RNA–Protein interactions for RNA: ENST00000524556.1

CSTF3-204, Transcript of cleavage stimulation factor subunit 3, humanhuman

TSL 3

Gene CSTF3, Length 558 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSTF3-204ENST00000524556 GAGE12GP0CL81 117 aa10.11□□□□□ -0.79
CSTF3-204ENST00000524556 GAGE12IP0CL82 117 aa10.11□□□□□ -0.79
CSTF3-204ENST00000524556 SLC25A6P12236 298 aa10.11□□□□□ -0.79
CSTF3-204ENST00000524556 FUSP35637 526 aaKnown RBP eCLIP10.11□□□□□ -0.79
CSTF3-204ENST00000524556 CCDC28AQ8IWP9 274 aa10.11□□□□□ -0.79
CSTF3-204ENST00000524556 CIB3Q96Q77 187 aaPredicted RBP10.11□□□□□ -0.79
CSTF3-204ENST00000524556 HIGD1AQ9Y241 93 aa10.11□□□□□ -0.79
CSTF3-204ENST00000524556 CTDSP2O14595 271 aa10.1□□□□□ -0.79
CSTF3-204ENST00000524556 EREGO14944 169 aa10.1□□□□□ -0.79
CSTF3-204ENST00000524556 RGS5O15539 181 aa10.1□□□□□ -0.79
CSTF3-204ENST00000524556 HYPMO75409 117 aa10.1□□□□□ -0.79
CSTF3-204ENST00000524556 RLN2P04090 185 aa10.1□□□□□ -0.79
CSTF3-204ENST00000524556 PRB4P10163 310 aaPredicted RBP10.1□□□□□ -0.79
CSTF3-204ENST00000524556 RAP2BP61225 183 aa10.1□□□□□ -0.79
CSTF3-204ENST00000524556 AKR1C1Q04828 323 aa10.1□□□□□ -0.79
CSTF3-204ENST00000524556 KIR3DS1Q14943 382 aa10.1□□□□□ -0.79
CSTF3-204ENST00000524556 CDPF1Q6NVV7 123 aa10.1□□□□□ -0.79
CSTF3-204ENST00000524556 CYP2G1PQ6ZSU1 146 aa10.1□□□□□ -0.79
CSTF3-204ENST00000524556 LRRC20Q8TCA0 184 aa10.1□□□□□ -0.79
CSTF3-204ENST00000524556 FRZBQ92765 325 aa10.1□□□□□ -0.79
CSTF3-204ENST00000524556 RPUSD4Q96CM3 377 aaKnown RBP10.1□□□□□ -0.79
CSTF3-204ENST00000524556 WRBO00258 174 aa10.09□□□□□ -0.79
CSTF3-204ENST00000524556 SYNGR2O43760 224 aa10.09□□□□□ -0.79
CSTF3-204ENST00000524556 IL5P05113 134 aa10.09□□□□□ -0.79
CSTF3-204ENST00000524556 PLP1P60201 277 aa10.09□□□□□ -0.79
CSTF3-204ENST00000524556 A0A096LPF7 62 aa10.08□□□□□ -0.8
CSTF3-204ENST00000524556 SNURFLB1AK76 121 aa10.08□□□□□ -0.8
CSTF3-204ENST00000524556 ERVFC1-1P60608 527 aa10.08□□□□□ -0.8
CSTF3-204ENST00000524556 IL18Q14116 193 aa10.08□□□□□ -0.8
CSTF3-204ENST00000524556 SPANXN5Q5MJ07 72 aa10.08□□□□□ -0.8
CSTF3-204ENST00000524556 ACOT7LQ6ZUV0 252 aa10.08□□□□□ -0.8
CSTF3-204ENST00000524556 VSIG2Q96IQ7 327 aa10.08□□□□□ -0.8
CSTF3-204ENST00000524556 TMPRSS5Q9H3S3 457 aa10.08□□□□□ -0.8
CSTF3-204ENST00000524556 MCUBQ9NWR8 336 aa10.08□□□□□ -0.8
CSTF3-204ENST00000524556 RABL2AQ9UBK7 228 aaPredicted RBP10.08□□□□□ -0.8
CSTF3-204ENST00000524556 RABL2BQ9UNT1 228 aa10.08□□□□□ -0.8
CSTF3-204ENST00000524556 MRPS12O15235 138 aaKnown RBP10.07□□□□□ -0.8
CSTF3-204ENST00000524556 SIVA1O15304 175 aa10.07□□□□□ -0.8
CSTF3-204ENST00000524556 OR5G3P0C626 314 aa10.07□□□□□ -0.8
CSTF3-204ENST00000524556 KRTAP10-1P60331 282 aa10.07□□□□□ -0.8
CSTF3-204ENST00000524556 GFI1BQ5VTD9 330 aa10.07□□□□□ -0.8
CSTF3-204ENST00000524556 LRTM2Q8N967 370 aa10.07□□□□□ -0.8
CSTF3-204ENST00000524556 DIRAS2Q96HU8 199 aa10.07□□□□□ -0.8
CSTF3-204ENST00000524556 PARD6GQ9BYG4 376 aaPredicted RBP10.07□□□□□ -0.8
CSTF3-204ENST00000524556 STRAPQ9Y3F4 350 aaKnown RBP10.07□□□□□ -0.8
CSTF3-204ENST00000524556 SMCO3A2RU48 225 aa10.06□□□□□ -0.8
CSTF3-204ENST00000524556 PMS2P5A8MQ11 134 aa10.06□□□□□ -0.8
CSTF3-204ENST00000524556 H3BP45 60 aa10.06□□□□□ -0.8
CSTF3-204ENST00000524556 LINC00869P0C866 280 aa10.06□□□□□ -0.8
CSTF3-204ENST00000524556 CXCL2P19875 107 aa10.06□□□□□ -0.8
CSTF3-204ENST00000524556 SELENOTP62341 195 aa10.06□□□□□ -0.8
CSTF3-204ENST00000524556 DAZ2Q13117 558 aaKnown RBP10.06□□□□□ -0.8
CSTF3-204ENST00000524556 TMEM128Q5BJH2 165 aa10.06□□□□□ -0.8
CSTF3-204ENST00000524556 PATE2Q6UY27 113 aa10.06□□□□□ -0.8
CSTF3-204ENST00000524556 Q6ZTI0 123 aa10.06□□□□□ -0.8
CSTF3-204ENST00000524556 S100A7AQ86SG5 101 aa10.06□□□□□ -0.8
CSTF3-204ENST00000524556 IFNA5P01569 189 aa10.05□□□□□ -0.8
CSTF3-204ENST00000524556 ANXA7P20073 488 aaKnown RBP10.05□□□□□ -0.8
CSTF3-204ENST00000524556 TMED4Q7Z7H5 227 aa10.05□□□□□ -0.8
CSTF3-204ENST00000524556 ZNF331Q9NQX6 463 aaPredicted RBP10.05□□□□□ -0.8
CSTF3-204ENST00000524556 RNF24Q9Y225 148 aa10.05□□□□□ -0.8
CSTF3-204ENST00000524556 TNFRSF18Q9Y5U5 241 aa10.05□□□□□ -0.8
CSTF3-204ENST00000524556 PRAC2D3DTV9 90 aa10.04□□□□□ -0.8
CSTF3-204ENST00000524556 LCN15Q6UWW0 184 aa10.04□□□□□ -0.8
CSTF3-204ENST00000524556 CCDC190Q86UF4 302 aa10.04□□□□□ -0.8
CSTF3-204ENST00000524556 SLC50A1Q9BRV3 221 aa10.04□□□□□ -0.8
CSTF3-204ENST00000524556 ARL6Q9H0F7 186 aa10.04□□□□□ -0.8
CSTF3-204ENST00000524556 MDFICQ9P1T7 246 aa10.04□□□□□ -0.8
CSTF3-204ENST00000524556 DNAH8Q96JB1 4490 aa10.03□□□□□ -0.8
CSTF3-204ENST00000524556 TRGV2A0A075B6R0 118 aa10.03□□□□□ -0.8
CSTF3-204ENST00000524556 A0A087WTM6 91 aa10.03□□□□□ -0.8
CSTF3-204ENST00000524556 TRAV12-3A0A0B4J271 114 aa10.03□□□□□ -0.8
CSTF3-204ENST00000524556 NXPH4O95158 308 aa10.03□□□□□ -0.8
CSTF3-204ENST00000524556 SMR3BP02814 79 aaPredicted RBP10.03□□□□□ -0.8
CSTF3-204ENST00000524556 VAMP1P23763 118 aa10.03□□□□□ -0.8
CSTF3-204ENST00000524556 ICAM4Q14773 271 aa10.03□□□□□ -0.8
CSTF3-204ENST00000524556 NFE4Q86UQ8 179 aa10.03□□□□□ -0.8
CSTF3-204ENST00000524556 C18orf15Q96N68 181 aa10.03□□□□□ -0.8
CSTF3-204ENST00000524556 PYGO2Q9BRQ0 406 aa10.03□□□□□ -0.8
CSTF3-204ENST00000524556 ARV1Q9H2C2 271 aa10.03□□□□□ -0.8
CSTF3-204ENST00000524556 RSL24D1Q9UHA3 163 aaKnown RBP10.03□□□□□ -0.8
CSTF3-204ENST00000524556 J3KRW8 73 aa10.02□□□□□ -0.81
CSTF3-204ENST00000524556 HOXB5P09067 269 aa10.02□□□□□ -0.81
CSTF3-204ENST00000524556 SNRPCP09234 159 aaKnown RBP10.02□□□□□ -0.81
CSTF3-204ENST00000524556 DNAH10OSP0CZ25 163 aa10.02□□□□□ -0.81
CSTF3-204ENST00000524556 SPCS2Q15005 226 aa10.02□□□□□ -0.81
CSTF3-204ENST00000524556 ZBTB8BQ8NAP8 495 aaPredicted RBP10.02□□□□□ -0.81
CSTF3-204ENST00000524556 FAM229AH3BQW9 127 aa10.01□□□□□ -0.81
CSTF3-204ENST00000524556 K7EPK0 472 aa10.01□□□□□ -0.81
CSTF3-204ENST00000524556 SFT2D2O95562 160 aa10.01□□□□□ -0.81
CSTF3-204ENST00000524556 CT45A10P0DMU9 189 aa10.01□□□□□ -0.81
CSTF3-204ENST00000524556 LEPP41159 167 aa10.01□□□□□ -0.81
CSTF3-204ENST00000524556 ID3Q02535 119 aa10.01□□□□□ -0.81
CSTF3-204ENST00000524556 C4orf46Q504U0 113 aa10.01□□□□□ -0.81
CSTF3-204ENST00000524556 PXDC1Q5TGL8 231 aa10.01□□□□□ -0.81
CSTF3-204ENST00000524556 LINC00305Q7Z4B0 112 aa10.01□□□□□ -0.81
CSTF3-204ENST00000524556 ZNF431Q8TF32 576 aaPredicted RBP10.01□□□□□ -0.81
CSTF3-204ENST00000524556 ODF3Q96PU9 254 aa10.01□□□□□ -0.81
CSTF3-204ENST00000524556 NPVFQ9HCQ7 196 aa10.01□□□□□ -0.81
CSTF3-204ENST00000524556 GSN-AS1Q9NRJ2 163 aa10.01□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 51.2 ms