RNA–Protein interactions for RNA: ENST00000527733.5

USP47-207, Transcript of ubiquitin specific peptidase 47, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene USP47, Length 4,525 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP47-207ENST00000527733 CDX1P47902 265 aaPredicted RBP11.96□□□□□ -0.5
USP47-207ENST00000527733 C1orf194Q5T5A4 169 aa11.96□□□□□ -0.5
USP47-207ENST00000527733 IGFL4Q6B9Z1 124 aa11.96□□□□□ -0.5
USP47-207ENST00000527733 IGFBPL1Q8WX77 278 aa11.96□□□□□ -0.5
USP47-207ENST00000527733 H3BUA1 57 aa11.96□□□□□ -0.5
USP47-207ENST00000527733 NDUFA4O00483 81 aa11.96□□□□□ -0.5
USP47-207ENST00000527733 FCN3O75636 299 aa11.96□□□□□ -0.5
USP47-207ENST00000527733 CA1P00915 261 aaPredicted RBP11.96□□□□□ -0.5
USP47-207ENST00000527733 OR1N2Q8NGR9 330 aa11.96□□□□□ -0.5
USP47-207ENST00000527733 FSTL3O95633 263 aa11.95□□□□□ -0.5
USP47-207ENST00000527733 LMO4P61968 165 aa11.95□□□□□ -0.5
USP47-207ENST00000527733 PSG3Q16557 428 aa11.95□□□□□ -0.5
USP47-207ENST00000527733 ORMDL3Q8N138 153 aa11.95□□□□□ -0.5
USP47-207ENST00000527733 WFDC12Q8WWY7 111 aa11.95□□□□□ -0.5
USP47-207ENST00000527733 UBE2L6O14933 153 aa11.95□□□□□ -0.5
USP47-207ENST00000527733 ODF3L1Q8IXM7 274 aa11.95□□□□□ -0.5
USP47-207ENST00000527733 SIRPDQ9H106 197 aa11.95□□□□□ -0.5
USP47-207ENST00000527733 F2Z2F3 143 aa11.94□□□□□ -0.5
USP47-207ENST00000527733 LINC01619G3V211 115 aa11.94□□□□□ -0.5
USP47-207ENST00000527733 RNF224P0DH78 156 aa11.94□□□□□ -0.5
USP47-207ENST00000527733 PPIFP30405 207 aaKnown RBP11.94□□□□□ -0.5
USP47-207ENST00000527733 Q8TAT8 98 aa11.94□□□□□ -0.5
USP47-207ENST00000527733 TNFRSF18Q9Y5U5 241 aa11.94□□□□□ -0.5
USP47-207ENST00000527733 HIVEP3Q5T1R4 2406 aa11.94□□□□□ -0.5
USP47-207ENST00000527733 IGHV7-81A0A0B4J1V7 117 aa11.94□□□□□ -0.5
USP47-207ENST00000527733 LINC00574Q9H8X3 128 aa11.94□□□□□ -0.5
USP47-207ENST00000527733 TRGV11A0A075B6L2 103 aa11.94□□□□□ -0.5
USP47-207ENST00000527733 C5orf30Q96GV9 206 aa11.94□□□□□ -0.5
USP47-207ENST00000527733 TRGV2A0A075B6R0 118 aa11.94□□□□□ -0.5
USP47-207ENST00000527733 IGLV2-14P01704 120 aa11.94□□□□□ -0.5
USP47-207ENST00000527733 FAM90A2PQ658T7 463 aa11.94□□□□□ -0.5
USP47-207ENST00000527733 SCGB1D4Q6XE38 83 aa11.94□□□□□ -0.5
USP47-207ENST00000527733 C1QL4Q86Z23 238 aa11.94□□□□□ -0.5
USP47-207ENST00000527733 KLK15Q9H2R5 256 aa11.94□□□□□ -0.5
USP47-207ENST00000527733 PAM16Q9Y3D7 125 aa11.94□□□□□ -0.5
USP47-207ENST00000527733 PRR20EP86478 221 aa11.93□□□□□ -0.5
USP47-207ENST00000527733 PRR20CP86479 221 aa11.93□□□□□ -0.5
USP47-207ENST00000527733 PRR20DP86480 221 aa11.93□□□□□ -0.5
USP47-207ENST00000527733 PRR20BP86481 221 aa11.93□□□□□ -0.5
USP47-207ENST00000527733 PRR20AP86496 221 aa11.93□□□□□ -0.5
USP47-207ENST00000527733 TRBV24-1A0A075B6N3 115 aa11.93□□□□□ -0.5
USP47-207ENST00000527733 C3orf56Q8N813 242 aa11.93□□□□□ -0.5
USP47-207ENST00000527733 RITA1Q96K30 269 aa11.93□□□□□ -0.5
USP47-207ENST00000527733 OR11H12B2RN74 326 aa11.93□□□□□ -0.5
USP47-207ENST00000527733 EMP1P54849 157 aa11.93□□□□□ -0.5
USP47-207ENST00000527733 ZNF726P1Q15940 193 aa11.93□□□□□ -0.5
USP47-207ENST00000527733 ARHGAP21Q5T5U3 1957 aa11.93□□□□□ -0.5
USP47-207ENST00000527733 TRBV19A0A075B6N1 114 aa11.92□□□□□ -0.5
USP47-207ENST00000527733 CACNG7P62955 275 aa11.92□□□□□ -0.5
USP47-207ENST00000527733 TMEM183AQ8IXX5 376 aa11.92□□□□□ -0.5
USP47-207ENST00000527733 FOLR2P14207 255 aa11.92□□□□□ -0.5
USP47-207ENST00000527733 FOXL1Q12952 345 aa11.92□□□□□ -0.5
USP47-207ENST00000527733 TCF23Q7RTU1 214 aa11.92□□□□□ -0.5
USP47-207ENST00000527733 ACTL10Q5JWF8 245 aa11.92□□□□□ -0.5
USP47-207ENST00000527733 PAPPA-AS1Q5QFB9 102 aa11.92□□□□□ -0.5
USP47-207ENST00000527733 Q6ZPA2 131 aa11.92□□□□□ -0.5
USP47-207ENST00000527733 Q8N9W7 124 aa11.92□□□□□ -0.5
USP47-207ENST00000527733 LINC00479Q96M42 142 aa11.92□□□□□ -0.5
USP47-207ENST00000527733 MYO9AB2RTY4 2548 aa11.92□□□□□ -0.5
USP47-207ENST00000527733 PRUNE2Q8WUY3 3088 aa11.91□□□□□ -0.5
USP47-207ENST00000527733 TCF21O43680 179 aa11.91□□□□□ -0.5
USP47-207ENST00000527733 PMCHL1Q16048 86 aa11.91□□□□□ -0.5
USP47-207ENST00000527733 ATP5L2Q7Z4Y8 100 aa11.91□□□□□ -0.5
USP47-207ENST00000527733 OR11H1Q8NG94 326 aa11.91□□□□□ -0.5
USP47-207ENST00000527733 SSBP4Q9BWG4 385 aaPredicted RBP11.91□□□□□ -0.5
USP47-207ENST00000527733 H3BRN7 92 aa11.91□□□□□ -0.5
USP47-207ENST00000527733 APOHP02749 345 aaPredicted RBP11.91□□□□□ -0.5
USP47-207ENST00000527733 LY6G5BQ8NDX9 201 aa11.91□□□□□ -0.5
USP47-207ENST00000527733 ZFYVE26Q68DK2 2539 aa11.91□□□□□ -0.5
USP47-207ENST00000527733 BLCAPP62952 87 aa11.91□□□□□ -0.5
USP47-207ENST00000527733 VWC2Q2TAL6 325 aa11.91□□□□□ -0.5
USP47-207ENST00000527733 ZNF491Q8N8L2 437 aa11.91□□□□□ -0.5
USP47-207ENST00000527733 SLC25A2Q9BXI2 301 aa11.91□□□□□ -0.5
USP47-207ENST00000527733 IFITM10A6NMD0 228 aa11.9□□□□□ -0.5
USP47-207ENST00000527733 H3BVH4 76 aa11.9□□□□□ -0.5
USP47-207ENST00000527733 LOXL1Q08397 574 aaPredicted RBP11.9□□□□□ -0.5
USP47-207ENST00000527733 C11orf71Q6IPW1 123 aa11.9□□□□□ -0.5
USP47-207ENST00000527733 ST6GALNAC6Q969X2 333 aa11.9□□□□□ -0.5
USP47-207ENST00000527733 TMEM14CQ9P0S9 112 aa11.9□□□□□ -0.5
USP47-207ENST00000527733 ZMAT5Q9UDW3 170 aaKnown RBP11.9□□□□□ -0.5
USP47-207ENST00000527733 GZMBP10144 247 aa11.9□□□□□ -0.5
USP47-207ENST00000527733 Q86TA4 180 aa11.9□□□□□ -0.5
USP47-207ENST00000527733 ZNF114Q8NC26 417 aa11.9□□□□□ -0.5
USP47-207ENST00000527733 TMEM170AQ8WVE7 144 aa11.9□□□□□ -0.5
USP47-207ENST00000527733 GNB1LQ9BYB4 327 aa11.9□□□□□ -0.5
USP47-207ENST00000527733 PPBPP02775 128 aa11.9□□□□□ -0.5
USP47-207ENST00000527733 LSM4Q9Y4Z0 139 aaKnown RBP11.9□□□□□ -0.5
USP47-207ENST00000527733 C9JQL5 133 aa11.9□□□□□ -0.51
USP47-207ENST00000527733 TNCP24821 2201 aa11.89□□□□□ -0.51
USP47-207ENST00000527733 DEFB131AP59861 70 aa11.89□□□□□ -0.51
USP47-207ENST00000527733 LRRC75A-AS1Q8N1F1 130 aa11.89□□□□□ -0.51
USP47-207ENST00000527733 ZNF502Q8TBZ5 544 aa11.89□□□□□ -0.51
USP47-207ENST00000527733 ABCA2Q9BZC7 2435 aa11.89□□□□□ -0.51
USP47-207ENST00000527733 TCTEX1D4Q5JR98 221 aa11.89□□□□□ -0.51
USP47-207ENST00000527733 A0A0C4DFX4 3053 aa11.89□□□□□ -0.51
USP47-207ENST00000527733 SH2D1AO60880 128 aa11.89□□□□□ -0.51
USP47-207ENST00000527733 PROP1O75360 226 aa11.89□□□□□ -0.51
USP47-207ENST00000527733 Q1RN00 199 aa11.89□□□□□ -0.51
USP47-207ENST00000527733 M0R143 59 aa11.88□□□□□ -0.51
USP47-207ENST00000527733 IGLV2-23P01705 113 aa11.88□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 161.5 ms