RNA–Protein interactions for RNA: ENST00000516080.1

RNU4-49P-201, Transcript of RNA, U4 small nuclear 49, pseudogene, humanhuman

BASIC

Gene RNU4-49P, Length 140 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-49P-201ENST00000516080 CSMD3Q7Z407 3707 aa-0.41□□□□□ -2.48
RNU4-49P-201ENST00000516080 COL4A6Q14031 1691 aa-0.41□□□□□ -2.48
RNU4-49P-201ENST00000516080 ZNF236Q9UL36 1845 aa-0.41□□□□□ -2.48
RNU4-49P-201ENST00000516080 BICRAQ9NZM4 1560 aa-0.41□□□□□ -2.48
RNU4-49P-201ENST00000516080 DSPPQ9NZW4 1301 aa-0.41□□□□□ -2.48
RNU4-49P-201ENST00000516080 SPTA1P02549 2419 aa-0.42□□□□□ -2.48
RNU4-49P-201ENST00000516080 FAT2Q9NYQ8 4349 aa-0.42□□□□□ -2.48
RNU4-49P-201ENST00000516080 PAPPAQ13219 1627 aa-0.42□□□□□ -2.48
RNU4-49P-201ENST00000516080 DNAJC13O75165 2243 aa-0.42□□□□□ -2.48
RNU4-49P-201ENST00000516080 TRGV10A0A0A0MS01 117 aa-0.42□□□□□ -2.48
RNU4-49P-201ENST00000516080 A0A0A6YYH2 397 aa-0.42□□□□□ -2.48
RNU4-49P-201ENST00000516080 TRAV17A0A0B4J275 112 aa-0.42□□□□□ -2.48
RNU4-49P-201ENST00000516080 EXOC1LA0A1B0GW35 172 aa-0.42□□□□□ -2.48
RNU4-49P-201ENST00000516080 C9orf170A2RU37 121 aa-0.42□□□□□ -2.48
RNU4-49P-201ENST00000516080 A6NJ64 397 aa-0.42□□□□□ -2.48
RNU4-49P-201ENST00000516080 ZNF815PA8K554 130 aa-0.42□□□□□ -2.48
RNU4-49P-201ENST00000516080 BBIP1A8MTZ0 92 aa-0.42□□□□□ -2.48
RNU4-49P-201ENST00000516080 HIGD1CA8MV81 97 aa-0.42□□□□□ -2.48
RNU4-49P-201ENST00000516080 A8MWV9 139 aa-0.42□□□□□ -2.48
RNU4-49P-201ENST00000516080 J3QRK9 145 aa-0.42□□□□□ -2.48
RNU4-49P-201ENST00000516080 CCRL2O00421 344 aa-0.42□□□□□ -2.48
RNU4-49P-201ENST00000516080 TGOLN2O43493 480 aa-0.42□□□□□ -2.48
RNU4-49P-201ENST00000516080 NDUFB3O43676 98 aa-0.42□□□□□ -2.48
RNU4-49P-201ENST00000516080 APOC1P02654 83 aa-0.42□□□□□ -2.48
RNU4-49P-201ENST00000516080 GYPBP06028 91 aa-0.42□□□□□ -2.48
RNU4-49P-201ENST00000516080 IVLP07476 585 aa-0.42□□□□□ -2.48
RNU4-49P-201ENST00000516080 SPINK8P0C7L1 97 aa-0.42□□□□□ -2.48
RNU4-49P-201ENST00000516080 PET100P0DJ07 73 aa-0.42□□□□□ -2.48
RNU4-49P-201ENST00000516080 GCHFRP30047 84 aa-0.42□□□□□ -2.48
RNU4-49P-201ENST00000516080 S100A3P33764 101 aa-0.42□□□□□ -2.48
RNU4-49P-201ENST00000516080 MARCKSL1P49006 195 aa-0.42□□□□□ -2.48
RNU4-49P-201ENST00000516080 RAB5CP51148 216 aa-0.42□□□□□ -2.48
RNU4-49P-201ENST00000516080 OR10A3P58181 314 aa-0.42□□□□□ -2.48
RNU4-49P-201ENST00000516080 CXCR4P61073 352 aa-0.42□□□□□ -2.48
RNU4-49P-201ENST00000516080 TNNC1P63316 161 aa-0.42□□□□□ -2.48
RNU4-49P-201ENST00000516080 AESQ08117 197 aa-0.42□□□□□ -2.48
RNU4-49P-201ENST00000516080 TMED1Q13445 227 aa-0.42□□□□□ -2.48
RNU4-49P-201ENST00000516080 KRR1Q13601 381 aaKnown RBP-0.42□□□□□ -2.48
RNU4-49P-201ENST00000516080 GUK1Q16774 197 aa-0.42□□□□□ -2.48
RNU4-49P-201ENST00000516080 RBM48Q5RL73 367 aaKnown RBP-0.42□□□□□ -2.48
RNU4-49P-201ENST00000516080 BCL2L15Q5TBC7 163 aa-0.42□□□□□ -2.48
RNU4-49P-201ENST00000516080 LYRM7Q5U5X0 104 aa-0.42□□□□□ -2.48
RNU4-49P-201ENST00000516080 SPOPLQ6IQ16 392 aa-0.42□□□□□ -2.48
RNU4-49P-201ENST00000516080 EIF5AL1Q6IS14 154 aaKnown RBP-0.42□□□□□ -2.48
RNU4-49P-201ENST00000516080 SSBP3-AS1Q7Z2R9 100 aa-0.42□□□□□ -2.48
RNU4-49P-201ENST00000516080 ARPINQ7Z6K5 226 aa-0.42□□□□□ -2.48
RNU4-49P-201ENST00000516080 IFT20Q8IY31 132 aa-0.42□□□□□ -2.48
RNU4-49P-201ENST00000516080 BLIDQ8IZY5 108 aa-0.42□□□□□ -2.48
RNU4-49P-201ENST00000516080 LRRC25Q8N386 305 aaPredicted RBP-0.42□□□□□ -2.48
RNU4-49P-201ENST00000516080 C5orf56Q8N8D9 126 aa-0.42□□□□□ -2.48
RNU4-49P-201ENST00000516080 OR5D16Q8NGK9 328 aa-0.42□□□□□ -2.48
RNU4-49P-201ENST00000516080 OR10K1Q8NGX5 313 aa-0.42□□□□□ -2.48
RNU4-49P-201ENST00000516080 OR4K15Q8NH41 348 aa-0.42□□□□□ -2.48
RNU4-49P-201ENST00000516080 EEF1AKMT1Q8WVE0 214 aa-0.42□□□□□ -2.48
RNU4-49P-201ENST00000516080 TOMM6Q96B49 74 aa-0.42□□□□□ -2.48
RNU4-49P-201ENST00000516080 CCDC124Q96CT7 223 aaKnown RBP-0.42□□□□□ -2.48
RNU4-49P-201ENST00000516080 TMEM141Q96I45 108 aa-0.42□□□□□ -2.48
RNU4-49P-201ENST00000516080 HYLS1Q96M11 299 aa-0.42□□□□□ -2.48
RNU4-49P-201ENST00000516080 FAM210AQ96ND0 272 aa-0.42□□□□□ -2.48
RNU4-49P-201ENST00000516080 OR52E6Q96RD3 313 aa-0.42□□□□□ -2.48
RNU4-49P-201ENST00000516080 UPF3BQ9BZI7 483 aaKnown RBP-0.42□□□□□ -2.48
RNU4-49P-201ENST00000516080 DERL2Q9GZP9 239 aa-0.42□□□□□ -2.48
RNU4-49P-201ENST00000516080 CCDC90BQ9GZT6 254 aa-0.42□□□□□ -2.48
RNU4-49P-201ENST00000516080 ASCL3Q9NQ33 180 aa-0.42□□□□□ -2.48
RNU4-49P-201ENST00000516080 PRTFDC1Q9NRG1 225 aa-0.42□□□□□ -2.48
RNU4-49P-201ENST00000516080 EURLQ9NYK6 297 aa-0.42□□□□□ -2.48
RNU4-49P-201ENST00000516080 UBAP1Q9NZ09 502 aa-0.42□□□□□ -2.48
RNU4-49P-201ENST00000516080 NXT1Q9UKK6 140 aaKnown RBP-0.42□□□□□ -2.48
RNU4-49P-201ENST00000516080 URB1O60287 2271 aaKnown RBP-0.42□□□□□ -2.48
RNU4-49P-201ENST00000516080 SPTBN4Q9H254 2564 aa-0.42□□□□□ -2.48
RNU4-49P-201ENST00000516080 SSC5DA1L4H1 1573 aa-0.42□□□□□ -2.48
RNU4-49P-201ENST00000516080 ERCC6L2Q5T890 1561 aa-0.42□□□□□ -2.48
RNU4-49P-201ENST00000516080 NCAPD3P42695 1498 aa-0.42□□□□□ -2.48
RNU4-49P-201ENST00000516080 TRPM1Q7Z4N2 1603 aa-0.42□□□□□ -2.48
RNU4-49P-201ENST00000516080 UBR4Q5T4S7 5183 aa-0.42□□□□□ -2.48
RNU4-49P-201ENST00000516080 MUC22E2RYF6 1773 aaPredicted RBP-0.42□□□□□ -2.48
RNU4-49P-201ENST00000516080 PAPPA2Q9BXP8 1791 aa-0.42□□□□□ -2.48
RNU4-49P-201ENST00000516080 NIPBLQ6KC79 2804 aaeCLIP-0.42□□□□□ -2.48
RNU4-49P-201ENST00000516080 NBASA2RRP1 2371 aa-0.43□□□□□ -2.48
RNU4-49P-201ENST00000516080 BLMP54132 1417 aaPredicted RBP-0.43□□□□□ -2.48
RNU4-49P-201ENST00000516080 C10orf71Q711Q0 1435 aa-0.43□□□□□ -2.48
RNU4-49P-201ENST00000516080 TRAV27A0A087WT01 109 aa-0.43□□□□□ -2.48
RNU4-49P-201ENST00000516080 A0A096LNT2 108 aa-0.43□□□□□ -2.48
RNU4-49P-201ENST00000516080 A0A0J9YY99 117 aa-0.43□□□□□ -2.48
RNU4-49P-201ENST00000516080 GOLGA6L7A0A1B0GV03 622 aa-0.43□□□□□ -2.48
RNU4-49P-201ENST00000516080 LOC101927531A0A1B0GV80 90 aa-0.43□□□□□ -2.48
RNU4-49P-201ENST00000516080 hDV103S1A0JD37 113 aa-0.43□□□□□ -2.48
RNU4-49P-201ENST00000516080 H0Y980 276 aa-0.43□□□□□ -2.48
RNU4-49P-201ENST00000516080 BUB1B-PAK6H3BSN5 160 aa-0.43□□□□□ -2.48
RNU4-49P-201ENST00000516080 NPFFO15130 113 aa-0.43□□□□□ -2.48
RNU4-49P-201ENST00000516080 SPINK4O60575 86 aa-0.43□□□□□ -2.48
RNU4-49P-201ENST00000516080 CST8O60676 142 aa-0.43□□□□□ -2.48
RNU4-49P-201ENST00000516080 ADAP1O75689 374 aa-0.43□□□□□ -2.48
RNU4-49P-201ENST00000516080 IGLV1-51P01701 117 aa-0.43□□□□□ -2.48
RNU4-49P-201ENST00000516080 HLA-DRB1P01911 266 aa-0.43□□□□□ -2.48
RNU4-49P-201ENST00000516080 COX4I1P13073 169 aa-0.43□□□□□ -2.48
RNU4-49P-201ENST00000516080 PTNP21246 168 aa-0.43□□□□□ -2.48
RNU4-49P-201ENST00000516080 CCL1P22362 96 aa-0.43□□□□□ -2.48
RNU4-49P-201ENST00000516080 SDC4P31431 198 aa-0.43□□□□□ -2.48
RNU4-49P-201ENST00000516080 GLRXP35754 106 aa-0.43□□□□□ -2.48
Retrieved 100 of 20,778 RNA–protein pairs in 70.5 ms