RNA–Protein interactions for RNA: ENST00000523483.5

SDCBP-212, Transcript of syndecan binding protein, humanhuman

TSL 2 BASIC

Gene SDCBP, Length 3,589 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-212ENST00000523483 CHEK1O14757 476 aa7.1□□□□□ -1.27
SDCBP-212ENST00000523483 ATP6V1G1O75348 118 aa7.1□□□□□ -1.27
SDCBP-212ENST00000523483 SLC25A5P05141 298 aaKnown RBP7.1□□□□□ -1.27
SDCBP-212ENST00000523483 HLA-DMBP28068 263 aa7.1□□□□□ -1.27
SDCBP-212ENST00000523483 GNG5P63218 68 aa7.1□□□□□ -1.27
SDCBP-212ENST00000523483 CMTM2Q8TAZ6 248 aa7.1□□□□□ -1.27
SDCBP-212ENST00000523483 C16orf92Q96LL3 132 aa7.1□□□□□ -1.27
SDCBP-212ENST00000523483 HIST1H1EP10412 219 aaKnown RBP7.1□□□□□ -1.27
SDCBP-212ENST00000523483 MEF2BQ02080 365 aaPredicted RBP7.1□□□□□ -1.27
SDCBP-212ENST00000523483 Q9H3A6 140 aa7.1□□□□□ -1.27
SDCBP-212ENST00000523483 AAMDCQ9H7C9 122 aa7.1□□□□□ -1.27
SDCBP-212ENST00000523483 TRAV1-1A0A0B4J248 108 aa7.09□□□□□ -1.27
SDCBP-212ENST00000523483 PEA15Q15121 130 aa7.09□□□□□ -1.27
SDCBP-212ENST00000523483 MED9Q9NWA0 146 aa7.09□□□□□ -1.27
SDCBP-212ENST00000523483 VAX2Q9UIW0 290 aa7.09□□□□□ -1.27
SDCBP-212ENST00000523483 FAM74A7A6NL05 159 aa7.09□□□□□ -1.27
SDCBP-212ENST00000523483 GGTLC3B5MD39 225 aa7.09□□□□□ -1.27
SDCBP-212ENST00000523483 C9JQL5 133 aa7.09□□□□□ -1.27
SDCBP-212ENST00000523483 BMI1P35226 326 aa7.09□□□□□ -1.27
SDCBP-212ENST00000523483 DEFB1P60022 68 aa7.09□□□□□ -1.27
SDCBP-212ENST00000523483 NDUFA5Q16718 116 aa7.09□□□□□ -1.27
SDCBP-212ENST00000523483 LURAP1LQ8IV03 231 aa7.09□□□□□ -1.27
SDCBP-212ENST00000523483 CYB561D1Q8N8Q1 229 aa7.09□□□□□ -1.27
SDCBP-212ENST00000523483 ASCL2Q99929 193 aa7.09□□□□□ -1.27
SDCBP-212ENST00000523483 MANBALQ9NQG1 85 aa7.09□□□□□ -1.27
SDCBP-212ENST00000523483 MLXQ9UH92 298 aa7.09□□□□□ -1.27
SDCBP-212ENST00000523483 LINC00862A6NCI5 91 aa7.09□□□□□ -1.28
SDCBP-212ENST00000523483 CITED1Q99966 193 aa7.09□□□□□ -1.28
SDCBP-212ENST00000523483 AURKAIP1Q9NWT8 199 aaPredicted RBP7.09□□□□□ -1.28
SDCBP-212ENST00000523483 SMAD5-AS1Q9Y6J3 95 aa7.09□□□□□ -1.28
SDCBP-212ENST00000523483 LOC102723971A0A1B0GUV8 181 aa7.08□□□□□ -1.28
SDCBP-212ENST00000523483 SCO2A0A1W2PP80 73 aa7.08□□□□□ -1.28
SDCBP-212ENST00000523483 ZNF705FA8MVS1 300 aaPredicted RBP7.08□□□□□ -1.28
SDCBP-212ENST00000523483 ZNF688P0C7X2 276 aa7.08□□□□□ -1.28
SDCBP-212ENST00000523483 C16orf54Q6UWD8 224 aa7.08□□□□□ -1.28
SDCBP-212ENST00000523483 SPATA3Q8NHX4 192 aa7.08□□□□□ -1.28
SDCBP-212ENST00000523483 LYPD6BQ8NI32 183 aa7.08□□□□□ -1.28
SDCBP-212ENST00000523483 RNF24Q9Y225 148 aa7.08□□□□□ -1.28
SDCBP-212ENST00000523483 TRBV19A0A075B6N1 114 aa7.08□□□□□ -1.28
SDCBP-212ENST00000523483 TRAV34A0A0B4J273 112 aa7.08□□□□□ -1.28
SDCBP-212ENST00000523483 HELTA6NFD8 242 aa7.08□□□□□ -1.28
SDCBP-212ENST00000523483 NDUFB4O95168 129 aa7.08□□□□□ -1.28
SDCBP-212ENST00000523483 SFTA3P0C7M3 94 aa7.08□□□□□ -1.28
SDCBP-212ENST00000523483 IGLC2P0DOY2 106 aa7.08□□□□□ -1.28
SDCBP-212ENST00000523483 CD300EQ496F6 205 aaPredicted RBP7.08□□□□□ -1.28
SDCBP-212ENST00000523483 TMEM61Q8N0U2 210 aa7.08□□□□□ -1.28
SDCBP-212ENST00000523483 GLMPQ8WWB7 406 aa7.08□□□□□ -1.28
SDCBP-212ENST00000523483 LINC00479Q96M42 142 aa7.08□□□□□ -1.28
SDCBP-212ENST00000523483 PKD1L1Q8TDX9 2849 aa7.08□□□□□ -1.28
SDCBP-212ENST00000523483 F8W036 122 aa7.08□□□□□ -1.28
SDCBP-212ENST00000523483 ZNF705DP0CH99 300 aaPredicted RBP7.08□□□□□ -1.28
SDCBP-212ENST00000523483 ZNF705BP0CI00 300 aaPredicted RBP7.08□□□□□ -1.28
SDCBP-212ENST00000523483 CD33P20138 364 aa7.08□□□□□ -1.28
SDCBP-212ENST00000523483 MYCNOSP40205 109 aa7.08□□□□□ -1.28
SDCBP-212ENST00000523483 REC114Q7Z4M0 266 aa7.08□□□□□ -1.28
SDCBP-212ENST00000523483 DERL1Q9BUN8 251 aa7.08□□□□□ -1.28
SDCBP-212ENST00000523483 NRN1Q9NPD7 142 aa7.08□□□□□ -1.28
SDCBP-212ENST00000523483 K7EMT4 169 aa7.07□□□□□ -1.28
SDCBP-212ENST00000523483 LGALS9O00182 355 aa7.07□□□□□ -1.28
SDCBP-212ENST00000523483 CD81P60033 236 aa7.07□□□□□ -1.28
SDCBP-212ENST00000523483 FHL3Q13643 280 aa7.07□□□□□ -1.28
SDCBP-212ENST00000523483 GOLT1AQ6ZVE7 132 aa7.07□□□□□ -1.28
SDCBP-212ENST00000523483 TRAV8-1A0A0A6YYK1 113 aa7.07□□□□□ -1.28
SDCBP-212ENST00000523483 A8MWP6 167 aa7.07□□□□□ -1.28
SDCBP-212ENST00000523483 IGKV3-20P01619 116 aa7.07□□□□□ -1.28
SDCBP-212ENST00000523483 APOC3P02656 99 aa7.07□□□□□ -1.28
SDCBP-212ENST00000523483 PAFAH1B2P68402 229 aa7.07□□□□□ -1.28
SDCBP-212ENST00000523483 SOHLH1Q5JUK2 328 aa7.07□□□□□ -1.28
SDCBP-212ENST00000523483 C1orf194Q5T5A4 169 aa7.07□□□□□ -1.28
SDCBP-212ENST00000523483 ADAMTSL5Q6ZMM2 481 aa7.07□□□□□ -1.28
SDCBP-212ENST00000523483 ZNF738Q8NE65 137 aa7.07□□□□□ -1.28
SDCBP-212ENST00000523483 MDFIQ99750 246 aa7.07□□□□□ -1.28
SDCBP-212ENST00000523483 RAB19A4D1S5 217 aa7.07□□□□□ -1.28
SDCBP-212ENST00000523483 CSN3P07498 182 aa7.07□□□□□ -1.28
SDCBP-212ENST00000523483 CSN1S1P47710 185 aa7.07□□□□□ -1.28
SDCBP-212ENST00000523483 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa7.07□□□□□ -1.28
SDCBP-212ENST00000523483 NHLRC2Q8NBF2 726 aa7.07□□□□□ -1.28
SDCBP-212ENST00000523483 MS4A6AQ9H2W1 248 aa7.07□□□□□ -1.28
SDCBP-212ENST00000523483 TMEM14CQ9P0S9 112 aa7.07□□□□□ -1.28
SDCBP-212ENST00000523483 IZUMO1RA6ND01 250 aa7.06□□□□□ -1.28
SDCBP-212ENST00000523483 J3KRW8 73 aa7.06□□□□□ -1.28
SDCBP-212ENST00000523483 PSMG4Q5JS54 123 aa7.06□□□□□ -1.28
SDCBP-212ENST00000523483 ZNF506Q5JVG8 444 aa7.06□□□□□ -1.28
SDCBP-212ENST00000523483 GPR82Q96P67 336 aa7.06□□□□□ -1.28
SDCBP-212ENST00000523483 U3KQE9 123 aa7.06□□□□□ -1.28
SDCBP-212ENST00000523483 IGKV2-40A0A087WW87 121 aaPredicted RBP7.06□□□□□ -1.28
SDCBP-212ENST00000523483 MRPS12O15235 138 aaKnown RBP7.06□□□□□ -1.28
SDCBP-212ENST00000523483 IGKV2D-40P01614 121 aaPredicted RBP7.06□□□□□ -1.28
SDCBP-212ENST00000523483 SMIM7Q9BQ49 75 aa7.06□□□□□ -1.28
SDCBP-212ENST00000523483 SLC35B3Q9H1N7 401 aa7.06□□□□□ -1.28
SDCBP-212ENST00000523483 A0A1W2PRE2 83 aa7.05□□□□□ -1.28
SDCBP-212ENST00000523483 PGPEP1LA6NFU8 196 aa7.05□□□□□ -1.28
SDCBP-212ENST00000523483 ZNF727A8MUV8 499 aa7.05□□□□□ -1.28
SDCBP-212ENST00000523483 F6UB75 175 aa7.05□□□□□ -1.28
SDCBP-212ENST00000523483 AKR1C3P42330 323 aa7.05□□□□□ -1.28
SDCBP-212ENST00000523483 UBE2G1P62253 170 aa7.05□□□□□ -1.28
SDCBP-212ENST00000523483 ZNF331Q9NQX6 463 aaPredicted RBP7.05□□□□□ -1.28
SDCBP-212ENST00000523483 F6UZH7 168 aa7.05□□□□□ -1.28
SDCBP-212ENST00000523483 PSG9Q00887 426 aa7.05□□□□□ -1.28
SDCBP-212ENST00000523483 SHISA2Q6UWI4 295 aa7.05□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 49.3 ms