-222	ENST00000531551	DCANP1	Q8TF63	244 aa		13.23	□□□□□ -0.29
CTSB-222	ENST00000531551	TRBV19	A0A075B6N1	114 aa		13.23	□□□□□ -0.29
CTSB-222	ENST00000531551	TEX46	H3BTG2	121 aa		13.23	□□□□□ -0.29
CTSB-222	ENST00000531551	SLC17A3	O00476	420 aa		13.23	□□□□□ -0.29
CTSB-222	ENST00000531551	MEOX2	P50222	304 aa		13.23	□□□□□ -0.29
CTSB-222	ENST00000531551	BLOC1S1	P78537	153 aa		13.23	□□□□□ -0.29
CTSB-222	ENST00000531551	IFITM2	Q01629	132 aa		13.23	□□□□□ -0.29
CTSB-222	ENST00000531551	GUK1	Q16774	197 aa		13.23	□□□□□ -0.29
CTSB-222	ENST00000531551	FAM24B	Q8N5W8	94 aa		13.23	□□□□□ -0.29
CTSB-222	ENST00000531551	TMEM167B	Q9NRX6	74 aa		13.23	□□□□□ -0.29
CTSB-222	ENST00000531551	WIPF1	O43516	503 aa		13.22	□□□□□ -0.29
CTSB-222	ENST00000531551	RAN	P62826	216 aa	Known RBP	13.22	□□□□□ -0.29
CTSB-222	ENST00000531551	SAMD5	Q5TGI4	173 aa		13.22	□□□□□ -0.29
CTSB-222	ENST00000531551	LINC00052	Q96N35	136 aa		13.22	□□□□□ -0.29
CTSB-222	ENST00000531551		K7EQG2	157 aa		13.21	□□□□□ -0.29
CTSB-222	ENST00000531551	HBE1	P02100	147 aa		13.21	□□□□□ -0.29
CTSB-222	ENST00000531551	ZNF688	P0C7X2	276 aa		13.21	□□□□□ -0.29
CTSB-222	ENST00000531551	SAT2	Q96F10	170 aa	Predicted RBP	13.21	□□□□□ -0.29
CTSB-222	ENST00000531551	ZNF256	Q9Y2P7	627 aa	Predicted RBP	13.21	□□□□□ -0.29
CTSB-222	ENST00000531551	ID1	P41134	155 aa		13.21	□□□□□ -0.3
CTSB-222	ENST00000531551	UBE2G2	P60604	165 aa		13.21	□□□□□ -0.3
CTSB-222	ENST00000531551	RNF182	Q8N6D2	247 aa		13.21	□□□□□ -0.3
CTSB-222	ENST00000531551	SOCS3	O14543	225 aa		13.2	□□□□□ -0.3
CTSB-222	ENST00000531551	HLA-DMB	P28068	263 aa		13.2	□□□□□ -0.3
CTSB-222	ENST00000531551	SNRPD3	P62318	126 aa	Known RBP	13.2	□□□□□ -0.3
CTSB-222	ENST00000531551	CCL20	P78556	96 aa		13.2	□□□□□ -0.3
CTSB-222	ENST00000531551	EXOC3-AS1	Q8N2X6	119 aa		13.2	□□□□□ -0.3
CTSB-222	ENST00000531551	SLC50A1	Q9BRV3	221 aa		13.2	□□□□□ -0.3
CTSB-222	ENST00000531551	ZNF331	Q9NQX6	463 aa	Predicted RBP	13.2	□□□□□ -0.3
CTSB-222	ENST00000531551	TRAV2	A0A0B4J234	112 aa		13.19	□□□□□ -0.3
CTSB-222	ENST00000531551	TRAV8-2	A0A0B4J237	113 aa		13.19	□□□□□ -0.3
CTSB-222	ENST00000531551	NDUFB4	O95168	129 aa		13.19	□□□□□ -0.3
CTSB-222	ENST00000531551	CD7	P09564	240 aa		13.19	□□□□□ -0.3
CTSB-222	ENST00000531551	PRB4	P10163	310 aa	Predicted RBP	13.19	□□□□□ -0.3
CTSB-222	ENST00000531551	CD81	P60033	236 aa		13.19	□□□□□ -0.3
CTSB-222	ENST00000531551	KRTAP10-11	P60412	298 aa		13.19	□□□□□ -0.3
CTSB-222	ENST00000531551	PDE6H	Q13956	83 aa		13.19	□□□□□ -0.3
CTSB-222	ENST00000531551	PSMG4	Q5JS54	123 aa		13.19	□□□□□ -0.3
CTSB-222	ENST00000531551	ZNF767P	Q75MW2	155 aa		13.19	□□□□□ -0.3
CTSB-222	ENST00000531551	GTSCR1	Q86UQ5	136 aa		13.19	□□□□□ -0.3
CTSB-222	ENST00000531551	PRR25	Q96S07	402 aa		13.19	□□□□□ -0.3
CTSB-222	ENST00000531551	ISLR	O14498	428 aa		13.19	□□□□□ -0.3
CTSB-222	ENST00000531551	PSMB3	P49720	205 aa		13.19	□□□□□ -0.3
CTSB-222	ENST00000531551	RAB14	P61106	215 aa		13.19	□□□□□ -0.3
CTSB-222	ENST00000531551	PSG9	Q00887	426 aa		13.19	□□□□□ -0.3
CTSB-222	ENST00000531551	BEAN1	Q3B7T3	259 aa		13.19	□□□□□ -0.3
CTSB-222	ENST00000531551	SAMD13	Q5VXD3	122 aa		13.19	□□□□□ -0.3
CTSB-222	ENST00000531551	AAMDC	Q9H7C9	122 aa		13.19	□□□□□ -0.3
CTSB-222	ENST00000531551	TRAV1-1	A0A0B4J248	108 aa		13.18	□□□□□ -0.3
CTSB-222	ENST00000531551	DEFB131A	P59861	70 aa		13.18	□□□□□ -0.3
CTSB-222	ENST00000531551	ICAM4	Q14773	271 aa		13.18	□□□□□ -0.3
CTSB-222	ENST00000531551		Q9H3A6	140 aa		13.18	□□□□□ -0.3
CTSB-222	ENST00000531551	GNG13	Q9P2W3	67 aa		13.18	□□□□□ -0.3
CTSB-222	ENST00000531551	ZMAT5	Q9UDW3	170 aa	Known RBP	13.18	□□□□□ -0.3
CTSB-222	ENST00000531551	ZNF253	O75346	499 aa		13.17	□□□□□ -0.3
CTSB-222	ENST00000531551	EGFEM1P	Q0D2K5	195 aa		13.17	□□□□□ -0.3
CTSB-222	ENST00000531551	SUN5	Q8TC36	379 aa		13.17	□□□□□ -0.3
CTSB-222	ENST00000531551	C20orf173	Q96LM9	149 aa		13.17	□□□□□ -0.3
CTSB-222	ENST00000531551	MAP6D1	Q9H9H5	199 aa		13.16	□□□□□ -0.3
CTSB-222	ENST00000531551	PGP	A6NDG6	321 aa		13.16	□□□□□ -0.3
CTSB-222	ENST00000531551	OR11H12	B2RN74	326 aa		13.16	□□□□□ -0.3
CTSB-222	ENST00000531551		M0R3E3	92 aa		13.16	□□□□□ -0.3
CTSB-222	ENST00000531551	NMB	P08949	121 aa		13.16	□□□□□ -0.3
CTSB-222	ENST00000531551	ODF3L2	Q3SX64	289 aa		13.16	□□□□□ -0.3
CTSB-222	ENST00000531551	CST9LP1	Q5W188	147 aa		13.16	□□□□□ -0.3
CTSB-222	ENST00000531551	APRG1	Q8IVJ8	170 aa		13.16	□□□□□ -0.3
CTSB-222	ENST00000531551	ZNF738	Q8NE65	137 aa		13.16	□□□□□ -0.3
CTSB-222	ENST00000531551	YTHDF2	Q9Y5A9	579 aa	Known RBP	13.16	□□□□□ -0.3
CTSB-222	ENST00000531551	ZNF705F	A8MVS1	300 aa	Predicted RBP	13.15	□□□□□ -0.3
CTSB-222	ENST00000531551	PAGE4	O60829	102 aa		13.15	□□□□□ -0.3
CTSB-222	ENST00000531551	DEFB1	P60022	68 aa		13.15	□□□□□ -0.3
CTSB-222	ENST00000531551	ZNF124	Q15973	351 aa		13.15	□□□□□ -0.3
CTSB-222	ENST00000531551	PSG3	Q16557	428 aa		13.15	□□□□□ -0.3
CTSB-222	ENST00000531551	WFDC10A	Q9H1F0	79 aa		13.15	□□□□□ -0.3
CTSB-222	ENST00000531551	RPH3AL	Q9UNE2	315 aa		13.15	□□□□□ -0.3
CTSB-222	ENST00000531551	PPT1	P50897	306 aa		13.14	□□□□□ -0.31
CTSB-222	ENST00000531551	SUMO1	P63165	101 aa	Known RBP	13.14	□□□□□ -0.31
CTSB-222	ENST00000531551	LYPD1	Q8N2G4	141 aa		13.14	□□□□□ -0.31
CTSB-222	ENST00000531551	OTOR	Q9NRC9	128 aa		13.14	□□□□□ -0.31
CTSB-222	ENST00000531551		A0A1W2PRE2	83 aa		13.14	□□□□□ -0.31
CTSB-222	ENST00000531551	FAM74A7	A6NL05	159 aa		13.14	□□□□□ -0.31
CTSB-222	ENST00000531551	HAGH	Q16775	308 aa		13.14	□□□□□ -0.31
CTSB-222	ENST00000531551	CMTM2	Q8TAZ6	248 aa		13.14	□□□□□ -0.31
CTSB-222	ENST00000531551	IFNA1	P01562	189 aa		13.13	□□□□□ -0.31
CTSB-222	ENST00000531551	PRB2	P02812	416 aa	Predicted RBP	13.13	□□□□□ -0.31
CTSB-222	ENST00000531551	SLC25A5	P05141	298 aa	Known RBP	13.13	□□□□□ -0.31
CTSB-222	ENST00000531551	CMC4	P56277	68 aa	Predicted RBP	13.13	□□□□□ -0.31
CTSB-222	ENST00000531551	LYPD6B	Q8NI32	183 aa		13.13	□□□□□ -0.31

Retrieved 100 of 20,778 RNA–protein pairs in 117.7 ms