RNA–Protein interactions for RNA: ENST00000507823.5

SFXN1-208, Transcript of sideroflexin 1, humanhuman

TSL 2

Gene SFXN1, Length 2,611 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFXN1-208ENST00000507823 SMAD5-AS1Q9Y6J3 95 aa13.69□□□□□ -0.22
SFXN1-208ENST00000507823 TRAV8-1A0A0A6YYK1 113 aa13.69□□□□□ -0.22
SFXN1-208ENST00000507823 PCP4L1A6NKN8 68 aa13.69□□□□□ -0.22
SFXN1-208ENST00000507823 K7EQM0 130 aa13.69□□□□□ -0.22
SFXN1-208ENST00000507823 M0QZK8 103 aa13.69□□□□□ -0.22
SFXN1-208ENST00000507823 IGHG2P01859 326 aa13.69□□□□□ -0.22
SFXN1-208ENST00000507823 OR4B1Q8NGF8 309 aa13.69□□□□□ -0.22
SFXN1-208ENST00000507823 NEU1Q99519 415 aa13.69□□□□□ -0.22
SFXN1-208ENST00000507823 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP13.68□□□□□ -0.222e-13■■■■■ 44.1
SFXN1-208ENST00000507823 A0A087X0K7 114 aa13.68□□□□□ -0.22
SFXN1-208ENST00000507823 TMEM18Q96B42 140 aa13.68□□□□□ -0.22
SFXN1-208ENST00000507823 A0A1B0GXF2 115 aa13.68□□□□□ -0.22
SFXN1-208ENST00000507823 CLPSL1A2RUU4 121 aa13.68□□□□□ -0.22
SFXN1-208ENST00000507823 H3BUA1 57 aa13.68□□□□□ -0.22
SFXN1-208ENST00000507823 AVPP01185 164 aa13.68□□□□□ -0.22
SFXN1-208ENST00000507823 COX8CQ7Z4L0 72 aa13.68□□□□□ -0.22
SFXN1-208ENST00000507823 AAMDCQ9H7C9 122 aa13.68□□□□□ -0.22
SFXN1-208ENST00000507823 GSN-AS1Q9NRJ2 163 aa13.68□□□□□ -0.22
SFXN1-208ENST00000507823 VPS13CQ709C8 3753 aa13.68□□□□□ -0.22
SFXN1-208ENST00000507823 A8MWL6 223 aa13.67□□□□□ -0.22
SFXN1-208ENST00000507823 P01737 135 aa13.67□□□□□ -0.22
SFXN1-208ENST00000507823 CRISP2P16562 243 aa13.67□□□□□ -0.22
SFXN1-208ENST00000507823 MRPL54Q6P161 138 aaKnown RBP13.67□□□□□ -0.22
SFXN1-208ENST00000507823 LINC01356Q8N9X3 169 aa13.67□□□□□ -0.22
SFXN1-208ENST00000507823 PSG8Q9UQ74 426 aa13.67□□□□□ -0.22
SFXN1-208ENST00000507823 BUB3O43684 328 aa13.67□□□□□ -0.22
SFXN1-208ENST00000507823 LINC00310P59036 64 aa13.67□□□□□ -0.22
SFXN1-208ENST00000507823 JOSD1Q15040 202 aaPredicted RBP13.67□□□□□ -0.22
SFXN1-208ENST00000507823 PRNTQ86SH4 94 aa13.67□□□□□ -0.22
SFXN1-208ENST00000507823 TMEM256Q8N2U0 113 aa13.67□□□□□ -0.22
SFXN1-208ENST00000507823 ZNF580Q9UK33 172 aa13.67□□□□□ -0.22
SFXN1-208ENST00000507823 SOX21Q9Y651 276 aaPredicted RBP13.67□□□□□ -0.22
SFXN1-208ENST00000507823 CSMD1Q96PZ7 3565 aa13.66□□□□□ -0.22
SFXN1-208ENST00000507823 FBLL1A6NHQ2 334 aaKnown RBP13.66□□□□□ -0.22
SFXN1-208ENST00000507823 HIGD1CA8MV81 97 aa13.66□□□□□ -0.22
SFXN1-208ENST00000507823 SLC35B1P78383 322 aa13.66□□□□□ -0.22
SFXN1-208ENST00000507823 ATP5G2Q06055 141 aa13.66□□□□□ -0.22
SFXN1-208ENST00000507823 CIARTQ8N365 385 aaPredicted RBP13.66□□□□□ -0.22
SFXN1-208ENST00000507823 ZNF331Q9NQX6 463 aaPredicted RBP13.66□□□□□ -0.22
SFXN1-208ENST00000507823 SVEP1Q4LDE5 3571 aa13.66□□□□□ -0.22
SFXN1-208ENST00000507823 H3BUX3 64 aa13.66□□□□□ -0.22
SFXN1-208ENST00000507823 J3QLI3 93 aa13.66□□□□□ -0.22
SFXN1-208ENST00000507823 M0R3E3 92 aa13.66□□□□□ -0.22
SFXN1-208ENST00000507823 SPINK4O60575 86 aa13.66□□□□□ -0.22
SFXN1-208ENST00000507823 PPIFP30405 207 aaKnown RBP13.66□□□□□ -0.22
SFXN1-208ENST00000507823 C1orf194Q5T5A4 169 aa13.66□□□□□ -0.22
SFXN1-208ENST00000507823 CLEC19AQ6UXS0 136 aa13.66□□□□□ -0.22
SFXN1-208ENST00000507823 U3KQE9 123 aa13.66□□□□□ -0.22
SFXN1-208ENST00000507823 FOXA3P55318 350 aaPredicted RBP13.65□□□□□ -0.22
SFXN1-208ENST00000507823 A0A1B0GUS0 222 aa13.65□□□□□ -0.22
SFXN1-208ENST00000507823 NUPR1O60356 82 aa13.65□□□□□ -0.22
SFXN1-208ENST00000507823 IGHG4P01861 327 aa13.65□□□□□ -0.22
SFXN1-208ENST00000507823 RELQ04864 619 aaPredicted RBP13.65□□□□□ -0.22
SFXN1-208ENST00000507823 OR10J3Q5JRS4 329 aa13.65□□□□□ -0.22
SFXN1-208ENST00000507823 OR5R1Q8NH85 324 aa13.65□□□□□ -0.22
SFXN1-208ENST00000507823 GTSF1Q8WW33 167 aa13.65□□□□□ -0.22
SFXN1-208ENST00000507823 ZC2HC1AQ96GY0 325 aa13.65□□□□□ -0.22
SFXN1-208ENST00000507823 GRIFINA4D1Z8 144 aa13.64□□□□□ -0.23
SFXN1-208ENST00000507823 GDF5OSQ5U4N7 250 aa13.64□□□□□ -0.23
SFXN1-208ENST00000507823 DAZAP1Q96EP5 407 aaKnown RBP13.64□□□□□ -0.23
SFXN1-208ENST00000507823 MS4A10Q96PG2 267 aa13.64□□□□□ -0.23
SFXN1-208ENST00000507823 LOXL1Q08397 574 aaPredicted RBP13.64□□□□□ -0.23
SFXN1-208ENST00000507823 CDPF1Q6NVV7 123 aa13.64□□□□□ -0.23
SFXN1-208ENST00000507823 Q71RC1 249 aaPredicted RBP13.64□□□□□ -0.23
SFXN1-208ENST00000507823 CSN1S1P47710 185 aa13.63□□□□□ -0.23
SFXN1-208ENST00000507823 APCSP02743 223 aa13.62□□□□□ -0.23
SFXN1-208ENST00000507823 COL8A1P27658 744 aa13.62□□□□□ -0.23
SFXN1-208ENST00000507823 RBPMS2Q6ZRY4 209 aaKnown RBP13.62□□□□□ -0.23
SFXN1-208ENST00000507823 GZMBP10144 247 aa13.62□□□□□ -0.23
SFXN1-208ENST00000507823 PAFAH1B2P68402 229 aa13.62□□□□□ -0.23
SFXN1-208ENST00000507823 LY6EQ16553 131 aa13.62□□□□□ -0.23
SFXN1-208ENST00000507823 TCF24Q7RTU0 167 aa13.62□□□□□ -0.23
SFXN1-208ENST00000507823 USMG5Q96IX5 58 aa13.62□□□□□ -0.23
SFXN1-208ENST00000507823 GNB4Q9HAV0 340 aa13.62□□□□□ -0.23
SFXN1-208ENST00000507823 BEX4Q9NWD9 120 aaPredicted RBP13.62□□□□□ -0.23
SFXN1-208ENST00000507823 CRIP1P50238 77 aa13.61□□□□□ -0.23
SFXN1-208ENST00000507823 SLAQ13239 276 aa13.61□□□□□ -0.23
SFXN1-208ENST00000507823 LRRC75A-AS1Q8N1F1 130 aa13.61□□□□□ -0.23
SFXN1-208ENST00000507823 NOL4LQ96MY1 436 aaPredicted RBP13.61□□□□□ -0.23
SFXN1-208ENST00000507823 PRDM13Q9H4Q3 707 aa13.61□□□□□ -0.23
SFXN1-208ENST00000507823 IGHV3-35A0A0C4DH35 117 aa13.61□□□□□ -0.23
SFXN1-208ENST00000507823 TRGV3P03979 118 aa13.61□□□□□ -0.23
SFXN1-208ENST00000507823 CFHR3Q02985 330 aa13.61□□□□□ -0.23
SFXN1-208ENST00000507823 FBN2P35556 2912 aa13.61□□□□□ -0.23
SFXN1-208ENST00000507823 CHEK1O14757 476 aa13.6□□□□□ -0.23
SFXN1-208ENST00000507823 SERF1AO75920 110 aa13.6□□□□□ -0.23
SFXN1-208ENST00000507823 FSHBP01225 129 aa13.6□□□□□ -0.23
SFXN1-208ENST00000507823 APOHP02749 345 aaPredicted RBP13.6□□□□□ -0.23
SFXN1-208ENST00000507823 RAB4BP61018 213 aa13.6□□□□□ -0.23
SFXN1-208ENST00000507823 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa13.6□□□□□ -0.23
SFXN1-208ENST00000507823 IGLV1-40P01703 118 aa13.6□□□□□ -0.23
SFXN1-208ENST00000507823 HBBP68871 147 aa13.6□□□□□ -0.23
SFXN1-208ENST00000507823 METTL26Q96S19 204 aa13.6□□□□□ -0.23
SFXN1-208ENST00000507823 LINC00527Q9UJ94 153 aa13.6□□□□□ -0.23
SFXN1-208ENST00000507823 A1L4Q6 167 aa13.6□□□□□ -0.23
SFXN1-208ENST00000507823 C9orf152Q5JTZ5 239 aa13.6□□□□□ -0.23
SFXN1-208ENST00000507823 OR2D3Q8NGH3 330 aa13.6□□□□□ -0.23
SFXN1-208ENST00000507823 SLC50A1Q9BRV3 221 aa13.6□□□□□ -0.23
SFXN1-208ENST00000507823 LRRK2Q5S007 2527 aa13.59□□□□□ -0.23
SFXN1-208ENST00000507823 FAM208BQ5VWN6 2430 aa13.59□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 142.4 ms