RNA–Protein interactions for RNA: ENST00000526570.5

FGFR1-227, Transcript of fibroblast growth factor receptor 1, humanhuman

TSL 1 (best)

Gene FGFR1, Length 5,528 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FGFR1-227ENST00000526570 PINLYPA6NC86 204 aa10.11□□□□□ -0.79
FGFR1-227ENST00000526570 B9A039 149 aa10.11□□□□□ -0.79
FGFR1-227ENST00000526570 RNASE2P10153 161 aaKnown RBP10.11□□□□□ -0.79
FGFR1-227ENST00000526570 ZNF726P1Q15940 193 aa10.11□□□□□ -0.79
FGFR1-227ENST00000526570 IGHV3-72A0A0B4J1Y9 119 aa10.11□□□□□ -0.79
FGFR1-227ENST00000526570 VWC2Q2TAL6 325 aa10.11□□□□□ -0.79
FGFR1-227ENST00000526570 SPTSSBQ8NFR3 76 aa10.11□□□□□ -0.79
FGFR1-227ENST00000526570 TRAV12-1A0A0B4J245 112 aa10.11□□□□□ -0.79
FGFR1-227ENST00000526570 CECR9P0C854 216 aa10.11□□□□□ -0.79
FGFR1-227ENST00000526570 BSPH1Q075Z2 132 aa10.11□□□□□ -0.79
FGFR1-227ENST00000526570 TREML4Q6UXN2 200 aa10.11□□□□□ -0.79
FGFR1-227ENST00000526570 PAX1P15863 534 aa10.11□□□□□ -0.79
FGFR1-227ENST00000526570 IGHV1-2P23083 117 aa10.11□□□□□ -0.79
FGFR1-227ENST00000526570 OSR1Q8TAX0 266 aaPredicted RBP10.11□□□□□ -0.79
FGFR1-227ENST00000526570 THADAQ6YHU6 1953 aa10.1□□□□□ -0.79
FGFR1-227ENST00000526570 A0A0B4J2C4 111 aa10.1□□□□□ -0.79
FGFR1-227ENST00000526570 NPPCP23582 126 aa10.1□□□□□ -0.79
FGFR1-227ENST00000526570 ZC2HC1AQ96GY0 325 aa10.1□□□□□ -0.79
FGFR1-227ENST00000526570 GFRA4Q9GZZ7 299 aa10.1□□□□□ -0.79
FGFR1-227ENST00000526570 RPUSD1Q9UJJ7 312 aaKnown RBP10.1□□□□□ -0.79
FGFR1-227ENST00000526570 TIMM21Q9BVV7 248 aa10.1□□□□□ -0.79
FGFR1-227ENST00000526570 IDI2-AS1Q9NZ38 188 aa10.1□□□□□ -0.79
FGFR1-227ENST00000526570 TMEM14EPQ6UXP3 125 aa10.09□□□□□ -0.79
FGFR1-227ENST00000526570 RETNQ9HD89 108 aa10.09□□□□□ -0.79
FGFR1-227ENST00000526570 LINC00527Q9UJ94 153 aa10.09□□□□□ -0.79
FGFR1-227ENST00000526570 SMIM9A6NGZ8 99 aa10.09□□□□□ -0.79
FGFR1-227ENST00000526570 MT-ATP8P03928 68 aa10.09□□□□□ -0.79
FGFR1-227ENST00000526570 QRFPP83859 136 aa10.09□□□□□ -0.79
FGFR1-227ENST00000526570 C5orf64Q2M2E5 130 aa10.09□□□□□ -0.79
FGFR1-227ENST00000526570 RPL39P5Q59GN2 51 aa10.09□□□□□ -0.79
FGFR1-227ENST00000526570 SPRR3Q9UBC9 169 aa10.09□□□□□ -0.79
FGFR1-227ENST00000526570 EP300Q09472 2414 aaPredicted RBP10.09□□□□□ -0.79
FGFR1-227ENST00000526570 FAM90A9PA6NNJ1 464 aa10.09□□□□□ -0.79
FGFR1-227ENST00000526570 DOCK9Q9BZ29 2069 aa10.09□□□□□ -0.79
FGFR1-227ENST00000526570 RASL10AQ92737 203 aa10.09□□□□□ -0.79
FGFR1-227ENST00000526570 TCRAP04437 139 aa10.08□□□□□ -0.8
FGFR1-227ENST00000526570 ZNF837Q96EG3 531 aaPredicted RBP10.08□□□□□ -0.8
FGFR1-227ENST00000526570 IGHG2P01859 326 aa10.08□□□□□ -0.8
FGFR1-227ENST00000526570 HERVK_113P63121 156 aa10.08□□□□□ -0.8
FGFR1-227ENST00000526570 PYGO2Q9BRQ0 406 aa10.08□□□□□ -0.8
FGFR1-227ENST00000526570 ACP7Q6ZNF0 438 aa10.08□□□□□ -0.8
FGFR1-227ENST00000526570 LEAP2Q969E1 77 aa10.08□□□□□ -0.8
FGFR1-227ENST00000526570 SAA2-SAA4A0A096LPE2 208 aa10.08□□□□□ -0.8
FGFR1-227ENST00000526570 CHCHD5Q9BSY4 110 aa10.08□□□□□ -0.8
FGFR1-227ENST00000526570 FOXG1P55316 489 aaPredicted RBP10.08□□□□□ -0.8
FGFR1-227ENST00000526570 IGHV3OR16-10A0A075B7F0 116 aa10.07□□□□□ -0.8
FGFR1-227ENST00000526570 CELA3BP08861 270 aa10.07□□□□□ -0.8
FGFR1-227ENST00000526570 CFC1BP0CG36 223 aa10.07□□□□□ -0.8
FGFR1-227ENST00000526570 CFC1P0CG37 223 aa10.07□□□□□ -0.8
FGFR1-227ENST00000526570 C1orf162Q8NEQ5 155 aaPredicted RBP10.07□□□□□ -0.8
FGFR1-227ENST00000526570 LYZL4Q96KX0 146 aa10.07□□□□□ -0.8
FGFR1-227ENST00000526570 PLXNA3P51805 1871 aa10.07□□□□□ -0.8
FGFR1-227ENST00000526570 TCRBV4S1A1TA0A5B7 111 aa10.07□□□□□ -0.8
FGFR1-227ENST00000526570 PSMB8P28062 276 aa10.07□□□□□ -0.8
FGFR1-227ENST00000526570 LRRC75A-AS1Q8N1F1 130 aa10.07□□□□□ -0.8
FGFR1-227ENST00000526570 V9GYV3 84 aa10.07□□□□□ -0.8
FGFR1-227ENST00000526570 C12orf77C9JDV5 145 aa10.07□□□□□ -0.8
FGFR1-227ENST00000526570 HLA-DRB4P13762 266 aa10.07□□□□□ -0.8
FGFR1-227ENST00000526570 SUMO4Q6EEV6 95 aa10.07□□□□□ -0.8
FGFR1-227ENST00000526570 C20orf78Q9BR46 151 aa10.07□□□□□ -0.8
FGFR1-227ENST00000526570 HLA-DRB4X5D2U9 266 aa10.07□□□□□ -0.8
FGFR1-227ENST00000526570 CFPP27918 469 aa10.06□□□□□ -0.8
FGFR1-227ENST00000526570 LIME1Q9H400 295 aa10.06□□□□□ -0.8
FGFR1-227ENST00000526570 F6UB75 175 aa10.06□□□□□ -0.8
FGFR1-227ENST00000526570 SMKR1H3BMG3 65 aa10.06□□□□□ -0.8
FGFR1-227ENST00000526570 Q0VFX4 171 aa10.06□□□□□ -0.8
FGFR1-227ENST00000526570 TMEM42Q69YG0 159 aa10.06□□□□□ -0.8
FGFR1-227ENST00000526570 NDUFC2-KCTD14E9PQ53 114 aa10.06□□□□□ -0.8
FGFR1-227ENST00000526570 C3orf22Q8N5N4 141 aa10.06□□□□□ -0.8
FGFR1-227ENST00000526570 CYYR1Q96J86 154 aa10.06□□□□□ -0.8
FGFR1-227ENST00000526570 FAM110AQ9BQ89 295 aa10.05□□□□□ -0.8
FGFR1-227ENST00000526570 IGHV3OR16-12A0A075B7B8 117 aa10.05□□□□□ -0.8
FGFR1-227ENST00000526570 RNASE4P34096 147 aaKnown RBP10.05□□□□□ -0.8
FGFR1-227ENST00000526570 LY6EQ16553 131 aa10.05□□□□□ -0.8
FGFR1-227ENST00000526570 RNASE6Q93091 150 aaKnown RBP10.05□□□□□ -0.8
FGFR1-227ENST00000526570 SCRT2Q9NQ03 307 aa10.05□□□□□ -0.8
FGFR1-227ENST00000526570 TANC1Q9C0D5 1861 aa10.05□□□□□ -0.8
FGFR1-227ENST00000526570 NDUFB8O95169 186 aa10.05□□□□□ -0.8
FGFR1-227ENST00000526570 IGKV1-5P01602 117 aa10.05□□□□□ -0.8
FGFR1-227ENST00000526570 IGLV3-32A0A0A0MS00 114 aa10.05□□□□□ -0.8
FGFR1-227ENST00000526570 TINCRA0A1B0GVN0 87 aa10.05□□□□□ -0.8
FGFR1-227ENST00000526570 TMEM219Q86XT9 240 aa10.05□□□□□ -0.8
FGFR1-227ENST00000526570 C8orf31Q8N9H6 132 aa10.05□□□□□ -0.8
FGFR1-227ENST00000526570 FAM236DA0A1B0GTK5 79 aa10.05□□□□□ -0.8
FGFR1-227ENST00000526570 FAM236CP0DP71 79 aa10.05□□□□□ -0.8
FGFR1-227ENST00000526570 CD24P25063 80 aa10.05□□□□□ -0.8
FGFR1-227ENST00000526570 CXCL5P42830 114 aa10.05□□□□□ -0.8
FGFR1-227ENST00000526570 ANAPC10Q9UM13 185 aa10.05□□□□□ -0.8
FGFR1-227ENST00000526570 CHD3Q12873 2000 aaKnown RBP10.04□□□□□ -0.8
FGFR1-227ENST00000526570 VCYO14598 125 aa10.04□□□□□ -0.8
FGFR1-227ENST00000526570 WFDC9Q8NEX5 89 aa10.04□□□□□ -0.8
FGFR1-227ENST00000526570 PLA2G2EQ9NZK7 142 aa10.04□□□□□ -0.8
FGFR1-227ENST00000526570 PRB3Q04118 309 aaPredicted RBP10.04□□□□□ -0.8
FGFR1-227ENST00000526570 FAM201AQ5SY85 155 aa10.04□□□□□ -0.8
FGFR1-227ENST00000526570 FAM90A1Q86YD7 464 aa10.04□□□□□ -0.8
FGFR1-227ENST00000526570 NBL1P41271 181 aa10.04□□□□□ -0.8
FGFR1-227ENST00000526570 ZNRF1Q8ND25 227 aa10.04□□□□□ -0.8
FGFR1-227ENST00000526570 WFDC11Q8NEX6 87 aa10.04□□□□□ -0.8
FGFR1-227ENST00000526570 IGKV3D-7A0A0C4DH55 119 aa10.04□□□□□ -0.8
FGFR1-227ENST00000526570 SMIM27A0A1W2PRY6 76 aa10.04□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 62.4 ms