RNA–Protein interactions for RNA: ENST00000511281.1

HMGB1P47-201, Transcript of high mobility group box 1 pseudogene 47, humanhuman

BASIC

Gene HMGB1P47, Length 589 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P47-201ENST00000511281 SMIM5Q71RC9 77 aa2.14□□□□□ -2.07
HMGB1P47-201ENST00000511281 STAG3L4Q8TBR4 150 aa2.14□□□□□ -2.07
HMGB1P47-201ENST00000511281 CANT1Q8WVQ1 401 aa2.14□□□□□ -2.07
HMGB1P47-201ENST00000511281 AQP3Q92482 292 aa2.14□□□□□ -2.07
HMGB1P47-201ENST00000511281 YPEL2Q96QA6 119 aa2.14□□□□□ -2.07
HMGB1P47-201ENST00000511281 TMEM70Q9BUB7 260 aa2.14□□□□□ -2.07
HMGB1P47-201ENST00000511281 MED29Q9NX70 200 aa2.14□□□□□ -2.07
HMGB1P47-201ENST00000511281 SSR3Q9UNL2 185 aa2.14□□□□□ -2.07
HMGB1P47-201ENST00000511281 NHSQ6T4R5 1651 aa2.14□□□□□ -2.07
HMGB1P47-201ENST00000511281 MON2Q7Z3U7 1717 aa2.14□□□□□ -2.07
HMGB1P47-201ENST00000511281 SBF1O95248 1867 aa2.14□□□□□ -2.07
HMGB1P47-201ENST00000511281 RP1P56715 2156 aa2.13□□□□□ -2.07
HMGB1P47-201ENST00000511281 IBTKQ9P2D0 1353 aaPredicted RBP2.13□□□□□ -2.07
HMGB1P47-201ENST00000511281 FAM208AQ9UK61 1670 aaKnown RBP2.13□□□□□ -2.07
HMGB1P47-201ENST00000511281 PPP5D1E7EU14 171 aa2.13□□□□□ -2.07
HMGB1P47-201ENST00000511281 M0R378 163 aa2.13□□□□□ -2.07
HMGB1P47-201ENST00000511281 TAX1BP3O14907 124 aa2.13□□□□□ -2.07
HMGB1P47-201ENST00000511281 SRP14P37108 136 aaKnown RBP2.13□□□□□ -2.07
HMGB1P47-201ENST00000511281 TRIQKQ629K1 86 aa2.13□□□□□ -2.07
HMGB1P47-201ENST00000511281 C22orf39Q6P5X5 142 aa2.13□□□□□ -2.07
HMGB1P47-201ENST00000511281 C3orf56Q8N813 242 aa2.13□□□□□ -2.07
HMGB1P47-201ENST00000511281 NUP35Q8NFH5 326 aa2.13□□□□□ -2.07
HMGB1P47-201ENST00000511281 MALSU1Q96EH3 234 aa2.13□□□□□ -2.07
HMGB1P47-201ENST00000511281 ZNF625Q96I27 306 aaPredicted RBP2.13□□□□□ -2.07
HMGB1P47-201ENST00000511281 TEX37Q96LM6 180 aa2.13□□□□□ -2.07
HMGB1P47-201ENST00000511281 SS18L2Q9UHA2 77 aa2.13□□□□□ -2.07
HMGB1P47-201ENST00000511281 V9GYQ6 96 aa2.13□□□□□ -2.07
HMGB1P47-201ENST00000511281 BAZ2BQ9UIF8 2168 aaKnown RBP2.13□□□□□ -2.07
HMGB1P47-201ENST00000511281 LTN1O94822 1766 aa2.13□□□□□ -2.07
HMGB1P47-201ENST00000511281 BTAF1O14981 1849 aa2.12□□□□□ -2.07
HMGB1P47-201ENST00000511281 USP54Q70EL1 1684 aa2.12□□□□□ -2.07
HMGB1P47-201ENST00000511281 DOT1LQ8TEK3 1739 aa2.12□□□□□ -2.07
HMGB1P47-201ENST00000511281 KDM6AO15550 1401 aaPredicted RBP2.12□□□□□ -2.07
HMGB1P47-201ENST00000511281 DUXBA0A1W2PPF3 345 aa2.12□□□□□ -2.07
HMGB1P47-201ENST00000511281 GGCTO75223 188 aaKnown RBP2.12□□□□□ -2.07
HMGB1P47-201ENST00000511281 C3orf33Q6P1S2 294 aa2.12□□□□□ -2.07
HMGB1P47-201ENST00000511281 FP248Q71RG6 208 aaPredicted RBP2.12□□□□□ -2.07
HMGB1P47-201ENST00000511281 Q96M85 177 aa2.12□□□□□ -2.07
HMGB1P47-201ENST00000511281 TRABDQ9H4I3 376 aa2.12□□□□□ -2.07
HMGB1P47-201ENST00000511281 HS3ST2Q9Y278 367 aa2.12□□□□□ -2.07
HMGB1P47-201ENST00000511281 MYH7BA7E2Y1 1941 aa2.11□□□□□ -2.07
HMGB1P47-201ENST00000511281 RGPD2P0DJD1 1756 aa2.11□□□□□ -2.07
HMGB1P47-201ENST00000511281 TRGV10A0A0A0MS01 117 aa2.11□□□□□ -2.07
HMGB1P47-201ENST00000511281 PHF13Q86YI8 300 aaPredicted RBP2.11□□□□□ -2.07
HMGB1P47-201ENST00000511281 STX19Q8N4C7 294 aa2.11□□□□□ -2.07
HMGB1P47-201ENST00000511281 PLEKHB2Q96CS7 222 aa2.11□□□□□ -2.07
HMGB1P47-201ENST00000511281 ZHX1-C8orf76Q96EF9 292 aa2.11□□□□□ -2.07
HMGB1P47-201ENST00000511281 PCBD2Q9H0N5 130 aa2.11□□□□□ -2.07
HMGB1P47-201ENST00000511281 CYSTM1Q9H1C7 97 aa2.11□□□□□ -2.07
HMGB1P47-201ENST00000511281 ATPIF1Q9UII2 106 aa2.11□□□□□ -2.07
HMGB1P47-201ENST00000511281 COL11A1P12107 1806 aaPredicted RBP2.11□□□□□ -2.07
HMGB1P47-201ENST00000511281 SDK1Q7Z5N4 2213 aa2.11□□□□□ -2.07
HMGB1P47-201ENST00000511281 OBSL1O75147 1896 aa2.11□□□□□ -2.07
HMGB1P47-201ENST00000511281 LY75O60449 1722 aa2.11□□□□□ -2.07
HMGB1P47-201ENST00000511281 COL24A1Q17RW2 1714 aa2.11□□□□□ -2.07
HMGB1P47-201ENST00000511281 TOGARAM1Q9Y4F4 1720 aa2.11□□□□□ -2.07
HMGB1P47-201ENST00000511281 SORL1Q92673 2214 aa2.1□□□□□ -2.07
HMGB1P47-201ENST00000511281 CR1P17927 2039 aa2.1□□□□□ -2.07
HMGB1P47-201ENST00000511281 C5P01031 1676 aa2.1□□□□□ -2.07
HMGB1P47-201ENST00000511281 TRGV2A0A075B6R0 118 aa2.1□□□□□ -2.07
HMGB1P47-201ENST00000511281 RIIAD1A6NNX1 92 aa2.1□□□□□ -2.07
HMGB1P47-201ENST00000511281 PGRMC1O00264 195 aaKnown RBP2.1□□□□□ -2.07
HMGB1P47-201ENST00000511281 UBBP0CG47 229 aa2.1□□□□□ -2.07
HMGB1P47-201ENST00000511281 SERPINB1P30740 379 aa2.1□□□□□ -2.07
HMGB1P47-201ENST00000511281 BCL2L15Q5TBC7 163 aa2.1□□□□□ -2.07
HMGB1P47-201ENST00000511281 LINC00471Q8N535 108 aa2.1□□□□□ -2.07
HMGB1P47-201ENST00000511281 OR10J5Q8NHC4 309 aa2.1□□□□□ -2.07
HMGB1P47-201ENST00000511281 SLC50A1Q9BRV3 221 aa2.1□□□□□ -2.07
HMGB1P47-201ENST00000511281 PRADC1Q9BSG0 188 aa2.1□□□□□ -2.07
HMGB1P47-201ENST00000511281 PBDC1Q9BVG4 233 aa2.1□□□□□ -2.07
HMGB1P47-201ENST00000511281 C4BP0C0L5 1744 aa2.1□□□□□ -2.07
HMGB1P47-201ENST00000511281 QSER1Q2KHR3 1735 aa2.1□□□□□ -2.07
HMGB1P47-201ENST00000511281 MRC1P22897 1456 aa2.09□□□□□ -2.07
HMGB1P47-201ENST00000511281 CRPP02741 224 aa2.09□□□□□ -2.07
HMGB1P47-201ENST00000511281 IDO1P14902 403 aa2.09□□□□□ -2.07
HMGB1P47-201ENST00000511281 PDE6HQ13956 83 aa2.09□□□□□ -2.07
HMGB1P47-201ENST00000511281 OR2T10Q8NGZ9 312 aa2.09□□□□□ -2.07
HMGB1P47-201ENST00000511281 SLC35A3Q9Y2D2 325 aa2.09□□□□□ -2.07
HMGB1P47-201ENST00000511281 SOX21Q9Y651 276 aaPredicted RBP2.09□□□□□ -2.07
HMGB1P47-201ENST00000511281 CICQ96RK0 1608 aaPredicted RBP2.09□□□□□ -2.08
HMGB1P47-201ENST00000511281 RFX7Q2KHR2 1363 aa2.09□□□□□ -2.08
HMGB1P47-201ENST00000511281 MYH2Q9UKX2 1941 aa2.09□□□□□ -2.08
HMGB1P47-201ENST00000511281 COL4A5P29400 1685 aa2.09□□□□□ -2.08
HMGB1P47-201ENST00000511281 UTRNP46939 3433 aa2.08□□□□□ -2.08
HMGB1P47-201ENST00000511281 PKD1L3Q7Z443 1732 aa2.08□□□□□ -2.08
HMGB1P47-201ENST00000511281 MAP2P11137 1827 aaKnown RBP2.08□□□□□ -2.08
HMGB1P47-201ENST00000511281 KIF20BQ96Q89 1820 aa2.08□□□□□ -2.08
HMGB1P47-201ENST00000511281 A0A0D9SFI3 127 aa2.08□□□□□ -2.08
HMGB1P47-201ENST00000511281 TRBV6-5A0A0K0K1A5 114 aa2.08□□□□□ -2.08
HMGB1P47-201ENST00000511281 APOA2P02652 100 aa2.08□□□□□ -2.08
HMGB1P47-201ENST00000511281 UBE2BP63146 152 aa2.08□□□□□ -2.08
HMGB1P47-201ENST00000511281 DYNLT1P63172 113 aa2.08□□□□□ -2.08
HMGB1P47-201ENST00000511281 BRMS1LQ5PSV4 323 aa2.08□□□□□ -2.08
HMGB1P47-201ENST00000511281 RPS19BP1Q86WX3 136 aaKnown RBP2.08□□□□□ -2.08
HMGB1P47-201ENST00000511281 SREK1IP1Q8N9Q2 155 aaPredicted RBP2.08□□□□□ -2.08
HMGB1P47-201ENST00000511281 ZNF563Q8TA94 476 aa2.08□□□□□ -2.08
HMGB1P47-201ENST00000511281 SELENOSQ9BQE4 189 aa2.08□□□□□ -2.08
HMGB1P47-201ENST00000511281 RTL8AQ9BWD3 113 aa2.08□□□□□ -2.08
HMGB1P47-201ENST00000511281 MRPL32Q9BYC8 188 aaKnown RBP2.08□□□□□ -2.08
HMGB1P47-201ENST00000511281 CCDC171Q6TFL3 1326 aa2.08□□□□□ -2.08
Retrieved 100 of 20,778 RNA–protein pairs in 75.8 ms