RNA–Protein interactions for RNA: ENST00000526669.6

CD44-224, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 5 BASIC

Gene CD44, Length 870 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-224ENST00000526669 UBE2L3P68036 154 aaKnown RBP10.25□□□□□ -0.77
CD44-224ENST00000526669 EIF5AL1Q6IS14 154 aaKnown RBP10.25□□□□□ -0.77
CD44-224ENST00000526669 IQCF2Q8IXL9 164 aa10.25□□□□□ -0.77
CD44-224ENST00000526669 LRRC20Q8TCA0 184 aa10.25□□□□□ -0.77
CD44-224ENST00000526669 DCANP1Q8TF63 244 aa10.25□□□□□ -0.77
CD44-224ENST00000526669 C16orf92Q96LL3 132 aa10.25□□□□□ -0.77
CD44-224ENST00000526669 A0A087X0K7 114 aa10.24□□□□□ -0.77
CD44-224ENST00000526669 MAP1LC3B2A6NCE7 125 aa10.24□□□□□ -0.77
CD44-224ENST00000526669 UMAD1C9J7I0 102 aa10.24□□□□□ -0.77
CD44-224ENST00000526669 STAG3L2P0CL84 134 aa10.24□□□□□ -0.77
CD44-224ENST00000526669 STAG3L3P0CL85 134 aa10.24□□□□□ -0.77
CD44-224ENST00000526669 IGLC2P0DOY2 106 aa10.24□□□□□ -0.77
CD44-224ENST00000526669 SULT1A2P50226 295 aa10.24□□□□□ -0.77
CD44-224ENST00000526669 ZNF124Q15973 351 aa10.24□□□□□ -0.77
CD44-224ENST00000526669 RNF141Q8WVD5 230 aa10.24□□□□□ -0.77
CD44-224ENST00000526669 FXYD5Q96DB9 178 aa10.24□□□□□ -0.77
CD44-224ENST00000526669 MAP1LC3BQ9GZQ8 125 aa10.24□□□□□ -0.77
CD44-224ENST00000526669 TMEM14CQ9P0S9 112 aa10.24□□□□□ -0.77
CD44-224ENST00000526669 SOCS3O14543 225 aa10.23□□□□□ -0.77
CD44-224ENST00000526669 HIST1H1EP10412 219 aaKnown RBP10.23□□□□□ -0.77
CD44-224ENST00000526669 MEOX2P50222 304 aa10.23□□□□□ -0.77
CD44-224ENST00000526669 DEFB131AP59861 70 aa10.23□□□□□ -0.77
CD44-224ENST00000526669 DEFB1P60022 68 aa10.23□□□□□ -0.77
CD44-224ENST00000526669 ODF3L2Q3SX64 289 aa10.23□□□□□ -0.77
CD44-224ENST00000526669 KPRPQ5T749 579 aaPredicted RBP10.23□□□□□ -0.77
CD44-224ENST00000526669 GTSCR1Q86UQ5 136 aa10.23□□□□□ -0.77
CD44-224ENST00000526669 RNF182Q8N6D2 247 aa10.23□□□□□ -0.77
CD44-224ENST00000526669 PHYHIPLQ96FC7 376 aa10.23□□□□□ -0.77
CD44-224ENST00000526669 C20orf173Q96LM9 149 aa10.23□□□□□ -0.77
CD44-224ENST00000526669 LINC00052Q96N35 136 aa10.23□□□□□ -0.77
CD44-224ENST00000526669 TMPRSS5Q9H3S3 457 aa10.23□□□□□ -0.77
CD44-224ENST00000526669 MAP6D1Q9H9H5 199 aa10.23□□□□□ -0.77
CD44-224ENST00000526669 AURKAIP1Q9NWT8 199 aaPredicted RBP10.23□□□□□ -0.77
CD44-224ENST00000526669 TRAV2A0A0B4J234 112 aa10.22□□□□□ -0.77
CD44-224ENST00000526669 TRAV8-2A0A0B4J237 113 aa10.22□□□□□ -0.77
CD44-224ENST00000526669 NBEAP1P0C6P0 100 aa10.22□□□□□ -0.77
CD44-224ENST00000526669 GCHFRP30047 84 aa10.22□□□□□ -0.77
CD44-224ENST00000526669 PSMG4Q5JS54 123 aa10.22□□□□□ -0.77
CD44-224ENST00000526669 PQLC2Q6ZP29 291 aa10.22□□□□□ -0.77
CD44-224ENST00000526669 APRG1Q8IVJ8 170 aa10.22□□□□□ -0.77
CD44-224ENST00000526669 HRH4Q9H3N8 390 aa10.22□□□□□ -0.77
CD44-224ENST00000526669 ZMAT5Q9UDW3 170 aaKnown RBP10.22□□□□□ -0.77
CD44-224ENST00000526669 TRBV19A0A075B6N1 114 aa10.21□□□□□ -0.77
CD44-224ENST00000526669 OR11H12B2RN74 326 aa10.21□□□□□ -0.77
CD44-224ENST00000526669 CXorf1O96002 111 aa10.21□□□□□ -0.77
CD44-224ENST00000526669 ID1P41134 155 aa10.21□□□□□ -0.77
CD44-224ENST00000526669 DPPA3Q6W0C5 159 aa10.21□□□□□ -0.77
CD44-224ENST00000526669 DEFB125Q8N687 156 aa10.21□□□□□ -0.77
CD44-224ENST00000526669 SFT2D1Q8WV19 159 aa10.21□□□□□ -0.77
CD44-224ENST00000526669 SAT2Q96F10 170 aaPredicted RBP10.21□□□□□ -0.77
CD44-224ENST00000526669 ZNF705EA8MWA4 302 aaPredicted RBP10.2□□□□□ -0.78
CD44-224ENST00000526669 ISLRO14498 428 aa10.2□□□□□ -0.78
CD44-224ENST00000526669 NDUFB4O95168 129 aa10.2□□□□□ -0.78
CD44-224ENST00000526669 H2AFB1P0C5Y9 115 aa10.2□□□□□ -0.78
CD44-224ENST00000526669 PSMB3P49720 205 aa10.2□□□□□ -0.78
CD44-224ENST00000526669 RAB5CP51148 216 aa10.2□□□□□ -0.78
CD44-224ENST00000526669 SNRPD3P62318 126 aaKnown RBP10.2□□□□□ -0.78
CD44-224ENST00000526669 Q8N1Y9 231 aa10.2□□□□□ -0.78
CD44-224ENST00000526669 EXOC3-AS1Q8N2X6 119 aa10.2□□□□□ -0.78
CD44-224ENST00000526669 PCNPQ8WW12 178 aaKnown RBP10.2□□□□□ -0.78
CD44-224ENST00000526669 SLC50A1Q9BRV3 221 aa10.2□□□□□ -0.78
CD44-224ENST00000526669 ZNF331Q9NQX6 463 aaPredicted RBP10.2□□□□□ -0.78
CD44-224ENST00000526669 C19orf73Q9NVV2 129 aa10.2□□□□□ -0.78
CD44-224ENST00000526669 KNCNA6PVL3 124 aa10.19□□□□□ -0.78
CD44-224ENST00000526669 ZNF705FA8MVS1 300 aaPredicted RBP10.19□□□□□ -0.78
CD44-224ENST00000526669 K7EIL1 84 aa10.19□□□□□ -0.78
CD44-224ENST00000526669 UBE2G2P60604 165 aa10.19□□□□□ -0.78
CD44-224ENST00000526669 RANP62826 216 aaKnown RBP10.19□□□□□ -0.78
CD44-224ENST00000526669 PSG3Q16557 428 aa10.19□□□□□ -0.78
CD44-224ENST00000526669 GUK1Q16774 197 aa10.19□□□□□ -0.78
CD44-224ENST00000526669 TEX261Q6UWH6 196 aa10.19□□□□□ -0.78
CD44-224ENST00000526669 ZNF738Q8NE65 137 aa10.19□□□□□ -0.78
CD44-224ENST00000526669 MBD3L1Q8WWY6 194 aa10.19□□□□□ -0.78
CD44-224ENST00000526669 SRD5A3Q9H8P0 318 aa10.19□□□□□ -0.78
CD44-224ENST00000526669 F6UB75 175 aa10.18□□□□□ -0.78
CD44-224ENST00000526669 M0R3E3 92 aa10.18□□□□□ -0.78
CD44-224ENST00000526669 PDE6HQ13956 83 aa10.18□□□□□ -0.78
CD44-224ENST00000526669 ICAM4Q14773 271 aa10.18□□□□□ -0.78
CD44-224ENST00000526669 ZNF680Q8NEM1 530 aa10.18□□□□□ -0.78
CD44-224ENST00000526669 CITED4Q96RK1 184 aa10.18□□□□□ -0.78
CD44-224ENST00000526669 Q9H3A6 140 aa10.18□□□□□ -0.78
CD44-224ENST00000526669 TMEM167BQ9NRX6 74 aa10.18□□□□□ -0.78
CD44-224ENST00000526669 ZNF253O75346 499 aa10.17□□□□□ -0.78
CD44-224ENST00000526669 ZNF705DP0CH99 300 aaPredicted RBP10.17□□□□□ -0.78
CD44-224ENST00000526669 ZNF705BP0CI00 300 aaPredicted RBP10.17□□□□□ -0.78
CD44-224ENST00000526669 CCL20P78556 96 aa10.17□□□□□ -0.78
CD44-224ENST00000526669 PSG9Q00887 426 aa10.17□□□□□ -0.78
CD44-224ENST00000526669 GDF5OSQ5U4N7 250 aa10.17□□□□□ -0.78
CD44-224ENST00000526669 SAMD13Q5VXD3 122 aa10.17□□□□□ -0.78
CD44-224ENST00000526669 AAMDCQ9H7C9 122 aa10.17□□□□□ -0.78
CD44-224ENST00000526669 RPH3ALQ9UNE2 315 aa10.17□□□□□ -0.78
CD44-224ENST00000526669 PGPA6NDG6 321 aa10.16□□□□□ -0.78
CD44-224ENST00000526669 PRAC2D3DTV9 90 aa10.16□□□□□ -0.78
CD44-224ENST00000526669 IFNA7P01567 189 aa10.16□□□□□ -0.78
CD44-224ENST00000526669 RPL35AP18077 110 aaKnown RBP10.16□□□□□ -0.78
CD44-224ENST00000526669 CMC4P56277 68 aaPredicted RBP10.16□□□□□ -0.78
CD44-224ENST00000526669 DEFA6Q01524 100 aa10.16□□□□□ -0.78
CD44-224ENST00000526669 ACTL10Q5JWF8 245 aa10.16□□□□□ -0.78
CD44-224ENST00000526669 SUN5Q8TC36 379 aa10.16□□□□□ -0.78
CD44-224ENST00000526669 RPUSD4Q96CM3 377 aaKnown RBP10.16□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 70.2 ms