RNA–Protein interactions for RNA: ENST00000508500.1

LMNA-222, Transcript of lamin A/C, humanhuman

TSL 1 (best)

Gene LMNA, Length 848 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNA-222ENST00000508500 ZNF680Q8NEM1 530 aa11.66□□□□□ -0.54
LMNA-222ENST00000508500 OR10P1Q8NGE3 313 aa11.66□□□□□ -0.54
LMNA-222ENST00000508500 SCRT1Q9BWW7 348 aa11.66□□□□□ -0.54
LMNA-222ENST00000508500 ARV1Q9H2C2 271 aa11.66□□□□□ -0.54
LMNA-222ENST00000508500 SAV1Q9H4B6 383 aaPredicted RBP11.66□□□□□ -0.54
LMNA-222ENST00000508500 HECTD4Q9Y4D8 3996 aa11.65□□□□□ -0.54
LMNA-222ENST00000508500 C11orf94C9JXX5 98 aa11.65□□□□□ -0.54
LMNA-222ENST00000508500 FNDC10F2Z333 226 aa11.65□□□□□ -0.54
LMNA-222ENST00000508500 H3BP45 60 aa11.65□□□□□ -0.54
LMNA-222ENST00000508500 IGKV3-20P01619 116 aa11.65□□□□□ -0.54
LMNA-222ENST00000508500 C12orf74Q32Q52 190 aa11.65□□□□□ -0.54
LMNA-222ENST00000508500 ZNF705AQ6ZN79 300 aaPredicted RBP11.65□□□□□ -0.54
LMNA-222ENST00000508500 ZNF709Q8N972 641 aa11.65□□□□□ -0.54
LMNA-222ENST00000508500 OR5C1Q8NGR4 320 aa11.65□□□□□ -0.54
LMNA-222ENST00000508500 LRRC20Q8TCA0 184 aa11.65□□□□□ -0.54
LMNA-222ENST00000508500 LINC00052Q96N35 136 aa11.65□□□□□ -0.54
LMNA-222ENST00000508500 ATP5SQ99766 215 aa11.65□□□□□ -0.54
LMNA-222ENST00000508500 PMS2P5A8MQ11 134 aa11.64□□□□□ -0.55
LMNA-222ENST00000508500 F6UB75 175 aa11.64□□□□□ -0.55
LMNA-222ENST00000508500 PSMB3P49720 205 aa11.64□□□□□ -0.55
LMNA-222ENST00000508500 TCTAP57738 103 aa11.64□□□□□ -0.55
LMNA-222ENST00000508500 FOXI2Q6ZQN5 318 aa11.64□□□□□ -0.55
LMNA-222ENST00000508500 C20orf173Q96LM9 149 aa11.64□□□□□ -0.55
LMNA-222ENST00000508500 C1QTNF4Q9BXJ3 329 aa11.64□□□□□ -0.55
LMNA-222ENST00000508500 SLC25A32Q9H2D1 315 aa11.64□□□□□ -0.55
LMNA-222ENST00000508500 DNAH17Q9UFH2 4485 aa11.64□□□□□ -0.55
LMNA-222ENST00000508500 DNAH2Q9P225 4427 aa11.63□□□□□ -0.55
LMNA-222ENST00000508500 TRAV10A0A0B4J240 114 aa11.63□□□□□ -0.55
LMNA-222ENST00000508500 ZNF705FA8MVS1 300 aaPredicted RBP11.63□□□□□ -0.55
LMNA-222ENST00000508500 CST7O76096 145 aa11.63□□□□□ -0.55
LMNA-222ENST00000508500 IFNA5P01569 189 aa11.63□□□□□ -0.55
LMNA-222ENST00000508500 FABP1P07148 127 aa11.63□□□□□ -0.55
LMNA-222ENST00000508500 METTL15P1P0C7V9 234 aa11.63□□□□□ -0.55
LMNA-222ENST00000508500 ZNF705DP0CH99 300 aaPredicted RBP11.63□□□□□ -0.55
LMNA-222ENST00000508500 ZNF705BP0CI00 300 aaPredicted RBP11.63□□□□□ -0.55
LMNA-222ENST00000508500 NUTF2P61970 127 aaKnown RBP11.63□□□□□ -0.55
LMNA-222ENST00000508500 OR8I2Q8N0Y5 310 aa11.63□□□□□ -0.55
LMNA-222ENST00000508500 CLUHP3Q96NS8 147 aa11.63□□□□□ -0.55
LMNA-222ENST00000508500 SLC35B3Q9H1N7 401 aa11.63□□□□□ -0.55
LMNA-222ENST00000508500 PFDN2Q9UHV9 154 aa11.63□□□□□ -0.55
LMNA-222ENST00000508500 IGHV4-4A0A075B6R2 117 aa11.62□□□□□ -0.55
LMNA-222ENST00000508500 ZNF98A6NK75 572 aa11.62□□□□□ -0.55
LMNA-222ENST00000508500 SEC11BP0C7V7 166 aa11.62□□□□□ -0.55
LMNA-222ENST00000508500 ID1P41134 155 aa11.62□□□□□ -0.55
LMNA-222ENST00000508500 DLK1P80370 383 aa11.62□□□□□ -0.55
LMNA-222ENST00000508500 SLC38A11Q08AI6 406 aa11.62□□□□□ -0.55
LMNA-222ENST00000508500 VWC2Q2TAL6 325 aa11.62□□□□□ -0.55
LMNA-222ENST00000508500 RPL7L1Q6DKI1 246 aaKnown RBP11.62□□□□□ -0.55
LMNA-222ENST00000508500 GNPNAT1Q96EK6 184 aaPredicted RBP11.62□□□□□ -0.55
LMNA-222ENST00000508500 NEU1Q99519 415 aa11.62□□□□□ -0.55
LMNA-222ENST00000508500 TMEM147Q9BVK8 224 aa11.62□□□□□ -0.55
LMNA-222ENST00000508500 FAT2Q9NYQ8 4349 aa11.61□□□□□ -0.55
LMNA-222ENST00000508500 A0A0J9YX75 114 aa11.61□□□□□ -0.55
LMNA-222ENST00000508500 ISLRO14498 428 aa11.61□□□□□ -0.55
LMNA-222ENST00000508500 NDUFA5Q16718 116 aa11.61□□□□□ -0.55
LMNA-222ENST00000508500 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa11.61□□□□□ -0.55
LMNA-222ENST00000508500 SMIM3Q9BZL3 60 aa11.61□□□□□ -0.55
LMNA-222ENST00000508500 SLC25A22Q9H936 323 aa11.61□□□□□ -0.55
LMNA-222ENST00000508500 WFDC1Q9HC57 220 aa11.61□□□□□ -0.55
LMNA-222ENST00000508500 SLC45A2Q9UMX9 530 aa11.61□□□□□ -0.55
LMNA-222ENST00000508500 PCLOQ9Y6V0 5065 aa11.6□□□□□ -0.55
LMNA-222ENST00000508500 A8MTW9 85 aa11.6□□□□□ -0.55
LMNA-222ENST00000508500 MPDU1O75352 247 aa11.6□□□□□ -0.55
LMNA-222ENST00000508500 CFDP00746 253 aaPredicted RBP11.6□□□□□ -0.55
LMNA-222ENST00000508500 ORM2P19652 201 aa11.6□□□□□ -0.55
LMNA-222ENST00000508500 RAB14P61106 215 aa11.6□□□□□ -0.55
LMNA-222ENST00000508500 FAM78BQ5VT40 261 aa11.6□□□□□ -0.55
LMNA-222ENST00000508500 TMEM144Q7Z5S9 345 aa11.6□□□□□ -0.55
LMNA-222ENST00000508500 C1orf158Q8N1D5 194 aa11.6□□□□□ -0.55
LMNA-222ENST00000508500 OR4B1Q8NGF8 309 aa11.6□□□□□ -0.55
LMNA-222ENST00000508500 SCGB1C1Q8TD33 95 aa11.6□□□□□ -0.55
LMNA-222ENST00000508500 RSG1Q9BU20 258 aa11.6□□□□□ -0.55
LMNA-222ENST00000508500 UQCC1Q9NVA1 299 aa11.6□□□□□ -0.55
LMNA-222ENST00000508500 TRAV8-2A0A0B4J237 113 aa11.59□□□□□ -0.55
LMNA-222ENST00000508500 RAB5CP51148 216 aa11.59□□□□□ -0.55
LMNA-222ENST00000508500 AKR1C1Q04828 323 aa11.59□□□□□ -0.55
LMNA-222ENST00000508500 ARL16Q0P5N6 197 aa11.59□□□□□ -0.55
LMNA-222ENST00000508500 CLINT1Q14677 625 aa11.59□□□□□ -0.55
LMNA-222ENST00000508500 IGFL4Q6B9Z1 124 aa11.59□□□□□ -0.55
LMNA-222ENST00000508500 AMTNQ6UX39 209 aa11.59□□□□□ -0.55
LMNA-222ENST00000508500 BPIFCQ8NFQ6 507 aa11.59□□□□□ -0.55
LMNA-222ENST00000508500 OR1B1Q8NGR6 318 aa11.59□□□□□ -0.55
LMNA-222ENST00000508500 PSMG3Q9BT73 122 aaPredicted RBP11.59□□□□□ -0.55
LMNA-222ENST00000508500 TIMM9Q9Y5J7 89 aa11.59□□□□□ -0.55
LMNA-222ENST00000508500 NACAE9PAV3 2078 aa11.58□□□□□ -0.56
LMNA-222ENST00000508500 IGHV3OR16-12A0A075B7B8 117 aa11.58□□□□□ -0.56
LMNA-222ENST00000508500 DEFB131BA0A096LNP1 70 aa11.58□□□□□ -0.56
LMNA-222ENST00000508500 UMAD1C9J7I0 102 aa11.58□□□□□ -0.56
LMNA-222ENST00000508500 H3BRN7 92 aa11.58□□□□□ -0.56
LMNA-222ENST00000508500 SERF2P84101 59 aa11.58□□□□□ -0.56
LMNA-222ENST00000508500 PSG9Q00887 426 aa11.58□□□□□ -0.56
LMNA-222ENST00000508500 CLLU1Q5K131 121 aa11.58□□□□□ -0.56
LMNA-222ENST00000508500 SPATA31B1PQ5VZV4 182 aa11.58□□□□□ -0.56
LMNA-222ENST00000508500 CYP2G1PQ6ZSU1 146 aa11.58□□□□□ -0.56
LMNA-222ENST00000508500 RNF141Q8WVD5 230 aa11.58□□□□□ -0.56
LMNA-222ENST00000508500 C16orf92Q96LL3 132 aa11.58□□□□□ -0.56
LMNA-222ENST00000508500 WDR61Q9GZS3 305 aaKnown RBP11.58□□□□□ -0.56
LMNA-222ENST00000508500 NPVFQ9HCQ7 196 aa11.58□□□□□ -0.56
LMNA-222ENST00000508500 PLA2G2EQ9NZK7 142 aa11.58□□□□□ -0.56
LMNA-222ENST00000508500 DOK5Q9P104 306 aa11.58□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 83.6 ms