RNA–Protein interactions for RNA: ENST00000523088.5

HDAC3-216, Transcript of histone deacetylase 3, humanhuman

TSL 3

Gene HDAC3, Length 699 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-216ENST00000523088 C12orf73Q69YU5 71 aa6.03□□□□□ -1.44
HDAC3-216ENST00000523088 TMEM136Q6ZRR5 245 aa6.03□□□□□ -1.44
HDAC3-216ENST00000523088 FAM57BQ71RH2 274 aa6.03□□□□□ -1.44
HDAC3-216ENST00000523088 ANKRD29Q8N6D5 301 aa6.03□□□□□ -1.44
HDAC3-216ENST00000523088 MYOZ3Q8TDC0 251 aa6.03□□□□□ -1.44
HDAC3-216ENST00000523088 CARD19Q96LW7 228 aa6.03□□□□□ -1.44
HDAC3-216ENST00000523088 LINC00479Q96M42 142 aa6.03□□□□□ -1.44
HDAC3-216ENST00000523088 CXXC4Q9H2H0 198 aa6.03□□□□□ -1.44
HDAC3-216ENST00000523088 CMC2Q9NRP2 79 aa6.03□□□□□ -1.44
HDAC3-216ENST00000523088 PLA2G2EQ9NZK7 142 aa6.03□□□□□ -1.44
HDAC3-216ENST00000523088 RNF7Q9UBF6 113 aa6.03□□□□□ -1.44
HDAC3-216ENST00000523088 TP53TG3Q9ULZ0 132 aa6.03□□□□□ -1.44
HDAC3-216ENST00000523088 TEP1Q99973 2627 aaKnown RBP6.03□□□□□ -1.44
HDAC3-216ENST00000523088 PCNX3Q9H6A9 2034 aa6.03□□□□□ -1.44
HDAC3-216ENST00000523088 KIAA1549Q9HCM3 1950 aa6.02□□□□□ -1.45
HDAC3-216ENST00000523088 TRBV7-7A0A0K0K1E9 115 aa6.02□□□□□ -1.45
HDAC3-216ENST00000523088 BUB3O43684 328 aa6.02□□□□□ -1.45
HDAC3-216ENST00000523088 FGF6P10767 208 aa6.02□□□□□ -1.45
HDAC3-216ENST00000523088 RPL11P62913 178 aaKnown RBP6.02□□□□□ -1.45
HDAC3-216ENST00000523088 PRR20EP86478 221 aa6.02□□□□□ -1.45
HDAC3-216ENST00000523088 PRR20CP86479 221 aa6.02□□□□□ -1.45
HDAC3-216ENST00000523088 PRR20DP86480 221 aa6.02□□□□□ -1.45
HDAC3-216ENST00000523088 PRR20BP86481 221 aa6.02□□□□□ -1.45
HDAC3-216ENST00000523088 PRR20AP86496 221 aa6.02□□□□□ -1.45
HDAC3-216ENST00000523088 C12orf74Q32Q52 190 aa6.02□□□□□ -1.45
HDAC3-216ENST00000523088 ANXA2RQ3ZCQ2 193 aa6.02□□□□□ -1.45
HDAC3-216ENST00000523088 AAED1Q7RTV5 226 aa6.02□□□□□ -1.45
HDAC3-216ENST00000523088 HAPLN4Q86UW8 402 aa6.02□□□□□ -1.45
HDAC3-216ENST00000523088 C9orf106Q8NAJ2 232 aa6.02□□□□□ -1.45
HDAC3-216ENST00000523088 FMC1Q96HJ9 113 aa6.02□□□□□ -1.45
HDAC3-216ENST00000523088 RTL8AQ9BWD3 113 aa6.02□□□□□ -1.45
HDAC3-216ENST00000523088 AGPAT4-IT1Q9H0P7 198 aa6.02□□□□□ -1.45
HDAC3-216ENST00000523088 LSM4Q9Y4Z0 139 aaKnown RBP6.02□□□□□ -1.45
HDAC3-216ENST00000523088 DSPPQ9NZW4 1301 aa6.01□□□□□ -1.45
HDAC3-216ENST00000523088 HIVEP1P15822 2718 aa6.01□□□□□ -1.45
HDAC3-216ENST00000523088 TRAV27A0A087WT01 109 aa6.01□□□□□ -1.45
HDAC3-216ENST00000523088 A0A1B0GWB2 263 aa6.01□□□□□ -1.45
HDAC3-216ENST00000523088 SHISA3A0PJX4 238 aa6.01□□□□□ -1.45
HDAC3-216ENST00000523088 FCN1O00602 326 aa6.01□□□□□ -1.45
HDAC3-216ENST00000523088 GPR137BO60478 399 aa6.01□□□□□ -1.45
HDAC3-216ENST00000523088 PRH1P02810 166 aa6.01□□□□□ -1.45
HDAC3-216ENST00000523088 PYYP10082 97 aa6.01□□□□□ -1.45
HDAC3-216ENST00000523088 FSTP19883 344 aa6.01□□□□□ -1.45
HDAC3-216ENST00000523088 CBLN1P23435 193 aa6.01□□□□□ -1.45
HDAC3-216ENST00000523088 GATA2P23769 480 aaPredicted RBP6.01□□□□□ -1.45
HDAC3-216ENST00000523088 MPV17P39210 176 aa6.01□□□□□ -1.45
HDAC3-216ENST00000523088 B3GALT5-AS1P59052 145 aa6.01□□□□□ -1.45
HDAC3-216ENST00000523088 KRTAP10-9P60411 292 aa6.01□□□□□ -1.45
HDAC3-216ENST00000523088 POU3F1Q03052 451 aaPredicted RBP6.01□□□□□ -1.45
HDAC3-216ENST00000523088 LTBQ06643 244 aa6.01□□□□□ -1.45
HDAC3-216ENST00000523088 TEN1Q86WV5 123 aa6.01□□□□□ -1.45
HDAC3-216ENST00000523088 ZNF114Q8NC26 417 aa6.01□□□□□ -1.45
HDAC3-216ENST00000523088 OR10G2Q8NGC3 310 aa6.01□□□□□ -1.45
HDAC3-216ENST00000523088 CLDND2Q8NHS1 167 aa6.01□□□□□ -1.45
HDAC3-216ENST00000523088 ZNF837Q96EG3 531 aaPredicted RBP6.01□□□□□ -1.45
HDAC3-216ENST00000523088 EMC6Q9BV81 110 aa6.01□□□□□ -1.45
HDAC3-216ENST00000523088 PRRG4Q9BZD6 226 aa6.01□□□□□ -1.45
HDAC3-216ENST00000523088 OR10A2Q9H208 303 aa6.01□□□□□ -1.45
HDAC3-216ENST00000523088 VSIG4Q9Y279 399 aa6.01□□□□□ -1.45
HDAC3-216ENST00000523088 ARID1AO14497 2285 aa6.01□□□□□ -1.45
HDAC3-216ENST00000523088 ITPR3Q14573 2671 aa6.01□□□□□ -1.45
HDAC3-216ENST00000523088 DSCAMO60469 2012 aa6□□□□□ -1.45
HDAC3-216ENST00000523088 TRAV12-2A0A075B6T6 113 aa6□□□□□ -1.45
HDAC3-216ENST00000523088 TRAV13-1A0A0B4J241 112 aa6□□□□□ -1.45
HDAC3-216ENST00000523088 FAM240AA0A1B0GVK7 77 aa6□□□□□ -1.45
HDAC3-216ENST00000523088 IZUMO1RA6ND01 250 aa6□□□□□ -1.45
HDAC3-216ENST00000523088 C16orf97H3BN30 126 aa6□□□□□ -1.45
HDAC3-216ENST00000523088 P01737 135 aa6□□□□□ -1.45
HDAC3-216ENST00000523088 COX7CP15954 63 aa6□□□□□ -1.45
HDAC3-216ENST00000523088 FKBP2P26885 142 aaKnown RBP6□□□□□ -1.45
HDAC3-216ENST00000523088 TEPPQ6URK8 271 aa6□□□□□ -1.45
HDAC3-216ENST00000523088 C20orf204Q6ZNR8 217 aa6□□□□□ -1.45
HDAC3-216ENST00000523088 Q71RC1 249 aaPredicted RBP6□□□□□ -1.45
HDAC3-216ENST00000523088 CNEP1R1Q8N9A8 125 aa6□□□□□ -1.45
HDAC3-216ENST00000523088 C15orf53Q8NAA6 179 aa6□□□□□ -1.45
HDAC3-216ENST00000523088 SRSF12Q8WXF0 261 aaKnown RBP6□□□□□ -1.45
HDAC3-216ENST00000523088 TMEM147Q9BVK8 224 aa6□□□□□ -1.45
HDAC3-216ENST00000523088 CLEC7AQ9BXN2 247 aa6□□□□□ -1.45
HDAC3-216ENST00000523088 HEATR5AQ86XA9 2040 aa5.99□□□□□ -1.45
HDAC3-216ENST00000523088 TRBV19A0A075B6N1 114 aa5.99□□□□□ -1.45
HDAC3-216ENST00000523088 SMIM26A0A096LP01 95 aa5.99□□□□□ -1.45
HDAC3-216ENST00000523088 NCBP2LA6PVI3 153 aaKnown RBP5.99□□□□□ -1.45
HDAC3-216ENST00000523088 LYRM9A8MSI8 78 aa5.99□□□□□ -1.45
HDAC3-216ENST00000523088 OOSP1A8MZH6 123 aa5.99□□□□□ -1.45
HDAC3-216ENST00000523088 SSSCA1O60232 199 aa5.99□□□□□ -1.45
HDAC3-216ENST00000523088 SS18L1O75177 396 aaPredicted RBP5.99□□□□□ -1.45
HDAC3-216ENST00000523088 HMGN2P05204 90 aaKnown RBP5.99□□□□□ -1.45
HDAC3-216ENST00000523088 IL3RAP26951 378 aa5.99□□□□□ -1.45
HDAC3-216ENST00000523088 UBE2E1P51965 193 aa5.99□□□□□ -1.45
HDAC3-216ENST00000523088 CLDN17P56750 224 aa5.99□□□□□ -1.45
HDAC3-216ENST00000523088 UBE2G1P62253 170 aa5.99□□□□□ -1.45
HDAC3-216ENST00000523088 FOXF2Q12947 444 aa5.99□□□□□ -1.45
HDAC3-216ENST00000523088 ARFRP1Q13795 201 aa5.99□□□□□ -1.45
HDAC3-216ENST00000523088 DEFB113Q30KQ7 82 aa5.99□□□□□ -1.45
HDAC3-216ENST00000523088 KRTAP21-3Q3LHN1 58 aa5.99□□□□□ -1.45
HDAC3-216ENST00000523088 SH2D6Q7Z4S9 175 aa5.99□□□□□ -1.45
HDAC3-216ENST00000523088 MARCH3Q86UD3 253 aa5.99□□□□□ -1.45
HDAC3-216ENST00000523088 SBSPONQ8IVN8 264 aa5.99□□□□□ -1.45
HDAC3-216ENST00000523088 Q8N1Y9 231 aa5.99□□□□□ -1.45
HDAC3-216ENST00000523088 UBE2E2Q96LR5 201 aa5.99□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 85.5 ms