RNA–Protein interactions for RNA: ENST00000522552.5

SKP1-209, Transcript of S-phase kinase associated protein 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SKP1, Length 1,683 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP1-209ENST00000522552 WDR90Q96KV7 1748 aa2.48□□□□□ -2.01
SKP1-209ENST00000522552 ZNF609O15014 1411 aa2.48□□□□□ -2.01
SKP1-209ENST00000522552 ATRXP46100 2492 aa2.47□□□□□ -2.01
SKP1-209ENST00000522552 TRAV30A0A087WSZ9 112 aa2.47□□□□□ -2.01
SKP1-209ENST00000522552 TRAV16A0A0A6YYK6 109 aaPredicted RBP2.47□□□□□ -2.01
SKP1-209ENST00000522552 A0A1B0GVG6 124 aa2.47□□□□□ -2.01
SKP1-209ENST00000522552 SHBGP04278 402 aa2.47□□□□□ -2.01
SKP1-209ENST00000522552 ZNF705BP0CI00 300 aaPredicted RBP2.47□□□□□ -2.01
SKP1-209ENST00000522552 BTG2P78543 158 aa2.47□□□□□ -2.01
SKP1-209ENST00000522552 LINC00483Q53H64 154 aa2.47□□□□□ -2.01
SKP1-209ENST00000522552 KPRPQ5T749 579 aaPredicted RBP2.47□□□□□ -2.01
SKP1-209ENST00000522552 FAM27BQ5VT28 67 aa2.47□□□□□ -2.01
SKP1-209ENST00000522552 IGFL3Q6UXB1 125 aa2.47□□□□□ -2.01
SKP1-209ENST00000522552 FAM216BQ8N7L0 139 aa2.47□□□□□ -2.01
SKP1-209ENST00000522552 MRPL57Q9BQC6 102 aaKnown RBP2.47□□□□□ -2.01
SKP1-209ENST00000522552 SNRNP25Q9BV90 132 aaKnown RBP2.47□□□□□ -2.01
SKP1-209ENST00000522552 RPS10P5Q9NQ39 176 aa2.47□□□□□ -2.01
SKP1-209ENST00000522552 FKBP11Q9NYL4 201 aa2.47□□□□□ -2.01
SKP1-209ENST00000522552 LSM2Q9Y333 95 aaKnown RBP2.47□□□□□ -2.01
SKP1-209ENST00000522552 MPC1Q9Y5U8 109 aa2.47□□□□□ -2.01
SKP1-209ENST00000522552 COL1A1P02452 1464 aaPredicted RBP2.47□□□□□ -2.01
SKP1-209ENST00000522552 TRBV10-2A0A0K0K1G8 114 aa2.47□□□□□ -2.01
SKP1-209ENST00000522552 C7orf66A4D0T2 115 aa2.47□□□□□ -2.01
SKP1-209ENST00000522552 H7C2G1 150 aa2.47□□□□□ -2.01
SKP1-209ENST00000522552 GNRH2O43555 120 aa2.47□□□□□ -2.01
SKP1-209ENST00000522552 SYNGR2O43760 224 aa2.47□□□□□ -2.01
SKP1-209ENST00000522552 CLPSP04118 112 aa2.47□□□□□ -2.01
SKP1-209ENST00000522552 PYYP10082 97 aa2.47□□□□□ -2.01
SKP1-209ENST00000522552 COX6A1P12074 109 aa2.47□□□□□ -2.01
SKP1-209ENST00000522552 FUSP35637 526 aaKnown RBP eCLIP2.47□□□□□ -2.01
SKP1-209ENST00000522552 FXYD2P54710 66 aa2.47□□□□□ -2.01
SKP1-209ENST00000522552 MRPS36P82909 103 aaKnown RBP2.47□□□□□ -2.01
SKP1-209ENST00000522552 CDK6Q00534 326 aa2.47□□□□□ -2.01
SKP1-209ENST00000522552 KRTAP25-1Q3LHN0 102 aa2.47□□□□□ -2.01
SKP1-209ENST00000522552 CLLU1Q5K131 121 aa2.47□□□□□ -2.01
SKP1-209ENST00000522552 AAED1Q7RTV5 226 aa2.47□□□□□ -2.01
SKP1-209ENST00000522552 CHCHD1Q96BP2 118 aaKnown RBP2.47□□□□□ -2.01
SKP1-209ENST00000522552 CACNA1DQ01668 2161 aa2.46□□□□□ -2.02
SKP1-209ENST00000522552 PTPRBP23467 1997 aa2.46□□□□□ -2.02
SKP1-209ENST00000522552 FNDC10F2Z333 226 aa2.46□□□□□ -2.02
SKP1-209ENST00000522552 OR1I1O60431 355 aa2.46□□□□□ -2.02
SKP1-209ENST00000522552 TPT1P13693 172 aaKnown RBP2.46□□□□□ -2.02
SKP1-209ENST00000522552 HIST1H1BP16401 226 aaKnown RBP2.46□□□□□ -2.02
SKP1-209ENST00000522552 ZNF14P17017 642 aaPredicted RBP2.46□□□□□ -2.02
SKP1-209ENST00000522552 MDKP21741 143 aaPredicted RBP2.46□□□□□ -2.02
SKP1-209ENST00000522552 DSCR10P59022 87 aa2.46□□□□□ -2.02
SKP1-209ENST00000522552 RIC1Q4ADV7 1423 aa2.46□□□□□ -2.02
SKP1-209ENST00000522552 FRMPD1Q5SYB0 1578 aa2.46□□□□□ -2.02
SKP1-209ENST00000522552 OR8B2Q96RD0 313 aa2.46□□□□□ -2.02
SKP1-209ENST00000522552 RETNLBQ9BQ08 111 aa2.46□□□□□ -2.02
SKP1-209ENST00000522552 SHANK3Q9BYB0 1731 aa2.46□□□□□ -2.02
SKP1-209ENST00000522552 KRTAP1-5Q9BYS1 174 aa2.46□□□□□ -2.02
SKP1-209ENST00000522552 SLC35B3Q9H1N7 401 aa2.46□□□□□ -2.02
SKP1-209ENST00000522552 DUSP21Q9H596 190 aa2.46□□□□□ -2.02
SKP1-209ENST00000522552 RERGLQ9H628 205 aa2.46□□□□□ -2.02
SKP1-209ENST00000522552 KIAA2026Q5HYC2 2103 aa2.46□□□□□ -2.02
SKP1-209ENST00000522552 NACAE9PAV3 2078 aa2.46□□□□□ -2.02
SKP1-209ENST00000522552 MYH1P12882 1939 aa2.46□□□□□ -2.02
SKP1-209ENST00000522552 PZPP20742 1482 aa2.45□□□□□ -2.02
SKP1-209ENST00000522552 ABCC10Q5T3U5 1492 aa2.45□□□□□ -2.02
SKP1-209ENST00000522552 ZNF737O75373 536 aa2.45□□□□□ -2.02
SKP1-209ENST00000522552 CD3DP04234 171 aa2.45□□□□□ -2.02
SKP1-209ENST00000522552 CD14P08571 375 aa2.45□□□□□ -2.02
SKP1-209ENST00000522552 SLC25A4P12235 298 aa2.45□□□□□ -2.02
SKP1-209ENST00000522552 FABP4P15090 132 aa2.45□□□□□ -2.02
SKP1-209ENST00000522552 TMEM258P61165 79 aa2.45□□□□□ -2.02
SKP1-209ENST00000522552 BLCAPP62952 87 aa2.45□□□□□ -2.02
SKP1-209ENST00000522552 EIF4EBP1Q13541 118 aaPredicted RBP2.45□□□□□ -2.02
SKP1-209ENST00000522552 Q6ZS52 159 aa2.45□□□□□ -2.02
SKP1-209ENST00000522552 GTF2H5Q6ZYL4 71 aa2.45□□□□□ -2.02
SKP1-209ENST00000522552 Q8IYB0 196 aa2.45□□□□□ -2.02
SKP1-209ENST00000522552 CROCCQ5TZA2 2017 aa2.45□□□□□ -2.02
SKP1-209ENST00000522552 MYOM2P54296 1465 aa2.45□□□□□ -2.02
SKP1-209ENST00000522552 TTC37Q6PGP7 1564 aa2.45□□□□□ -2.02
SKP1-209ENST00000522552 RB1CC1Q8TDY2 1594 aa2.45□□□□□ -2.02
SKP1-209ENST00000522552 MYO9BQ13459 2157 aa2.45□□□□□ -2.02
SKP1-209ENST00000522552 ALPK3Q96L96 1907 aa2.45□□□□□ -2.02
SKP1-209ENST00000522552 CUL7Q14999 1698 aa2.45□□□□□ -2.02
SKP1-209ENST00000522552 NISCHQ9Y2I1 1504 aa2.44□□□□□ -2.02
SKP1-209ENST00000522552 TRBV20-1A0A075B6N2 111 aa2.44□□□□□ -2.02
SKP1-209ENST00000522552 PITX3O75364 302 aa2.44□□□□□ -2.02
SKP1-209ENST00000522552 IGKV3-15P01624 115 aa2.44□□□□□ -2.02
SKP1-209ENST00000522552 TPPP2P59282 170 aa2.44□□□□□ -2.02
SKP1-209ENST00000522552 LSM3P62310 102 aaKnown RBP2.44□□□□□ -2.02
SKP1-209ENST00000522552 HSD52Q0P140 79 aa2.44□□□□□ -2.02
SKP1-209ENST00000522552 CATR1Q13166 79 aa2.44□□□□□ -2.02
SKP1-209ENST00000522552 Q6ZQT0 140 aa2.44□□□□□ -2.02
SKP1-209ENST00000522552 KRTAP5-2Q701N4 177 aa2.44□□□□□ -2.02
SKP1-209ENST00000522552 GKN2Q86XP6 184 aa2.44□□□□□ -2.02
SKP1-209ENST00000522552 ATOH7Q8N100 152 aa2.44□□□□□ -2.02
SKP1-209ENST00000522552 Q8N2B8 174 aa2.44□□□□□ -2.02
SKP1-209ENST00000522552 KCNRGQ8N5I3 272 aa2.44□□□□□ -2.02
SKP1-209ENST00000522552 CCL4L1Q8NHW4 92 aa2.44□□□□□ -2.02
SKP1-209ENST00000522552 NHP2Q9NX24 153 aaKnown RBP2.44□□□□□ -2.02
SKP1-209ENST00000522552 ARHGAP32A7KAX9 2087 aa2.44□□□□□ -2.02
SKP1-209ENST00000522552 KIAA1107Q9UPP5 1409 aa2.44□□□□□ -2.02
SKP1-209ENST00000522552 TRAV12-2A0A075B6T6 113 aa2.44□□□□□ -2.02
SKP1-209ENST00000522552 IGHV1-18A0A0C4DH31 117 aa2.44□□□□□ -2.02
SKP1-209ENST00000522552 CD2P06729 351 aa2.44□□□□□ -2.02
SKP1-209ENST00000522552 CCL4P13236 92 aa2.44□□□□□ -2.02
Retrieved 100 of 20,778 RNA–protein pairs in 46.1 ms