RNA–Protein interactions for RNA: ENST00000519479.1

PCDHGB4-201, Transcript of protocadherin gamma subfamily B, 4, humanhuman

TSL 1 (best) BASIC

Gene PCDHGB4, Length 4,578 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGB4-201ENST00000519479 LOC107984156A0A0G2JMH3 177 aa9.04□□□□□ -0.96
PCDHGB4-201ENST00000519479 HAX1O00165 279 aa9.04□□□□□ -0.96
PCDHGB4-201ENST00000519479 SMAD7O15105 426 aaKnown RBP9.04□□□□□ -0.96
PCDHGB4-201ENST00000519479 SSBP2P81877 361 aaPredicted RBP9.04□□□□□ -0.96
PCDHGB4-201ENST00000519479 UBE2V1Q13404 147 aa9.04□□□□□ -0.96
PCDHGB4-201ENST00000519479 UTF1Q5T230 341 aa9.04□□□□□ -0.96
PCDHGB4-201ENST00000519479 ARL17AQ8IVW1 177 aa9.04□□□□□ -0.96
PCDHGB4-201ENST00000519479 V9GYV3 84 aa9.04□□□□□ -0.96
PCDHGB4-201ENST00000519479 GRNP28799 593 aaKnown RBP9.04□□□□□ -0.96
PCDHGB4-201ENST00000519479 CR1LQ2VPA4 569 aa9.04□□□□□ -0.96
PCDHGB4-201ENST00000519479 CEP295Q9C0D2 2601 aa9.03□□□□□ -0.96
PCDHGB4-201ENST00000519479 RPL15P61313 204 aaKnown RBP9.03□□□□□ -0.96
PCDHGB4-201ENST00000519479 C15orf32Q32M92 178 aa9.03□□□□□ -0.96
PCDHGB4-201ENST00000519479 MYOZ3Q8TDC0 251 aa9.03□□□□□ -0.96
PCDHGB4-201ENST00000519479 LINC00527Q9UJ94 153 aa9.03□□□□□ -0.96
PCDHGB4-201ENST00000519479 TRAV9-2A0A087WT02 112 aa9.03□□□□□ -0.96
PCDHGB4-201ENST00000519479 H3BUT2 72 aa9.03□□□□□ -0.96
PCDHGB4-201ENST00000519479 M0R3E3 92 aa9.03□□□□□ -0.96
PCDHGB4-201ENST00000519479 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa9.03□□□□□ -0.96
PCDHGB4-201ENST00000519479 FER1L6-AS1Q8NA97 138 aa9.03□□□□□ -0.96
PCDHGB4-201ENST00000519479 C7orf69Q9H7B7 122 aa9.03□□□□□ -0.96
PCDHGB4-201ENST00000519479 MINOS1Q5TGZ0 78 aa9.03□□□□□ -0.96
PCDHGB4-201ENST00000519479 C22orf34Q6ZV56 151 aa9.03□□□□□ -0.96
PCDHGB4-201ENST00000519479 MINOS1-NBL1R4GNA1 71 aa9.03□□□□□ -0.96
PCDHGB4-201ENST00000519479 A0A1B0GW15 77 aa9.02□□□□□ -0.96
PCDHGB4-201ENST00000519479 OOSP1A8MZH6 123 aa9.02□□□□□ -0.96
PCDHGB4-201ENST00000519479 K7EN84 100 aa9.02□□□□□ -0.96
PCDHGB4-201ENST00000519479 HTN1P15515 57 aa9.02□□□□□ -0.96
PCDHGB4-201ENST00000519479 ID1P41134 155 aa9.02□□□□□ -0.96
PCDHGB4-201ENST00000519479 YPEL3P61236 119 aaPredicted RBP9.02□□□□□ -0.96
PCDHGB4-201ENST00000519479 ASPHD1Q5U4P2 390 aa9.02□□□□□ -0.96
PCDHGB4-201ENST00000519479 AMMECR1LQ6DCA0 310 aa9.02□□□□□ -0.96
PCDHGB4-201ENST00000519479 RASL11AQ6T310 242 aa9.02□□□□□ -0.96
PCDHGB4-201ENST00000519479 Q8NA96 180 aa9.02□□□□□ -0.96
PCDHGB4-201ENST00000519479 PYGO2Q9BRQ0 406 aa9.02□□□□□ -0.96
PCDHGB4-201ENST00000519479 MYO18BQ8IUG5 2567 aa9.02□□□□□ -0.96
PCDHGB4-201ENST00000519479 TOMM40O96008 361 aa9.02□□□□□ -0.97
PCDHGB4-201ENST00000519479 IGKV2-40A0A087WW87 121 aaPredicted RBP9.02□□□□□ -0.97
PCDHGB4-201ENST00000519479 IGKV2D-40P01614 121 aaPredicted RBP9.02□□□□□ -0.97
PCDHGB4-201ENST00000519479 IGHV3-11P01762 117 aa9.02□□□□□ -0.97
PCDHGB4-201ENST00000519479 SMIM13P0DJ93 91 aa9.02□□□□□ -0.97
PCDHGB4-201ENST00000519479 ASCL2Q99929 193 aa9.02□□□□□ -0.97
PCDHGB4-201ENST00000519479 NPIPB5A8MRT5 1133 aa9.02□□□□□ -0.97
PCDHGB4-201ENST00000519479 GPX1P07203 203 aa9.02□□□□□ -0.97
PCDHGB4-201ENST00000519479 ORMDL3Q8N138 153 aa9.02□□□□□ -0.97
PCDHGB4-201ENST00000519479 MRPL52Q86TS9 123 aaKnown RBP9.01□□□□□ -0.97
PCDHGB4-201ENST00000519479 TMEM219Q86XT9 240 aa9.01□□□□□ -0.97
PCDHGB4-201ENST00000519479 ZNF418Q8TF45 676 aaPredicted RBP9.01□□□□□ -0.97
PCDHGB4-201ENST00000519479 FREM2Q5SZK8 3169 aa9.01□□□□□ -0.97
PCDHGB4-201ENST00000519479 IGLC7A0M8Q6 106 aa9.01□□□□□ -0.97
PCDHGB4-201ENST00000519479 FABP5P3A8MUU1 101 aa9.01□□□□□ -0.97
PCDHGB4-201ENST00000519479 CGB3P0DN86 165 aa9.01□□□□□ -0.97
PCDHGB4-201ENST00000519479 CGB7P0DN87 165 aa9.01□□□□□ -0.97
PCDHGB4-201ENST00000519479 HIST1H1AQ02539 215 aaPredicted RBP9.01□□□□□ -0.97
PCDHGB4-201ENST00000519479 FAM106AQ4KMX7 169 aa9.01□□□□□ -0.97
PCDHGB4-201ENST00000519479 SP5Q6BEB4 398 aaPredicted RBP9.01□□□□□ -0.97
PCDHGB4-201ENST00000519479 CDPF1Q6NVV7 123 aa9.01□□□□□ -0.97
PCDHGB4-201ENST00000519479 ORAOV1Q8WV07 137 aa9.01□□□□□ -0.97
PCDHGB4-201ENST00000519479 PHLDA3Q9Y5J5 127 aa9.01□□□□□ -0.97
PCDHGB4-201ENST00000519479 TRBV20OR9-2A0A075B6H5 130 aa9.01□□□□□ -0.97
PCDHGB4-201ENST00000519479 SMAGPQ0VAQ4 97 aa9.01□□□□□ -0.97
PCDHGB4-201ENST00000519479 ZNF562Q6V9R5 426 aa9.01□□□□□ -0.97
PCDHGB4-201ENST00000519479 SRSF8Q9BRL6 282 aaKnown RBP9.01□□□□□ -0.97
PCDHGB4-201ENST00000519479 SHANK2-AS3Q9BTD1 123 aa9.01□□□□□ -0.97
PCDHGB4-201ENST00000519479 EIF4EBP1Q13541 118 aaPredicted RBP9□□□□□ -0.97
PCDHGB4-201ENST00000519479 DGAT2L7PQ6IED9 249 aa9□□□□□ -0.97
PCDHGB4-201ENST00000519479 JKAMPQ9P055 326 aa9□□□□□ -0.97
PCDHGB4-201ENST00000519479 TRAV40A0A0B4J280 105 aa9□□□□□ -0.97
PCDHGB4-201ENST00000519479 Q0VG73 95 aa9□□□□□ -0.97
PCDHGB4-201ENST00000519479 TTC32Q5I0X7 151 aa9□□□□□ -0.97
PCDHGB4-201ENST00000519479 LCN12Q6JVE5 192 aa9□□□□□ -0.97
PCDHGB4-201ENST00000519479 ZNF841Q6ZN19 808 aa9□□□□□ -0.97
PCDHGB4-201ENST00000519479 C8orf31Q8N9H6 132 aa9□□□□□ -0.97
PCDHGB4-201ENST00000519479 FXYD5Q96DB9 178 aa9□□□□□ -0.97
PCDHGB4-201ENST00000519479 C18orf15Q96N68 181 aa9□□□□□ -0.97
PCDHGB4-201ENST00000519479 BPESC1Q9GZL8 116 aa9□□□□□ -0.97
PCDHGB4-201ENST00000519479 IGKV1OR2-108A0A075B7D4 117 aa9□□□□□ -0.97
PCDHGB4-201ENST00000519479 C22orf46C9J442 243 aa9□□□□□ -0.97
PCDHGB4-201ENST00000519479 FBXL19-AS1Q494R0 122 aa9□□□□□ -0.97
PCDHGB4-201ENST00000519479 Q86TA4 180 aa9□□□□□ -0.97
PCDHGB4-201ENST00000519479 THAP8Q8NA92 274 aa9□□□□□ -0.97
PCDHGB4-201ENST00000519479 POLR3KQ9Y2Y1 108 aaPredicted RBP9□□□□□ -0.97
PCDHGB4-201ENST00000519479 C3orf79P0CE67 100 aa9□□□□□ -0.97
PCDHGB4-201ENST00000519479 RITA1Q96K30 269 aa9□□□□□ -0.97
PCDHGB4-201ENST00000519479 HIST1H4GQ99525 98 aa9□□□□□ -0.97
PCDHGB4-201ENST00000519479 CHD3Q12873 2000 aaKnown RBP8.99□□□□□ -0.97
PCDHGB4-201ENST00000519479 KMT2EQ8IZD2 1858 aa8.99□□□□□ -0.97
PCDHGB4-201ENST00000519479 PPIFP30405 207 aaKnown RBP8.99□□□□□ -0.97
PCDHGB4-201ENST00000519479 MORN5Q5VZ52 161 aa8.99□□□□□ -0.97
PCDHGB4-201ENST00000519479 IGFL4Q6B9Z1 124 aa8.99□□□□□ -0.97
PCDHGB4-201ENST00000519479 C1orf229Q6ZS94 237 aaPredicted RBP8.99□□□□□ -0.97
PCDHGB4-201ENST00000519479 SIGMAR1Q99720 223 aa8.99□□□□□ -0.97
PCDHGB4-201ENST00000519479 SELENOKQ9Y6D0 94 aa8.99□□□□□ -0.97
PCDHGB4-201ENST00000519479 A0A1B0GWB2 263 aa8.99□□□□□ -0.97
PCDHGB4-201ENST00000519479 Q8TAT8 98 aa8.99□□□□□ -0.97
PCDHGB4-201ENST00000519479 SLC50A1Q9BRV3 221 aa8.99□□□□□ -0.97
PCDHGB4-201ENST00000519479 C7orf71A4D174 169 aa8.99□□□□□ -0.97
PCDHGB4-201ENST00000519479 SNCGO76070 127 aa8.99□□□□□ -0.97
PCDHGB4-201ENST00000519479 IGLC1P0CG04 106 aa8.99□□□□□ -0.97
PCDHGB4-201ENST00000519479 PSG3Q16557 428 aa8.99□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 49.6 ms