RNA–Protein interactions for RNA: ENST00000502802.1

HMGB1P3-201, Transcript of high mobility group box 1 pseudogene 3, humanhuman

BASIC

Gene HMGB1P3, Length 616 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P3-201ENST00000502802 ROS1P08922 2347 aa2.64□□□□□ -1.99
HMGB1P3-201ENST00000502802 A0A087WUU8 490 aa2.63□□□□□ -1.99
HMGB1P3-201ENST00000502802 CLDN24A6NM45 220 aa2.63□□□□□ -1.99
HMGB1P3-201ENST00000502802 IGHV1-69P01742 117 aa2.63□□□□□ -1.99
HMGB1P3-201ENST00000502802 C8GP07360 202 aa2.63□□□□□ -1.99
HMGB1P3-201ENST00000502802 SCGB1A1P11684 91 aa2.63□□□□□ -1.99
HMGB1P3-201ENST00000502802 G0S2P27469 103 aa2.63□□□□□ -1.99
HMGB1P3-201ENST00000502802 OR4D2P58180 307 aa2.63□□□□□ -1.99
HMGB1P3-201ENST00000502802 RANP62826 216 aaKnown RBP2.63□□□□□ -1.99
HMGB1P3-201ENST00000502802 BTG2P78543 158 aa2.63□□□□□ -1.99
HMGB1P3-201ENST00000502802 IFITM2Q01629 132 aa2.63□□□□□ -1.99
HMGB1P3-201ENST00000502802 PMAIP1Q13794 54 aa2.63□□□□□ -1.99
HMGB1P3-201ENST00000502802 SPATA12Q7Z6I5 190 aa2.63□□□□□ -1.99
HMGB1P3-201ENST00000502802 RPS19BP1Q86WX3 136 aaKnown RBP2.63□□□□□ -1.99
HMGB1P3-201ENST00000502802 SLC22A24Q8N4F4 322 aa2.63□□□□□ -1.99
HMGB1P3-201ENST00000502802 PACRGLQ8N7B6 248 aa2.63□□□□□ -1.99
HMGB1P3-201ENST00000502802 CLDN22Q8N7P3 220 aa2.63□□□□□ -1.99
HMGB1P3-201ENST00000502802 MAFIPQ8WZ33 124 aa2.63□□□□□ -1.99
HMGB1P3-201ENST00000502802 SFRP2Q96HF1 295 aa2.63□□□□□ -1.99
HMGB1P3-201ENST00000502802 NMNAT3Q96T66 252 aa2.63□□□□□ -1.99
HMGB1P3-201ENST00000502802 PCBD2Q9H0N5 130 aa2.63□□□□□ -1.99
HMGB1P3-201ENST00000502802 TMEM222Q9H0R3 208 aa2.63□□□□□ -1.99
HMGB1P3-201ENST00000502802 GPR84Q9NQS5 396 aa2.63□□□□□ -1.99
HMGB1P3-201ENST00000502802 CTNNBIP1Q9NSA3 81 aaPredicted RBP2.63□□□□□ -1.99
HMGB1P3-201ENST00000502802 GID8Q9NWU2 228 aa2.63□□□□□ -1.99
HMGB1P3-201ENST00000502802 SMPXQ9UHP9 88 aa2.63□□□□□ -1.99
HMGB1P3-201ENST00000502802 ABCA2Q9BZC7 2435 aa2.63□□□□□ -1.99
HMGB1P3-201ENST00000502802 HEATR1Q9H583 2144 aaKnown RBP2.63□□□□□ -1.99
HMGB1P3-201ENST00000502802 A0A1B0GV72 72 aa2.62□□□□□ -1.99
HMGB1P3-201ENST00000502802 EEF1E1-BLOC1S5C9J1V9 151 aa2.62□□□□□ -1.99
HMGB1P3-201ENST00000502802 F8W036 122 aa2.62□□□□□ -1.99
HMGB1P3-201ENST00000502802 CHP2O43745 196 aa2.62□□□□□ -1.99
HMGB1P3-201ENST00000502802 PPBPP02775 128 aa2.62□□□□□ -1.99
HMGB1P3-201ENST00000502802 CRHP06850 196 aa2.62□□□□□ -1.99
HMGB1P3-201ENST00000502802 CD79AP11912 226 aa2.62□□□□□ -1.99
HMGB1P3-201ENST00000502802 COX6B1P14854 86 aa2.62□□□□□ -1.99
HMGB1P3-201ENST00000502802 RPL27AP46776 148 aaKnown RBP2.62□□□□□ -1.99
HMGB1P3-201ENST00000502802 GABRA2P47869 451 aa2.62□□□□□ -1.99
HMGB1P3-201ENST00000502802 TAS2R30P59541 319 aa2.62□□□□□ -1.99
HMGB1P3-201ENST00000502802 TNFAIP6P98066 277 aaPredicted RBP2.62□□□□□ -1.99
HMGB1P3-201ENST00000502802 TNFRSF9Q07011 255 aa2.62□□□□□ -1.99
HMGB1P3-201ENST00000502802 TFF3Q07654 80 aa2.62□□□□□ -1.99
HMGB1P3-201ENST00000502802 SPANXN3Q5MJ09 141 aa2.62□□□□□ -1.99
HMGB1P3-201ENST00000502802 BRD3OSQ6XYD6 125 aa2.62□□□□□ -1.99
HMGB1P3-201ENST00000502802 C2orf91Q6ZV80 131 aa2.62□□□□□ -1.99
HMGB1P3-201ENST00000502802 SLC35F6Q8N357 371 aa2.62□□□□□ -1.99
HMGB1P3-201ENST00000502802 OR1L8Q8NGR8 309 aa2.62□□□□□ -1.99
HMGB1P3-201ENST00000502802 OR10J5Q8NHC4 309 aa2.62□□□□□ -1.99
HMGB1P3-201ENST00000502802 NEK7Q8TDX7 302 aa2.62□□□□□ -1.99
HMGB1P3-201ENST00000502802 MIEN1Q9BRT3 115 aa2.62□□□□□ -1.99
HMGB1P3-201ENST00000502802 CCDC90BQ9GZT6 254 aa2.62□□□□□ -1.99
HMGB1P3-201ENST00000502802 SPANXA1Q9NS26 97 aa2.62□□□□□ -1.99
HMGB1P3-201ENST00000502802 TAAR3PQ9P1P4 343 aa2.62□□□□□ -1.99
HMGB1P3-201ENST00000502802 AK3Q9UIJ7 227 aa2.62□□□□□ -1.99
HMGB1P3-201ENST00000502802 ARL2BPQ9Y2Y0 163 aa2.62□□□□□ -1.99
HMGB1P3-201ENST00000502802 MINOS1-NBL1R4GNA1 71 aa2.62□□□□□ -1.99
HMGB1P3-201ENST00000502802 DNHD1Q96M86 4753 aa2.62□□□□□ -1.99
HMGB1P3-201ENST00000502802 FBN1P35555 2871 aaKnown RBP2.62□□□□□ -1.99
HMGB1P3-201ENST00000502802 MXRA5Q9NR99 2828 aa2.61□□□□□ -1.99
HMGB1P3-201ENST00000502802 CADP27708 2225 aa2.61□□□□□ -1.99
HMGB1P3-201ENST00000502802 CHD3Q12873 2000 aaKnown RBP2.61□□□□□ -1.99
HMGB1P3-201ENST00000502802 JMJD1CQ15652 2540 aa2.61□□□□□ -1.99
HMGB1P3-201ENST00000502802 A0A0G2JMM0 328 aa2.61□□□□□ -1.99
HMGB1P3-201ENST00000502802 A0A1B0GW54 56 aa2.61□□□□□ -1.99
HMGB1P3-201ENST00000502802 A0A1W2PPB8 328 aa2.61□□□□□ -1.99
HMGB1P3-201ENST00000502802 A0A1W2PRS3 328 aa2.61□□□□□ -1.99
HMGB1P3-201ENST00000502802 KIR3DP1A8MWS1 328 aa2.61□□□□□ -1.99
HMGB1P3-201ENST00000502802 INMT-MINDY4F8WBC2 141 aa2.61□□□□□ -1.99
HMGB1P3-201ENST00000502802 H3BPC8 53 aa2.61□□□□□ -1.99
HMGB1P3-201ENST00000502802 PSMD12O00232 456 aaPredicted RBP2.61□□□□□ -1.99
HMGB1P3-201ENST00000502802 LST1O00453 97 aa2.61□□□□□ -1.99
HMGB1P3-201ENST00000502802 PIAS1O75925 651 aa2.61□□□□□ -1.99
HMGB1P3-201ENST00000502802 SERPINA1P01009 418 aa2.61□□□□□ -1.99
HMGB1P3-201ENST00000502802 NBEAP1P0C6P0 100 aa2.61□□□□□ -1.99
HMGB1P3-201ENST00000502802 GZMBP10144 247 aa2.61□□□□□ -1.99
HMGB1P3-201ENST00000502802 COX4I1P13073 169 aa2.61□□□□□ -1.99
HMGB1P3-201ENST00000502802 S100PP25815 95 aa2.61□□□□□ -1.99
HMGB1P3-201ENST00000502802 RBM11P57052 281 aaKnown RBP2.61□□□□□ -1.99
HMGB1P3-201ENST00000502802 PSME3P61289 254 aa2.61□□□□□ -1.99
HMGB1P3-201ENST00000502802 CAV1Q03135 178 aa2.61□□□□□ -1.99
HMGB1P3-201ENST00000502802 TSNQ15631 228 aaKnown RBP2.61□□□□□ -1.99
HMGB1P3-201ENST00000502802 LRRC25Q8N386 305 aaPredicted RBP2.61□□□□□ -1.99
HMGB1P3-201ENST00000502802 OR4C16Q8NGL9 310 aa2.61□□□□□ -1.99
HMGB1P3-201ENST00000502802 SGMS2Q8NHU3 365 aa2.61□□□□□ -1.99
HMGB1P3-201ENST00000502802 OR52E6Q96RD3 313 aa2.61□□□□□ -1.99
HMGB1P3-201ENST00000502802 AIF1LQ9BQI0 150 aa2.61□□□□□ -1.99
HMGB1P3-201ENST00000502802 PRTFDC1Q9NRG1 225 aa2.61□□□□□ -1.99
HMGB1P3-201ENST00000502802 OR52A1Q9UKL2 312 aa2.61□□□□□ -1.99
HMGB1P3-201ENST00000502802 ANGPT4Q9Y264 503 aa2.61□□□□□ -1.99
HMGB1P3-201ENST00000502802 ALPK2Q86TB3 2170 aa2.61□□□□□ -1.99
HMGB1P3-201ENST00000502802 ANK3Q12955 4377 aaKnown RBP2.61□□□□□ -1.99
HMGB1P3-201ENST00000502802 CSPG4Q6UVK1 2322 aa2.6□□□□□ -1.99
HMGB1P3-201ENST00000502802 USF3Q68DE3 2245 aa2.6□□□□□ -1.99
HMGB1P3-201ENST00000502802 CR1P17927 2039 aa2.6□□□□□ -1.99
HMGB1P3-201ENST00000502802 IGHV3-15A0A0B4J1V0 119 aa2.6□□□□□ -1.99
HMGB1P3-201ENST00000502802 A0A0J9YX75 114 aa2.6□□□□□ -1.99
HMGB1P3-201ENST00000502802 PQLC2LA1A4F0 135 aa2.6□□□□□ -1.99
HMGB1P3-201ENST00000502802 TMEM235A6NFC5 223 aa2.6□□□□□ -1.99
HMGB1P3-201ENST00000502802 RFPL4AA6NLU0 287 aa2.6□□□□□ -1.99
HMGB1P3-201ENST00000502802 RFPL4AL1F8VTS6 287 aa2.6□□□□□ -1.99
Retrieved 100 of 20,778 RNA–protein pairs in 52.7 ms