RNA–Protein interactions for RNA: ENST00000527739.5

CAPN1-211, Transcript of calpain 1, humanhuman

TSL 4

Gene CAPN1, Length 582 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-211ENST00000527739 RRN3P1Q2M238 152 aa13.81□□□□□ -0.2
CAPN1-211ENST00000527739 IGF2BP2-AS1Q96M15 143 aa13.81□□□□□ -0.2
CAPN1-211ENST00000527739 MGST2Q99735 147 aa13.81□□□□□ -0.2
CAPN1-211ENST00000527739 RNF126Q9BV68 326 aa13.81□□□□□ -0.2
CAPN1-211ENST00000527739 CXCL3P19876 107 aa13.8□□□□□ -0.2
CAPN1-211ENST00000527739 CAMLGP49069 296 aa13.8□□□□□ -0.2
CAPN1-211ENST00000527739 PSG3Q16557 428 aa13.8□□□□□ -0.2
CAPN1-211ENST00000527739 FAM222AQ5U5X8 452 aa13.8□□□□□ -0.2
CAPN1-211ENST00000527739 C10orf113Q5VZT2 155 aa13.8□□□□□ -0.2
CAPN1-211ENST00000527739 AMTNQ6UX39 209 aa13.8□□□□□ -0.2
CAPN1-211ENST00000527739 OR11H7Q8NGC8 314 aa13.8□□□□□ -0.2
CAPN1-211ENST00000527739 PLA2G2EQ9NZK7 142 aa13.8□□□□□ -0.2
CAPN1-211ENST00000527739 A0A087X0K7 114 aa13.79□□□□□ -0.2
CAPN1-211ENST00000527739 INSP01308 110 aa13.79□□□□□ -0.2
CAPN1-211ENST00000527739 AMBPP02760 352 aa13.79□□□□□ -0.2
CAPN1-211ENST00000527739 HTN3P15516 51 aa13.79□□□□□ -0.2
CAPN1-211ENST00000527739 ASAH1Q13510 395 aa13.79□□□□□ -0.2
CAPN1-211ENST00000527739 RAB32Q13637 225 aa13.79□□□□□ -0.2
CAPN1-211ENST00000527739 Q6ZRG5 221 aa13.79□□□□□ -0.2
CAPN1-211ENST00000527739 LINC00299Q6ZSB3 139 aa13.79□□□□□ -0.2
CAPN1-211ENST00000527739 NRARPQ7Z6K4 114 aa13.79□□□□□ -0.2
CAPN1-211ENST00000527739 ENKURQ8TC29 256 aa13.79□□□□□ -0.2
CAPN1-211ENST00000527739 UQCC1Q9NVA1 299 aa13.79□□□□□ -0.2
CAPN1-211ENST00000527739 HECTD4Q9Y4D8 3996 aa13.79□□□□□ -0.2
CAPN1-211ENST00000527739 A8MTW9 85 aa13.78□□□□□ -0.2
CAPN1-211ENST00000527739 H3BTX0 84 aa13.78□□□□□ -0.2
CAPN1-211ENST00000527739 MIC13Q5XKP0 118 aa13.78□□□□□ -0.2
CAPN1-211ENST00000527739 BPIFA4PQ86YQ2 179 aa13.78□□□□□ -0.2
CAPN1-211ENST00000527739 OR8A1Q8NGG7 326 aa13.78□□□□□ -0.2
CAPN1-211ENST00000527739 NIPSNAP3BQ9BS92 247 aa13.78□□□□□ -0.2
CAPN1-211ENST00000527739 NDUFAF3Q9BU61 184 aa13.78□□□□□ -0.2
CAPN1-211ENST00000527739 DKK2Q9UBU2 259 aa13.78□□□□□ -0.2
CAPN1-211ENST00000527739 YTHDF2Q9Y5A9 579 aaKnown RBP13.78□□□□□ -0.2
CAPN1-211ENST00000527739 TRAV12-2A0A075B6T6 113 aa13.77□□□□□ -0.21
CAPN1-211ENST00000527739 TEX48A0A1B0GUV7 120 aa13.77□□□□□ -0.21
CAPN1-211ENST00000527739 ZNF705GA8MUZ8 300 aaPredicted RBP13.77□□□□□ -0.21
CAPN1-211ENST00000527739 SULT1A1P50225 295 aa13.77□□□□□ -0.21
CAPN1-211ENST00000527739 BAXQ07812 192 aa13.77□□□□□ -0.21
CAPN1-211ENST00000527739 STX12Q86Y82 276 aa13.77□□□□□ -0.21
CAPN1-211ENST00000527739 BAP18Q8IXM2 172 aa13.77□□□□□ -0.21
CAPN1-211ENST00000527739 TMEM37Q8WXS4 190 aa13.77□□□□□ -0.21
CAPN1-211ENST00000527739 RPUSD4Q96CM3 377 aaKnown RBP13.77□□□□□ -0.21
CAPN1-211ENST00000527739 GPN1Q9HCN4 374 aaPredicted RBP13.77□□□□□ -0.21
CAPN1-211ENST00000527739 DNAJC4Q9NNZ3 241 aa13.77□□□□□ -0.21
CAPN1-211ENST00000527739 UBE2L5PA0A1B0GUS4 154 aa13.76□□□□□ -0.21
CAPN1-211ENST00000527739 IGSF23A1L1A6 192 aa13.76□□□□□ -0.21
CAPN1-211ENST00000527739 BOLA2-SMG1P6H3BVE0 249 aa13.76□□□□□ -0.21
CAPN1-211ENST00000527739 MRPS12O15235 138 aaKnown RBP13.76□□□□□ -0.21
CAPN1-211ENST00000527739 PRM2P04554 102 aa13.76□□□□□ -0.21
CAPN1-211ENST00000527739 S100A11P31949 105 aa13.76□□□□□ -0.21
CAPN1-211ENST00000527739 HBG1P69891 147 aa13.76□□□□□ -0.21
CAPN1-211ENST00000527739 HBG2P69892 147 aa13.76□□□□□ -0.21
CAPN1-211ENST00000527739 OPCMLQ14982 345 aa13.76□□□□□ -0.21
CAPN1-211ENST00000527739 LCN15Q6UWW0 184 aa13.76□□□□□ -0.21
CAPN1-211ENST00000527739 TMEM252Q8N6L7 170 aa13.76□□□□□ -0.21
CAPN1-211ENST00000527739 C11orf1Q9H5F2 150 aa13.76□□□□□ -0.21
CAPN1-211ENST00000527739 LYRM2Q9NU23 88 aaPredicted RBP13.76□□□□□ -0.21
CAPN1-211ENST00000527739 CRXO43186 299 aaPredicted RBP13.75□□□□□ -0.21
CAPN1-211ENST00000527739 UPK1BO75841 260 aa13.75□□□□□ -0.21
CAPN1-211ENST00000527739 SIX6O95475 246 aa13.75□□□□□ -0.21
CAPN1-211ENST00000527739 HTN1P15515 57 aa13.75□□□□□ -0.21
CAPN1-211ENST00000527739 DAD1P61803 113 aa13.75□□□□□ -0.21
CAPN1-211ENST00000527739 MORN5Q5VZ52 161 aa13.75□□□□□ -0.21
CAPN1-211ENST00000527739 OR1L4Q8NGR5 311 aa13.75□□□□□ -0.21
CAPN1-211ENST00000527739 LINC01587Q99440 93 aa13.75□□□□□ -0.21
CAPN1-211ENST00000527739 WDR83OSQ9Y284 106 aa13.75□□□□□ -0.21
CAPN1-211ENST00000527739 KIAA1109Q2LD37 5005 aa13.75□□□□□ -0.21
CAPN1-211ENST00000527739 TRAV5A0A0B4J249 113 aa13.74□□□□□ -0.21
CAPN1-211ENST00000527739 RLN2P04090 185 aa13.74□□□□□ -0.21
CAPN1-211ENST00000527739 CXCL2P19875 107 aa13.74□□□□□ -0.21
CAPN1-211ENST00000527739 IL15RAQ13261 267 aa13.74□□□□□ -0.21
CAPN1-211ENST00000527739 SLC50A1Q9BRV3 221 aa13.74□□□□□ -0.21
CAPN1-211ENST00000527739 ZNF331Q9NQX6 463 aaPredicted RBP13.74□□□□□ -0.21
CAPN1-211ENST00000527739 DNAH6Q9C0G6 4158 aa13.74□□□□□ -0.21
CAPN1-211ENST00000527739 A6NHS1 94 aa13.73□□□□□ -0.21
CAPN1-211ENST00000527739 FGF7P21781 194 aa13.73□□□□□ -0.21
CAPN1-211ENST00000527739 B2MP61769 119 aa13.73□□□□□ -0.21
CAPN1-211ENST00000527739 PCLOQ9Y6V0 5065 aa13.73□□□□□ -0.21
CAPN1-211ENST00000527739 P0DMU3 169 aa13.72□□□□□ -0.21
CAPN1-211ENST00000527739 FAM231AP0DMU4 169 aa13.72□□□□□ -0.21
CAPN1-211ENST00000527739 FAM231CP0DMU5 169 aa13.72□□□□□ -0.21
CAPN1-211ENST00000527739 ATP6V1FQ16864 119 aa13.72□□□□□ -0.21
CAPN1-211ENST00000527739 VWC2Q2TAL6 325 aa13.72□□□□□ -0.21
CAPN1-211ENST00000527739 OR10J6PQ8NGY7 276 aa13.72□□□□□ -0.21
CAPN1-211ENST00000527739 PFDN5Q99471 154 aa13.72□□□□□ -0.21
CAPN1-211ENST00000527739 SLC39A9Q9NUM3 307 aa13.72□□□□□ -0.21
CAPN1-211ENST00000527739 INMT-MINDY4F8WBC2 141 aa13.71□□□□□ -0.21
CAPN1-211ENST00000527739 H3BQ15 152 aa13.71□□□□□ -0.21
CAPN1-211ENST00000527739 SLC17A3O00476 420 aa13.71□□□□□ -0.21
CAPN1-211ENST00000527739 DEFB130BP0DP73 79 aa13.71□□□□□ -0.21
CAPN1-211ENST00000527739 DEFB130AP0DP74 79 aa13.71□□□□□ -0.21
CAPN1-211ENST00000527739 RPL29P47914 159 aaKnown RBP13.71□□□□□ -0.21
CAPN1-211ENST00000527739 LRRC37A5PQ49AS3 106 aa13.71□□□□□ -0.21
CAPN1-211ENST00000527739 PTTG2Q9NZH5 202 aa13.71□□□□□ -0.21
CAPN1-211ENST00000527739 PXMP4Q9Y6I8 212 aa13.71□□□□□ -0.21
CAPN1-211ENST00000527739 PRAC2D3DTV9 90 aa13.7□□□□□ -0.22
CAPN1-211ENST00000527739 AZU1P20160 251 aa13.7□□□□□ -0.22
CAPN1-211ENST00000527739 CDKN1BP46527 198 aa13.7□□□□□ -0.22
CAPN1-211ENST00000527739 IFITM3Q01628 133 aa13.7□□□□□ -0.22
CAPN1-211ENST00000527739 NHLH2Q02577 135 aa13.7□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 68.4 ms