RNA–Protein interactions for RNA: ENST00000527154.5

CHMP4A-203, Transcript of charged multivesicular body protein 4A, humanhuman

TSL 2

Gene CHMP4A, Length 571 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4A-203ENST00000527154 SULT1A3P0DMM9 295 aa10.92□□□□□ -0.66
CHMP4A-203ENST00000527154 SULT1A4P0DMN0 295 aa10.92□□□□□ -0.66
CHMP4A-203ENST00000527154 PSG3Q16557 428 aa10.92□□□□□ -0.66
CHMP4A-203ENST00000527154 IL22RA2Q969J5 263 aa10.92□□□□□ -0.66
CHMP4A-203ENST00000527154 MSRB1Q9NZV6 116 aa10.92□□□□□ -0.66
CHMP4A-203ENST00000527154 IGLV5-52A0A0A0MRZ9 124 aa10.91□□□□□ -0.66
CHMP4A-203ENST00000527154 PRSS46E5RG02 174 aa10.91□□□□□ -0.66
CHMP4A-203ENST00000527154 H3BRN7 92 aa10.91□□□□□ -0.66
CHMP4A-203ENST00000527154 RHOBP62745 196 aa10.91□□□□□ -0.66
CHMP4A-203ENST00000527154 GPR107Q5VW38 600 aa10.91□□□□□ -0.66
CHMP4A-203ENST00000527154 TMEM182Q6ZP80 229 aaPredicted RBP10.91□□□□□ -0.66
CHMP4A-203ENST00000527154 Q6ZTI0 123 aa10.91□□□□□ -0.66
CHMP4A-203ENST00000527154 RBKSQ9H477 322 aa10.91□□□□□ -0.66
CHMP4A-203ENST00000527154 TRAV9-2A0A087WT02 112 aa10.9□□□□□ -0.66
CHMP4A-203ENST00000527154 CRYM-AS1A6NIL9 109 aa10.9□□□□□ -0.66
CHMP4A-203ENST00000527154 DISC1C4P0D8 188 aa10.9□□□□□ -0.66
CHMP4A-203ENST00000527154 ZNF324O75467 553 aaPredicted RBP10.9□□□□□ -0.66
CHMP4A-203ENST00000527154 SURF2Q15527 256 aaPredicted RBP10.9□□□□□ -0.66
CHMP4A-203ENST00000527154 GFI1BQ5VTD9 330 aa10.9□□□□□ -0.66
CHMP4A-203ENST00000527154 LYPD5Q6UWN5 251 aa10.9□□□□□ -0.66
CHMP4A-203ENST00000527154 LINC00528Q8N1L1 170 aa10.9□□□□□ -0.66
CHMP4A-203ENST00000527154 BCL7BQ9BQE9 202 aa10.9□□□□□ -0.66
CHMP4A-203ENST00000527154 LY96Q9Y6Y9 160 aa10.9□□□□□ -0.66
CHMP4A-203ENST00000527154 LRP2P98164 4655 aa10.9□□□□□ -0.66
CHMP4A-203ENST00000527154 SNURFLB1AK76 121 aa10.89□□□□□ -0.67
CHMP4A-203ENST00000527154 CCR6P51684 374 aa10.89□□□□□ -0.67
CHMP4A-203ENST00000527154 SSBP1Q04837 148 aaKnown RBP10.89□□□□□ -0.67
CHMP4A-203ENST00000527154 CCDC28AQ8IWP9 274 aa10.89□□□□□ -0.67
CHMP4A-203ENST00000527154 C11orf72Q8NBR9 251 aa10.89□□□□□ -0.67
CHMP4A-203ENST00000527154 SHANK2-AS3Q9BTD1 123 aa10.89□□□□□ -0.67
CHMP4A-203ENST00000527154 NAA50Q9GZZ1 169 aaKnown RBP10.89□□□□□ -0.67
CHMP4A-203ENST00000527154 GPR132Q9UNW8 380 aa10.89□□□□□ -0.67
CHMP4A-203ENST00000527154 ICOSQ9Y6W8 199 aa10.89□□□□□ -0.67
CHMP4A-203ENST00000527154 NPIPB6E9PJ23 425 aa10.88□□□□□ -0.67
CHMP4A-203ENST00000527154 MRPS12O15235 138 aaKnown RBP10.88□□□□□ -0.67
CHMP4A-203ENST00000527154 RPL7P18124 248 aaKnown RBP10.88□□□□□ -0.67
CHMP4A-203ENST00000527154 CTF1Q16619 201 aa10.88□□□□□ -0.67
CHMP4A-203ENST00000527154 C4orf46Q504U0 113 aa10.88□□□□□ -0.67
CHMP4A-203ENST00000527154 RPUSD4Q96CM3 377 aaKnown RBP10.88□□□□□ -0.67
CHMP4A-203ENST00000527154 PRR13Q9NZ81 148 aa10.88□□□□□ -0.67
CHMP4A-203ENST00000527154 RGS5O15539 181 aa10.87□□□□□ -0.67
CHMP4A-203ENST00000527154 AKAIN1P0CW23 69 aa10.87□□□□□ -0.67
CHMP4A-203ENST00000527154 GATA2P23769 480 aaPredicted RBP10.87□□□□□ -0.67
CHMP4A-203ENST00000527154 S100A7P31151 101 aa10.87□□□□□ -0.67
CHMP4A-203ENST00000527154 PLP1P60201 277 aa10.87□□□□□ -0.67
CHMP4A-203ENST00000527154 MRPS10P82664 201 aaKnown RBP10.87□□□□□ -0.67
CHMP4A-203ENST00000527154 SMCO1Q147U7 214 aa10.87□□□□□ -0.67
CHMP4A-203ENST00000527154 BPIFCQ8NFQ6 507 aa10.87□□□□□ -0.67
CHMP4A-203ENST00000527154 OR1S1Q8NH92 325 aa10.87□□□□□ -0.67
CHMP4A-203ENST00000527154 TMEM147Q9BVK8 224 aa10.87□□□□□ -0.67
CHMP4A-203ENST00000527154 PPP1R14DQ9NXH3 145 aa10.87□□□□□ -0.67
CHMP4A-203ENST00000527154 KCNIP3Q9Y2W7 256 aa10.87□□□□□ -0.67
CHMP4A-203ENST00000527154 TNXBP22105 4242 aa10.86□□□□□ -0.67
CHMP4A-203ENST00000527154 A0A0B4J2A0 478 aa10.86□□□□□ -0.67
CHMP4A-203ENST00000527154 PITX3O75364 302 aa10.86□□□□□ -0.67
CHMP4A-203ENST00000527154 ORM2P19652 201 aa10.86□□□□□ -0.67
CHMP4A-203ENST00000527154 ACOT7LQ6ZUV0 252 aa10.86□□□□□ -0.67
CHMP4A-203ENST00000527154 Q8N814 137 aa10.86□□□□□ -0.67
CHMP4A-203ENST00000527154 PRRT1Q99946 306 aa10.86□□□□□ -0.67
CHMP4A-203ENST00000527154 PYGO2Q9BRQ0 406 aa10.86□□□□□ -0.67
CHMP4A-203ENST00000527154 MIXL1Q9H2W2 232 aa10.86□□□□□ -0.67
CHMP4A-203ENST00000527154 SHPKQ9UHJ6 478 aa10.86□□□□□ -0.67
CHMP4A-203ENST00000527154 NOL3O60936 208 aaKnown RBP10.85□□□□□ -0.67
CHMP4A-203ENST00000527154 CXCL2P19875 107 aa10.85□□□□□ -0.67
CHMP4A-203ENST00000527154 FGL1Q08830 312 aa10.85□□□□□ -0.67
CHMP4A-203ENST00000527154 WFDC10BQ8IUB3 73 aa10.85□□□□□ -0.67
CHMP4A-203ENST00000527154 OR51S1Q8NGJ8 323 aa10.85□□□□□ -0.67
CHMP4A-203ENST00000527154 RAB2BQ8WUD1 216 aa10.85□□□□□ -0.67
CHMP4A-203ENST00000527154 SMIM4Q8WVI0 70 aa10.85□□□□□ -0.67
CHMP4A-203ENST00000527154 ODF3Q96PU9 254 aa10.85□□□□□ -0.67
CHMP4A-203ENST00000527154 PARD6GQ9BYG4 376 aaPredicted RBP10.85□□□□□ -0.67
CHMP4A-203ENST00000527154 PAX4O43316 350 aa10.84□□□□□ -0.67
CHMP4A-203ENST00000527154 SPINK4O60575 86 aa10.84□□□□□ -0.67
CHMP4A-203ENST00000527154 CRYBA4P53673 196 aa10.84□□□□□ -0.67
CHMP4A-203ENST00000527154 TMBIM6P55061 237 aa10.84□□□□□ -0.67
CHMP4A-203ENST00000527154 LYZL2Q7Z4W2 148 aa10.84□□□□□ -0.67
CHMP4A-203ENST00000527154 CLVS1Q8IUQ0 354 aaPredicted RBP10.84□□□□□ -0.67
CHMP4A-203ENST00000527154 ZBTB8BQ8NAP8 495 aaPredicted RBP10.84□□□□□ -0.67
CHMP4A-203ENST00000527154 ZNF431Q8TF32 576 aaPredicted RBP10.84□□□□□ -0.67
CHMP4A-203ENST00000527154 ST6GAL2Q96JF0 529 aa10.84□□□□□ -0.67
CHMP4A-203ENST00000527154 ZNF331Q9NQX6 463 aaPredicted RBP10.84□□□□□ -0.67
CHMP4A-203ENST00000527154 PRO0255Q9UI72 69 aa10.84□□□□□ -0.67
CHMP4A-203ENST00000527154 TRGV2A0A075B6R0 118 aa10.83□□□□□ -0.68
CHMP4A-203ENST00000527154 CTDSP2O14595 271 aa10.83□□□□□ -0.68
CHMP4A-203ENST00000527154 EVI2AP22794 236 aa10.83□□□□□ -0.68
CHMP4A-203ENST00000527154 RAB11AP62491 216 aa10.83□□□□□ -0.68
CHMP4A-203ENST00000527154 IL18Q14116 193 aa10.83□□□□□ -0.68
CHMP4A-203ENST00000527154 MRPL23Q16540 153 aaKnown RBP10.83□□□□□ -0.68
CHMP4A-203ENST00000527154 NEGR1Q7Z3B1 354 aa10.83□□□□□ -0.68
CHMP4A-203ENST00000527154 C10orf126Q8N4M7 172 aa10.83□□□□□ -0.68
CHMP4A-203ENST00000527154 FUT9Q9Y231 359 aa10.83□□□□□ -0.68
CHMP4A-203ENST00000527154 PRB4P10163 310 aaPredicted RBP10.82□□□□□ -0.68
CHMP4A-203ENST00000527154 AKR1C4P17516 323 aa10.82□□□□□ -0.68
CHMP4A-203ENST00000527154 SLAQ13239 276 aa10.82□□□□□ -0.68
CHMP4A-203ENST00000527154 ANXA2RQ3ZCQ2 193 aa10.82□□□□□ -0.68
CHMP4A-203ENST00000527154 TEPPQ6URK8 271 aa10.82□□□□□ -0.68
CHMP4A-203ENST00000527154 ZNF680Q8NEM1 530 aa10.82□□□□□ -0.68
CHMP4A-203ENST00000527154 SCGB3A2Q96PL1 93 aa10.82□□□□□ -0.68
CHMP4A-203ENST00000527154 GSN-AS1Q9NRJ2 163 aa10.82□□□□□ -0.68
CHMP4A-203ENST00000527154 SCP2D1Q9UJQ7 156 aa10.82□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 58.6 ms