RNA–Protein interactions for RNA: ENST00000531050.5

PTPRK-219, Transcript of protein tyrosine phosphatase, receptor type K, humanhuman

TSL 1 (best)

Gene PTPRK, Length 2,515 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRK-219ENST00000531050 C11orf53Q8IXP5 236 aa6.17□□□□□ -1.42
PTPRK-219ENST00000531050 FMC1Q96HJ9 113 aa6.17□□□□□ -1.42
PTPRK-219ENST00000531050 ENY2Q9NPA8 101 aa6.17□□□□□ -1.42
PTPRK-219ENST00000531050 TRAV8-1A0A0A6YYK1 113 aa6.17□□□□□ -1.42
PTPRK-219ENST00000531050 A0A1B0GX51 115 aa6.17□□□□□ -1.42
PTPRK-219ENST00000531050 PGPA6NDG6 321 aa6.17□□□□□ -1.42
PTPRK-219ENST00000531050 OOSP1A8MZH6 123 aa6.17□□□□□ -1.42
PTPRK-219ENST00000531050 NDUFA7O95182 113 aa6.17□□□□□ -1.42
PTPRK-219ENST00000531050 NPYP01303 97 aa6.17□□□□□ -1.42
PTPRK-219ENST00000531050 DEFB133Q30KQ1 61 aa6.17□□□□□ -1.42
PTPRK-219ENST00000531050 PATE2Q6UY27 113 aa6.17□□□□□ -1.42
PTPRK-219ENST00000531050 ORMDL3Q8N138 153 aa6.17□□□□□ -1.42
PTPRK-219ENST00000531050 SEC16AO15027 2179 aa6.16□□□□□ -1.42
PTPRK-219ENST00000531050 IGHV3-43A0A0B4J1X8 118 aa6.16□□□□□ -1.42
PTPRK-219ENST00000531050 F5H768 121 aa6.16□□□□□ -1.42
PTPRK-219ENST00000531050 SCGB1C2P0DMR2 95 aa6.16□□□□□ -1.42
PTPRK-219ENST00000531050 IGHV3-43DP0DP04 118 aa6.16□□□□□ -1.42
PTPRK-219ENST00000531050 ERVK-16P61578 105 aa6.16□□□□□ -1.42
PTPRK-219ENST00000531050 PDPNQ86YL7 162 aa6.16□□□□□ -1.42
PTPRK-219ENST00000531050 AMN1Q8IY45 258 aa6.16□□□□□ -1.42
PTPRK-219ENST00000531050 SRSF12Q8WXF0 261 aaKnown RBP6.16□□□□□ -1.42
PTPRK-219ENST00000531050 ZNF714Q96N38 554 aa6.16□□□□□ -1.42
PTPRK-219ENST00000531050 FOXB1Q99853 325 aa6.16□□□□□ -1.42
PTPRK-219ENST00000531050 FOXC2Q99958 501 aa6.16□□□□□ -1.42
PTPRK-219ENST00000531050 PRNDQ9UKY0 176 aa6.16□□□□□ -1.42
PTPRK-219ENST00000531050 KNTC1P50748 2209 aa6.16□□□□□ -1.42
PTPRK-219ENST00000531050 CABIN1Q9Y6J0 2220 aa6.16□□□□□ -1.42
PTPRK-219ENST00000531050 COL6A3P12111 3177 aa6.16□□□□□ -1.42
PTPRK-219ENST00000531050 SPTBN5Q9NRC6 3674 aaKnown RBP6.16□□□□□ -1.42
PTPRK-219ENST00000531050 TRAV40A0A0B4J280 105 aa6.16□□□□□ -1.42
PTPRK-219ENST00000531050 TMEM30CPA0ZSE6 113 aa6.16□□□□□ -1.42
PTPRK-219ENST00000531050 DEFB108AA8MXU0 73 aa6.16□□□□□ -1.42
PTPRK-219ENST00000531050 PRSS1P07477 247 aa6.16□□□□□ -1.42
PTPRK-219ENST00000531050 PCBD1P61457 104 aa6.16□□□□□ -1.42
PTPRK-219ENST00000531050 HSPE1P61604 102 aaKnown RBP6.16□□□□□ -1.42
PTPRK-219ENST00000531050 FAM104BQ5XKR9 115 aa6.16□□□□□ -1.42
PTPRK-219ENST00000531050 Q86TA4 180 aa6.16□□□□□ -1.42
PTPRK-219ENST00000531050 FAM57AQ8TBR7 257 aa6.16□□□□□ -1.42
PTPRK-219ENST00000531050 NPIPB3Q92617 1050 aa6.16□□□□□ -1.42
PTPRK-219ENST00000531050 TMEM14BQ9NUH8 114 aa6.16□□□□□ -1.42
PTPRK-219ENST00000531050 TMEM160Q9NX00 188 aa6.16□□□□□ -1.42
PTPRK-219ENST00000531050 BRWD1Q9NSI6 2320 aa6.15□□□□□ -1.42
PTPRK-219ENST00000531050 J3QT63 122 aa6.15□□□□□ -1.42
PTPRK-219ENST00000531050 COX7A2P2O60397 106 aa6.15□□□□□ -1.42
PTPRK-219ENST00000531050 PSPNO60542 156 aa6.15□□□□□ -1.42
PTPRK-219ENST00000531050 TCRAP04437 139 aa6.15□□□□□ -1.42
PTPRK-219ENST00000531050 FKBP2P26885 142 aaKnown RBP6.15□□□□□ -1.42
PTPRK-219ENST00000531050 HERVK_113P63121 156 aa6.15□□□□□ -1.42
PTPRK-219ENST00000531050 TWIST1Q15672 202 aa6.15□□□□□ -1.42
PTPRK-219ENST00000531050 MRPL51Q4U2R6 128 aaKnown RBP6.15□□□□□ -1.42
PTPRK-219ENST00000531050 LYRM7Q5U5X0 104 aa6.15□□□□□ -1.42
PTPRK-219ENST00000531050 OR11H6Q8NGC7 330 aa6.15□□□□□ -1.42
PTPRK-219ENST00000531050 PRADC1Q9BSG0 188 aa6.15□□□□□ -1.42
PTPRK-219ENST00000531050 SRXN1Q9BYN0 137 aa6.15□□□□□ -1.42
PTPRK-219ENST00000531050 EDA2RQ9HAV5 297 aa6.15□□□□□ -1.42
PTPRK-219ENST00000531050 OBP2BQ9NPH6 170 aa6.15□□□□□ -1.42
PTPRK-219ENST00000531050 FOXA2Q9Y261 457 aaPredicted RBP6.15□□□□□ -1.42
PTPRK-219ENST00000531050 KLK5Q9Y337 293 aaPredicted RBP6.15□□□□□ -1.42
PTPRK-219ENST00000531050 OOEPA6NGQ2 149 aa6.15□□□□□ -1.43
PTPRK-219ENST00000531050 LINC01546A6NGU7 62 aa6.15□□□□□ -1.43
PTPRK-219ENST00000531050 LMO7DNF2Z398 122 aa6.15□□□□□ -1.43
PTPRK-219ENST00000531050 SMKR1H3BMG3 65 aa6.15□□□□□ -1.43
PTPRK-219ENST00000531050 M0R2P5 195 aa6.15□□□□□ -1.43
PTPRK-219ENST00000531050 SLC25A20O43772 301 aa6.15□□□□□ -1.43
PTPRK-219ENST00000531050 SS18L1O75177 396 aaPredicted RBP6.15□□□□□ -1.43
PTPRK-219ENST00000531050 FOXC1Q12948 553 aa6.15□□□□□ -1.43
PTPRK-219ENST00000531050 C10orf113Q5VZT2 155 aa6.15□□□□□ -1.43
PTPRK-219ENST00000531050 Q8N1Y9 231 aa6.15□□□□□ -1.43
PTPRK-219ENST00000531050 NFAM1Q8NET5 270 aaPredicted RBP6.15□□□□□ -1.43
PTPRK-219ENST00000531050 OR13A1Q8NGR1 328 aa6.15□□□□□ -1.43
PTPRK-219ENST00000531050 OR13C6PQ8NH95 151 aa6.15□□□□□ -1.43
PTPRK-219ENST00000531050 MRPL35Q9NZE8 188 aaKnown RBP6.15□□□□□ -1.43
PTPRK-219ENST00000531050 PTPRBP23467 1997 aa6.14□□□□□ -1.43
PTPRK-219ENST00000531050 KNL1Q8NG31 2342 aa6.14□□□□□ -1.43
PTPRK-219ENST00000531050 FER1L5A0AVI2 2057 aa6.14□□□□□ -1.43
PTPRK-219ENST00000531050 PLAUP00749 431 aa6.14□□□□□ -1.43
PTPRK-219ENST00000531050 CD7P09564 240 aa6.14□□□□□ -1.43
PTPRK-219ENST00000531050 IGLC6P0CF74 106 aa6.14□□□□□ -1.43
PTPRK-219ENST00000531050 LEPP41159 167 aa6.14□□□□□ -1.43
PTPRK-219ENST00000531050 CFHR1Q03591 330 aa6.14□□□□□ -1.43
PTPRK-219ENST00000531050 IGHV1OR21-1A0A087WYE8 117 aa6.14□□□□□ -1.43
PTPRK-219ENST00000531050 DNPH1O43598 174 aa6.14□□□□□ -1.43
PTPRK-219ENST00000531050 IGLV2-11P01706 119 aa6.14□□□□□ -1.43
PTPRK-219ENST00000531050 LGALS1P09382 135 aaKnown RBP6.14□□□□□ -1.43
PTPRK-219ENST00000531050 CRIP2P52943 208 aaPredicted RBP6.14□□□□□ -1.43
PTPRK-219ENST00000531050 NXPH1P58417 271 aa6.14□□□□□ -1.43
PTPRK-219ENST00000531050 C6orf15Q6UXA7 325 aaPredicted RBP6.14□□□□□ -1.43
PTPRK-219ENST00000531050 WDR86Q86TI4 376 aa6.14□□□□□ -1.43
PTPRK-219ENST00000531050 FLYWCH2Q96CP2 140 aaKnown RBP6.14□□□□□ -1.43
PTPRK-219ENST00000531050 TNRC6BQ9UPQ9 1833 aaKnown RBP6.13□□□□□ -1.43
PTPRK-219ENST00000531050 TRAV2A0A0B4J234 112 aa6.13□□□□□ -1.43
PTPRK-219ENST00000531050 TRAV8-4A0A0B4J246 113 aa6.13□□□□□ -1.43
PTPRK-219ENST00000531050 A0A0J9YW62 118 aa6.13□□□□□ -1.43
PTPRK-219ENST00000531050 NCBP2LA6PVI3 153 aaKnown RBP6.13□□□□□ -1.43
PTPRK-219ENST00000531050 ATP5LO75964 103 aa6.13□□□□□ -1.43
PTPRK-219ENST00000531050 ZNF134P52741 427 aa6.13□□□□□ -1.43
PTPRK-219ENST00000531050 RPS28P62857 69 aaKnown RBP6.13□□□□□ -1.43
PTPRK-219ENST00000531050 ZNF672Q499Z4 452 aaPredicted RBP6.13□□□□□ -1.43
PTPRK-219ENST00000531050 RPL39P5Q59GN2 51 aa6.13□□□□□ -1.43
PTPRK-219ENST00000531050 C9orf153Q5TBE3 101 aa6.13□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 46.7 ms