RNA–Protein interactions for RNA: ENST00000505998.5

NIPBL-205, Transcript of NIPBL, cohesin loading factor, humanhuman

TSL 5

Gene NIPBL, Length 969 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPBL-205ENST00000505998 LYNX1P0DP58 116 aa3.7□□□□□ -1.82
NIPBL-205ENST00000505998 FABP4P15090 132 aa3.7□□□□□ -1.82
NIPBL-205ENST00000505998 CXCL2P19875 107 aa3.7□□□□□ -1.82
NIPBL-205ENST00000505998 AKR1C2P52895 323 aa3.7□□□□□ -1.82
NIPBL-205ENST00000505998 DLX6P56179 175 aa3.7□□□□□ -1.82
NIPBL-205ENST00000505998 MEF2CQ06413 473 aaPredicted RBP3.7□□□□□ -1.82
NIPBL-205ENST00000505998 CLEC12BQ2HXU8 276 aa3.7□□□□□ -1.82
NIPBL-205ENST00000505998 UBE2NLQ5JXB2 153 aa3.7□□□□□ -1.82
NIPBL-205ENST00000505998 LY6G6FQ5SQ64 297 aa3.7□□□□□ -1.82
NIPBL-205ENST00000505998 FAM201AQ5SY85 155 aa3.7□□□□□ -1.82
NIPBL-205ENST00000505998 ZNF660Q6AZW8 331 aaPredicted RBP3.7□□□□□ -1.82
NIPBL-205ENST00000505998 ZNF705AQ6ZN79 300 aaPredicted RBP3.7□□□□□ -1.82
NIPBL-205ENST00000505998 NIT1Q86X76 327 aa3.7□□□□□ -1.82
NIPBL-205ENST00000505998 SLC35G3Q8N808 338 aa3.7□□□□□ -1.82
NIPBL-205ENST00000505998 WFDC11Q8NEX6 87 aa3.7□□□□□ -1.82
NIPBL-205ENST00000505998 OR52E5Q8NH55 327 aa3.7□□□□□ -1.82
NIPBL-205ENST00000505998 CCL17Q92583 94 aa3.7□□□□□ -1.82
NIPBL-205ENST00000505998 GPR146Q96CH1 333 aa3.7□□□□□ -1.82
NIPBL-205ENST00000505998 SEH1LQ96EE3 360 aa3.7□□□□□ -1.82
NIPBL-205ENST00000505998 ZNF488Q96MN9 340 aa3.7□□□□□ -1.82
NIPBL-205ENST00000505998 SIGMAR1Q99720 223 aa3.7□□□□□ -1.82
NIPBL-205ENST00000505998 SLC25A31Q9H0C2 315 aa3.7□□□□□ -1.82
NIPBL-205ENST00000505998 BEX1Q9HBH7 125 aa3.7□□□□□ -1.82
NIPBL-205ENST00000505998 MMP26Q9NRE1 261 aa3.7□□□□□ -1.82
NIPBL-205ENST00000505998 UQCC1Q9NVA1 299 aa3.7□□□□□ -1.82
NIPBL-205ENST00000505998 NECAP2Q9NVZ3 263 aa3.7□□□□□ -1.82
NIPBL-205ENST00000505998 MRPL27Q9P0M9 148 aaKnown RBP3.7□□□□□ -1.82
NIPBL-205ENST00000505998 SS18L2Q9UHA2 77 aa3.7□□□□□ -1.82
NIPBL-205ENST00000505998 PSG8Q9UQ74 426 aa3.7□□□□□ -1.82
NIPBL-205ENST00000505998 NACAE9PAV3 2078 aa3.7□□□□□ -1.82
NIPBL-205ENST00000505998 HIVEP2P31629 2446 aa3.69□□□□□ -1.82
NIPBL-205ENST00000505998 KIR2DS1A0A191URI9 304 aa3.69□□□□□ -1.82
NIPBL-205ENST00000505998 PSMB11A5LHX3 300 aa3.69□□□□□ -1.82
NIPBL-205ENST00000505998 CDS2O95674 445 aa3.69□□□□□ -1.82
NIPBL-205ENST00000505998 TMEM50AO95807 157 aa3.69□□□□□ -1.82
NIPBL-205ENST00000505998 MT-ND4P03905 459 aa3.69□□□□□ -1.82
NIPBL-205ENST00000505998 OR5G3P0C626 314 aa3.69□□□□□ -1.82
NIPBL-205ENST00000505998 ESDP10768 282 aa3.69□□□□□ -1.82
NIPBL-205ENST00000505998 HIST1H1DP16402 221 aaKnown RBP3.69□□□□□ -1.82
NIPBL-205ENST00000505998 USF1P22415 310 aaPredicted RBP3.69□□□□□ -1.82
NIPBL-205ENST00000505998 CD34P28906 385 aa3.69□□□□□ -1.82
NIPBL-205ENST00000505998 LTC4SQ16873 150 aa3.69□□□□□ -1.82
NIPBL-205ENST00000505998 PIGYQ3MUY2 71 aa3.69□□□□□ -1.82
NIPBL-205ENST00000505998 TPTE2P1Q5T6R2 138 aa3.69□□□□□ -1.82
NIPBL-205ENST00000505998 FAM78BQ5VT40 261 aa3.69□□□□□ -1.82
NIPBL-205ENST00000505998 DUX4L9Q6RFH8 374 aaPredicted RBP3.69□□□□□ -1.82
NIPBL-205ENST00000505998 LYPD2Q6UXB3 125 aa3.69□□□□□ -1.82
NIPBL-205ENST00000505998 HEPN1Q6WQI6 88 aa3.69□□□□□ -1.82
NIPBL-205ENST00000505998 TMEM183AQ8IXX5 376 aa3.69□□□□□ -1.82
NIPBL-205ENST00000505998 CMTM1Q8IZ96 169 aa3.69□□□□□ -1.82
NIPBL-205ENST00000505998 C6orf223Q8N319 242 aa3.69□□□□□ -1.82
NIPBL-205ENST00000505998 SMIM20Q8N5G0 67 aa3.69□□□□□ -1.82
NIPBL-205ENST00000505998 FAM216BQ8N7L0 139 aa3.69□□□□□ -1.82
NIPBL-205ENST00000505998 C8orf31Q8N9H6 132 aa3.69□□□□□ -1.82
NIPBL-205ENST00000505998 GPER1Q99527 375 aa3.69□□□□□ -1.82
NIPBL-205ENST00000505998 HIST1H2BLQ99880 126 aa3.69□□□□□ -1.82
NIPBL-205ENST00000505998 C20orf24Q9BUV8 137 aa3.69□□□□□ -1.82
NIPBL-205ENST00000505998 ARL6Q9H0F7 186 aa3.69□□□□□ -1.82
NIPBL-205ENST00000505998 OR5AC2Q9NZP5 309 aa3.69□□□□□ -1.82
NIPBL-205ENST00000505998 NAT8Q9UHE5 227 aa3.69□□□□□ -1.82
NIPBL-205ENST00000505998 RPUSD1Q9UJJ7 312 aaKnown RBP3.69□□□□□ -1.82
NIPBL-205ENST00000505998 VPREB3Q9UKI3 123 aa3.69□□□□□ -1.82
NIPBL-205ENST00000505998 C14orf166Q9Y224 244 aaKnown RBP3.69□□□□□ -1.82
NIPBL-205ENST00000505998 OR51B2Q9Y5P1 312 aa3.69□□□□□ -1.82
NIPBL-205ENST00000505998 LINC00312Q9Y6C7 94 aa3.69□□□□□ -1.82
NIPBL-205ENST00000505998 A0A0D9SG52 128 aa3.68□□□□□ -1.82
NIPBL-205ENST00000505998 ZNF705GA8MUZ8 300 aaPredicted RBP3.68□□□□□ -1.82
NIPBL-205ENST00000505998 C17orf98A8MV24 154 aa3.68□□□□□ -1.82
NIPBL-205ENST00000505998 B4DSR2 109 aa3.68□□□□□ -1.82
NIPBL-205ENST00000505998 C15orf65H3BRN8 121 aa3.68□□□□□ -1.82
NIPBL-205ENST00000505998 CLDN34H7C241 214 aa3.68□□□□□ -1.82
NIPBL-205ENST00000505998 J3QLI3 93 aa3.68□□□□□ -1.82
NIPBL-205ENST00000505998 M0R1W7 72 aa3.68□□□□□ -1.82
NIPBL-205ENST00000505998 SOCS1O15524 211 aa3.68□□□□□ -1.82
NIPBL-205ENST00000505998 FGF16O43320 207 aa3.68□□□□□ -1.82
NIPBL-205ENST00000505998 FOXH1O75593 365 aa3.68□□□□□ -1.82
NIPBL-205ENST00000505998 EIF4EP06730 217 aaKnown RBP3.68□□□□□ -1.82
NIPBL-205ENST00000505998 SERPINE2P07093 398 aa3.68□□□□□ -1.82
NIPBL-205ENST00000505998 CRYGBP07316 175 aa3.68□□□□□ -1.82
NIPBL-205ENST00000505998 MSMBP08118 114 aa3.68□□□□□ -1.82
NIPBL-205ENST00000505998 OR5H8P0DN80 308 aa3.68□□□□□ -1.82
NIPBL-205ENST00000505998 NFYBP25208 207 aa3.68□□□□□ -1.82
NIPBL-205ENST00000505998 OR10J1P30954 320 aa3.68□□□□□ -1.82
NIPBL-205ENST00000505998 ZNF137PP52743 207 aa3.68□□□□□ -1.82
NIPBL-205ENST00000505998 PLP1P60201 277 aa3.68□□□□□ -1.82
NIPBL-205ENST00000505998 S100A10P60903 97 aa3.68□□□□□ -1.82
NIPBL-205ENST00000505998 SSBP1Q04837 148 aaKnown RBP3.68□□□□□ -1.82
NIPBL-205ENST00000505998 DAZ2Q13117 558 aaKnown RBP3.68□□□□□ -1.82
NIPBL-205ENST00000505998 PRSS8Q16651 343 aa3.68□□□□□ -1.82
NIPBL-205ENST00000505998 PDZD11Q5EBL8 140 aa3.68□□□□□ -1.82
NIPBL-205ENST00000505998 RNASEKQ6P5S7 137 aaKnown RBP3.68□□□□□ -1.82
NIPBL-205ENST00000505998 PRSS54Q6PEW0 395 aa3.68□□□□□ -1.82
NIPBL-205ENST00000505998 PNKDQ8N490 385 aa3.68□□□□□ -1.82
NIPBL-205ENST00000505998 C20orf203Q8NBC4 194 aa3.68□□□□□ -1.82
NIPBL-205ENST00000505998 SUMF2Q8NBJ7 301 aa3.68□□□□□ -1.82
NIPBL-205ENST00000505998 DEFB108BQ8NET1 73 aa3.68□□□□□ -1.82
NIPBL-205ENST00000505998 OR8B3Q8NGG8 313 aa3.68□□□□□ -1.82
NIPBL-205ENST00000505998 OR1S2Q8NGQ3 325 aa3.68□□□□□ -1.82
NIPBL-205ENST00000505998 OR1P1Q8NH06 330 aa3.68□□□□□ -1.82
NIPBL-205ENST00000505998 PLPPR1Q8TBJ4 325 aa3.68□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 56.1 ms