RNA–Protein interactions for RNA: ENST00000508902.5

CLDND1-220, Transcript of claudin domain containing 1, humanhuman

TSL 3

Gene CLDND1, Length 916 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDND1-220ENST00000508902 SLC25A31Q9H0C2 315 aa13.17□□□□□ -0.3
CLDND1-220ENST00000508902 SLC35B3Q9H1N7 401 aa13.17□□□□□ -0.3
CLDND1-220ENST00000508902 RBMY1A1P0DJD3 496 aaKnown RBP13.16□□□□□ -0.3
CLDND1-220ENST00000508902 RBMY1CP0DJD4 496 aa13.16□□□□□ -0.3
CLDND1-220ENST00000508902 ATF4P18848 351 aaPredicted RBP13.16□□□□□ -0.3
CLDND1-220ENST00000508902 FGL1Q08830 312 aa13.16□□□□□ -0.3
CLDND1-220ENST00000508902 RBMY1FQ15415 496 aaKnown RBP13.16□□□□□ -0.3
CLDND1-220ENST00000508902 FAM78BQ5VT40 261 aa13.16□□□□□ -0.3
CLDND1-220ENST00000508902 WDR61Q9GZS3 305 aaKnown RBP13.16□□□□□ -0.3
CLDND1-220ENST00000508902 DNAJC4Q9NNZ3 241 aa13.16□□□□□ -0.3
CLDND1-220ENST00000508902 XCL2Q9UBD3 114 aa13.16□□□□□ -0.3
CLDND1-220ENST00000508902 VPS13DQ5THJ4 4388 aa13.15□□□□□ -0.3
CLDND1-220ENST00000508902 ELOA3CA0A087WX78 387 aaPredicted RBP13.15□□□□□ -0.3
CLDND1-220ENST00000508902 CLUHP3Q96NS8 147 aa13.15□□□□□ -0.3
CLDND1-220ENST00000508902 SMIM3Q9BZL3 60 aa13.15□□□□□ -0.3
CLDND1-220ENST00000508902 C11orf68Q9H3H3 251 aaKnown RBP13.15□□□□□ -0.3
CLDND1-220ENST00000508902 IGHV4-28A0A0C4DH34 117 aa13.14□□□□□ -0.31
CLDND1-220ENST00000508902 G3V3Q6 166 aa13.14□□□□□ -0.31
CLDND1-220ENST00000508902 RPL12P30050 165 aaKnown RBP13.14□□□□□ -0.31
CLDND1-220ENST00000508902 RAB31Q13636 194 aa13.14□□□□□ -0.31
CLDND1-220ENST00000508902 SAT2Q96F10 170 aaPredicted RBP13.14□□□□□ -0.31
CLDND1-220ENST00000508902 ATP5SQ99766 215 aa13.14□□□□□ -0.31
CLDND1-220ENST00000508902 ZNF331Q9NQX6 463 aaPredicted RBP13.14□□□□□ -0.31
CLDND1-220ENST00000508902 MPDU1O75352 247 aa13.13□□□□□ -0.31
CLDND1-220ENST00000508902 RGS21Q2M5E4 152 aa13.13□□□□□ -0.31
CLDND1-220ENST00000508902 SAMD13Q5VXD3 122 aa13.13□□□□□ -0.31
CLDND1-220ENST00000508902 OR4B1Q8NGF8 309 aa13.13□□□□□ -0.31
CLDND1-220ENST00000508902 FAM167A-AS1Q96KT0 104 aa13.13□□□□□ -0.31
CLDND1-220ENST00000508902 MED28Q9H204 178 aa13.13□□□□□ -0.31
CLDND1-220ENST00000508902 RPRMQ9NS64 109 aa13.13□□□□□ -0.31
CLDND1-220ENST00000508902 ZNF586Q9NXT0 402 aa13.13□□□□□ -0.31
CLDND1-220ENST00000508902 ZNF705FA8MVS1 300 aaPredicted RBP13.12□□□□□ -0.31
CLDND1-220ENST00000508902 PRAC2D3DTV9 90 aa13.12□□□□□ -0.31
CLDND1-220ENST00000508902 CNN1P51911 297 aaKnown RBP13.12□□□□□ -0.31
CLDND1-220ENST00000508902 PMS2P11Q13670 270 aa13.12□□□□□ -0.31
CLDND1-220ENST00000508902 TMEM41BQ5BJD5 291 aa13.12□□□□□ -0.31
CLDND1-220ENST00000508902 ZNF705AQ6ZN79 300 aaPredicted RBP13.12□□□□□ -0.31
CLDND1-220ENST00000508902 Q6ZRG5 221 aa13.12□□□□□ -0.31
CLDND1-220ENST00000508902 OR1L4Q8NGR5 311 aa13.12□□□□□ -0.31
CLDND1-220ENST00000508902 SLC25A2Q9BXI2 301 aa13.12□□□□□ -0.31
CLDND1-220ENST00000508902 CRXO43186 299 aaPredicted RBP13.11□□□□□ -0.31
CLDND1-220ENST00000508902 PET100P0DJ07 73 aa13.11□□□□□ -0.31
CLDND1-220ENST00000508902 PYYP10082 97 aa13.11□□□□□ -0.31
CLDND1-220ENST00000508902 S100A7P31151 101 aa13.11□□□□□ -0.31
CLDND1-220ENST00000508902 PSG3Q16557 428 aa13.11□□□□□ -0.31
CLDND1-220ENST00000508902 MIR17HGQ75NE6 70 aa13.11□□□□□ -0.31
CLDND1-220ENST00000508902 BPIFA4PQ86YQ2 179 aa13.11□□□□□ -0.31
CLDND1-220ENST00000508902 C1orf158Q8N1D5 194 aa13.11□□□□□ -0.31
CLDND1-220ENST00000508902 PFDN5Q99471 154 aa13.11□□□□□ -0.31
CLDND1-220ENST00000508902 EIF3GO75821 320 aaKnown RBP eCLIP13.1□□□□□ -0.31
CLDND1-220ENST00000508902 NDUFB4O95168 129 aa13.1□□□□□ -0.31
CLDND1-220ENST00000508902 CXCL2P19875 107 aa13.1□□□□□ -0.31
CLDND1-220ENST00000508902 NANOS2P60321 138 aaKnown RBP13.1□□□□□ -0.31
CLDND1-220ENST00000508902 PSG9Q00887 426 aa13.1□□□□□ -0.31
CLDND1-220ENST00000508902 EBLN2Q6P2I7 272 aa13.1□□□□□ -0.31
CLDND1-220ENST00000508902 LCN15Q6UWW0 184 aa13.1□□□□□ -0.31
CLDND1-220ENST00000508902 ZNF738Q8NE65 137 aa13.1□□□□□ -0.31
CLDND1-220ENST00000508902 MFFQ9GZY8 342 aa13.1□□□□□ -0.31
CLDND1-220ENST00000508902 HRH4Q9H3N8 390 aa13.1□□□□□ -0.31
CLDND1-220ENST00000508902 GIPP09681 153 aaPredicted RBP13.09□□□□□ -0.31
CLDND1-220ENST00000508902 OR8A1Q8NGG7 326 aa13.09□□□□□ -0.31
CLDND1-220ENST00000508902 ZNF503Q96F45 646 aa13.09□□□□□ -0.31
CLDND1-220ENST00000508902 CELA1Q9UNI1 258 aa13.09□□□□□ -0.31
CLDND1-220ENST00000508902 KMT2AQ03164 3969 aa13.08□□□□□ -0.31
CLDND1-220ENST00000508902 M0R2Z0 102 aa13.08□□□□□ -0.32
CLDND1-220ENST00000508902 S100A7AQ86SG5 101 aa13.08□□□□□ -0.32
CLDND1-220ENST00000508902 RPUSD4Q96CM3 377 aaKnown RBP13.08□□□□□ -0.32
CLDND1-220ENST00000508902 TMEM14CQ9P0S9 112 aa13.08□□□□□ -0.32
CLDND1-220ENST00000508902 TRBV19A0A075B6N1 114 aa13.07□□□□□ -0.32
CLDND1-220ENST00000508902 RNF222A6NCQ9 220 aa13.07□□□□□ -0.32
CLDND1-220ENST00000508902 MIFP14174 115 aa13.07□□□□□ -0.32
CLDND1-220ENST00000508902 HIST1H1AQ02539 215 aaPredicted RBP13.07□□□□□ -0.32
CLDND1-220ENST00000508902 SPINK13Q1W4C9 94 aa13.07□□□□□ -0.32
CLDND1-220ENST00000508902 AQP10Q96PS8 301 aa13.07□□□□□ -0.32
CLDND1-220ENST00000508902 SLC50A1Q9BRV3 221 aa13.07□□□□□ -0.32
CLDND1-220ENST00000508902 C1QTNF4Q9BXJ3 329 aa13.07□□□□□ -0.32
CLDND1-220ENST00000508902 PARD6GQ9BYG4 376 aaPredicted RBP13.07□□□□□ -0.32
CLDND1-220ENST00000508902 DNAH6Q9C0G6 4158 aa13.07□□□□□ -0.32
CLDND1-220ENST00000508902 LCE6AA0A183 80 aa13.06□□□□□ -0.32
CLDND1-220ENST00000508902 CXorf65A6NEN9 183 aa13.06□□□□□ -0.32
CLDND1-220ENST00000508902 M0R3E3 92 aa13.06□□□□□ -0.32
CLDND1-220ENST00000508902 PRM2P04554 102 aa13.06□□□□□ -0.32
CLDND1-220ENST00000508902 NUTF2P61970 127 aaKnown RBP13.06□□□□□ -0.32
CLDND1-220ENST00000508902 KIR3DS1Q14943 382 aa13.06□□□□□ -0.32
CLDND1-220ENST00000508902 BAP18Q8IXM2 172 aa13.06□□□□□ -0.32
CLDND1-220ENST00000508902 FFAR4Q5NUL3 377 aa13.05□□□□□ -0.32
CLDND1-220ENST00000508902 FXYD5Q96DB9 178 aa13.05□□□□□ -0.32
CLDND1-220ENST00000508902 NEU1Q99519 415 aa13.05□□□□□ -0.32
CLDND1-220ENST00000508902 RNF24Q9Y225 148 aa13.05□□□□□ -0.32
CLDND1-220ENST00000508902 TRAV12-2A0A075B6T6 113 aa13.04□□□□□ -0.32
CLDND1-220ENST00000508902 DUSP14O95147 198 aaKnown RBP13.04□□□□□ -0.32
CLDND1-220ENST00000508902 HIST1H1EP10412 219 aaKnown RBP13.04□□□□□ -0.32
CLDND1-220ENST00000508902 CEMP1Q6PRD7 247 aaPredicted RBP13.04□□□□□ -0.32
CLDND1-220ENST00000508902 C11orf45Q8TAV5 145 aa13.04□□□□□ -0.32
CLDND1-220ENST00000508902 LRRC20Q8TCA0 184 aa13.04□□□□□ -0.32
CLDND1-220ENST00000508902 PHLDA1Q8WV24 401 aaPredicted RBP13.04□□□□□ -0.32
CLDND1-220ENST00000508902 IGF2BP2-AS1Q96M15 143 aa13.04□□□□□ -0.32
CLDND1-220ENST00000508902 FUT9Q9Y231 359 aa13.04□□□□□ -0.32
CLDND1-220ENST00000508902 IGHV3OR16-12A0A075B7B8 117 aa13.03□□□□□ -0.32
CLDND1-220ENST00000508902 SMLR1H3BR10 107 aa13.03□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 61.9 ms