RNA–Protein interactions for RNA: ENST00000519895.5

MCF2-208, Transcript of MCF.2 cell line derived transforming sequence, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene MCF2, Length 3,346 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2-208ENST00000519895 E7EUB6 86 aa2.12□□□□□ -2.07
MCF2-208ENST00000519895 K7EQG2 157 aa2.12□□□□□ -2.07
MCF2-208ENST00000519895 ISLRO14498 428 aa2.12□□□□□ -2.07
MCF2-208ENST00000519895 MRPS12O15235 138 aaKnown RBP2.12□□□□□ -2.07
MCF2-208ENST00000519895 DUSP14O95147 198 aaKnown RBP2.12□□□□□ -2.07
MCF2-208ENST00000519895 OR5G3P0C626 314 aa2.12□□□□□ -2.07
MCF2-208ENST00000519895 DEFA4P12838 97 aa2.12□□□□□ -2.07
MCF2-208ENST00000519895 RPL7P18124 248 aaKnown RBP2.12□□□□□ -2.07
MCF2-208ENST00000519895 C4BPBP20851 252 aa2.12□□□□□ -2.07
MCF2-208ENST00000519895 CBLN1P23435 193 aa2.12□□□□□ -2.07
MCF2-208ENST00000519895 NPPCP23582 126 aa2.12□□□□□ -2.07
MCF2-208ENST00000519895 OR10J1P30954 320 aa2.12□□□□□ -2.07
MCF2-208ENST00000519895 DLX1P56177 255 aa2.12□□□□□ -2.07
MCF2-208ENST00000519895 SSTP61278 116 aa2.12□□□□□ -2.07
MCF2-208ENST00000519895 IFITM3Q01628 133 aa2.12□□□□□ -2.07
MCF2-208ENST00000519895 GAGE2BQ13066 116 aa2.12□□□□□ -2.07
MCF2-208ENST00000519895 ZNF266Q14584 549 aa2.12□□□□□ -2.07
MCF2-208ENST00000519895 GAGE2EQ4V326 116 aa2.12□□□□□ -2.07
MCF2-208ENST00000519895 GAGE2AQ6NT46 116 aa2.12□□□□□ -2.07
MCF2-208ENST00000519895 Q6ZNX1 250 aa2.12□□□□□ -2.07
MCF2-208ENST00000519895 STX12Q86Y82 276 aa2.12□□□□□ -2.07
MCF2-208ENST00000519895 PDZD9Q8IXQ8 264 aa2.12□□□□□ -2.07
MCF2-208ENST00000519895 STOML3Q8TAV4 291 aa2.12□□□□□ -2.07
MCF2-208ENST00000519895 DLX4Q92988 240 aaPredicted RBP2.12□□□□□ -2.07
MCF2-208ENST00000519895 RNF183Q96D59 192 aa2.12□□□□□ -2.07
MCF2-208ENST00000519895 GNPNAT1Q96EK6 184 aaPredicted RBP2.12□□□□□ -2.07
MCF2-208ENST00000519895 PBDC1Q9BVG4 233 aa2.12□□□□□ -2.07
MCF2-208ENST00000519895 GAGE2DQ9UEU5 116 aa2.12□□□□□ -2.07
MCF2-208ENST00000519895 RABAC1Q9UI14 185 aa2.12□□□□□ -2.07
MCF2-208ENST00000519895 TRAV1-1A0A0B4J248 108 aa2.11□□□□□ -2.07
MCF2-208ENST00000519895 MEX3AA1L020 520 aaKnown RBP2.11□□□□□ -2.07
MCF2-208ENST00000519895 MEIS3P1A6NDR6 274 aa2.11□□□□□ -2.07
MCF2-208ENST00000519895 BUB3O43684 328 aa2.11□□□□□ -2.07
MCF2-208ENST00000519895 TRIAP1O43715 76 aa2.11□□□□□ -2.07
MCF2-208ENST00000519895 GNG7O60262 68 aa2.11□□□□□ -2.07
MCF2-208ENST00000519895 CXCL1P09341 107 aa2.11□□□□□ -2.07
MCF2-208ENST00000519895 VPREB1P12018 145 aa2.11□□□□□ -2.07
MCF2-208ENST00000519895 TSPOP30536 169 aa2.11□□□□□ -2.07
MCF2-208ENST00000519895 CDKN1BP46527 198 aa2.11□□□□□ -2.07
MCF2-208ENST00000519895 RAB5CP51148 216 aa2.11□□□□□ -2.07
MCF2-208ENST00000519895 APOC4P55056 127 aa2.11□□□□□ -2.07
MCF2-208ENST00000519895 RRAS2P62070 204 aaPredicted RBP2.11□□□□□ -2.07
MCF2-208ENST00000519895 IAH1Q2TAA2 248 aaPredicted RBP2.11□□□□□ -2.07
MCF2-208ENST00000519895 DNLZQ5SXM8 178 aa2.11□□□□□ -2.07
MCF2-208ENST00000519895 FOXI2Q6ZQN5 318 aa2.11□□□□□ -2.07
MCF2-208ENST00000519895 TMEM256Q8N2U0 113 aa2.11□□□□□ -2.07
MCF2-208ENST00000519895 RNASE11Q8TAA1 199 aaKnown RBP2.11□□□□□ -2.07
MCF2-208ENST00000519895 UBALD1Q8TB05 177 aa2.11□□□□□ -2.07
MCF2-208ENST00000519895 SMIM12Q96EX1 92 aa2.11□□□□□ -2.07
MCF2-208ENST00000519895 ATP5SQ99766 215 aa2.11□□□□□ -2.07
MCF2-208ENST00000519895 SPATA25Q9BR10 227 aa2.11□□□□□ -2.07
MCF2-208ENST00000519895 ATG101Q9BSB4 218 aa2.11□□□□□ -2.07
MCF2-208ENST00000519895 C1QTNF4Q9BXJ3 329 aa2.11□□□□□ -2.07
MCF2-208ENST00000519895 FNDC4Q9H6D8 234 aaPredicted RBP2.11□□□□□ -2.07
MCF2-208ENST00000519895 SCRT2Q9NQ03 307 aa2.11□□□□□ -2.07
MCF2-208ENST00000519895 DIRC3C9JPN6 131 aa2.11□□□□□ -2.07
MCF2-208ENST00000519895 TNFSF12O43508 249 aa2.11□□□□□ -2.07
MCF2-208ENST00000519895 OR2J3O76001 311 aa2.11□□□□□ -2.07
MCF2-208ENST00000519895 GALR1P47211 349 aa2.11□□□□□ -2.07
MCF2-208ENST00000519895 PSG9Q00887 426 aa2.11□□□□□ -2.07
MCF2-208ENST00000519895 LCN15Q6UWW0 184 aa2.11□□□□□ -2.07
MCF2-208ENST00000519895 TOMM20LQ6UXN7 152 aa2.11□□□□□ -2.07
MCF2-208ENST00000519895 NRARPQ7Z6K4 114 aa2.11□□□□□ -2.07
MCF2-208ENST00000519895 TMEM252Q8N6L7 170 aa2.11□□□□□ -2.07
MCF2-208ENST00000519895 LRRC20Q8TCA0 184 aa2.11□□□□□ -2.07
MCF2-208ENST00000519895 PHYHIPLQ96FC7 376 aa2.11□□□□□ -2.07
MCF2-208ENST00000519895 GGTLC1Q9BX51 225 aa2.11□□□□□ -2.07
MCF2-208ENST00000519895 TNFRSF19Q9NS68 423 aa2.11□□□□□ -2.07
MCF2-208ENST00000519895 NUDT15Q9NV35 164 aa2.11□□□□□ -2.07
MCF2-208ENST00000519895 UQCC1Q9NVA1 299 aa2.11□□□□□ -2.07
MCF2-208ENST00000519895 STARD9Q9P2P6 4700 aa2.11□□□□□ -2.07
MCF2-208ENST00000519895 EPM2AB3EWF7 344 aa2.11□□□□□ -2.07
MCF2-208ENST00000519895 UMAD1C9J7I0 102 aa2.11□□□□□ -2.07
MCF2-208ENST00000519895 MPC2O95563 127 aa2.11□□□□□ -2.07
MCF2-208ENST00000519895 S100A6P06703 90 aa2.11□□□□□ -2.07
MCF2-208ENST00000519895 RD3LP0DJH9 198 aa2.11□□□□□ -2.07
MCF2-208ENST00000519895 FOLR2P14207 255 aa2.11□□□□□ -2.07
MCF2-208ENST00000519895 CD164L2Q6UWJ8 174 aa2.11□□□□□ -2.07
MCF2-208ENST00000519895 GTSCR1Q86UQ5 136 aa2.11□□□□□ -2.07
MCF2-208ENST00000519895 STHQ8IWL8 128 aa2.11□□□□□ -2.07
MCF2-208ENST00000519895 OR5T1Q8NG75 326 aa2.11□□□□□ -2.07
MCF2-208ENST00000519895 DCANP1Q8TF63 244 aa2.11□□□□□ -2.07
MCF2-208ENST00000519895 FAM19A4Q96LR4 140 aa2.11□□□□□ -2.07
MCF2-208ENST00000519895 RNF126Q9BV68 326 aa2.11□□□□□ -2.07
MCF2-208ENST00000519895 TNFSF18Q9UNG2 199 aa2.11□□□□□ -2.07
MCF2-208ENST00000519895 ZNF705EA8MWA4 302 aaPredicted RBP2.1□□□□□ -2.07
MCF2-208ENST00000519895 HYPMO75409 117 aa2.1□□□□□ -2.07
MCF2-208ENST00000519895 IFNA10P01566 189 aa2.1□□□□□ -2.07
MCF2-208ENST00000519895 SEC11BP0C7V7 166 aa2.1□□□□□ -2.07
MCF2-208ENST00000519895 LINC00869P0C866 280 aa2.1□□□□□ -2.07
MCF2-208ENST00000519895 CD24P25063 80 aa2.1□□□□□ -2.07
MCF2-208ENST00000519895 TAS2R45P59539 299 aa2.1□□□□□ -2.07
MCF2-208ENST00000519895 SLC38A11Q08AI6 406 aa2.1□□□□□ -2.07
MCF2-208ENST00000519895 Q56UQ5 140 aa2.1□□□□□ -2.07
MCF2-208ENST00000519895 PQLC2Q6ZP29 291 aa2.1□□□□□ -2.07
MCF2-208ENST00000519895 KCNRGQ8N5I3 272 aa2.1□□□□□ -2.07
MCF2-208ENST00000519895 RPUSD4Q96CM3 377 aaKnown RBP2.1□□□□□ -2.07
MCF2-208ENST00000519895 CYYR1Q96J86 154 aa2.1□□□□□ -2.07
MCF2-208ENST00000519895 WDR61Q9GZS3 305 aaKnown RBP2.1□□□□□ -2.07
MCF2-208ENST00000519895 MED28Q9H204 178 aa2.1□□□□□ -2.07
Retrieved 100 of 20,778 RNA–protein pairs in 123 ms