RNA–Protein interactions for RNA: ENST00000493758.5

ITGB1-216, Transcript of integrin subunit beta 1, humanhuman

TSL 3

Gene ITGB1, Length 366 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-216ENST00000493758 DEFA1P59665 94 aa0.61□□□□□ -2.31
ITGB1-216ENST00000493758 RPS20P60866 119 aaKnown RBP0.61□□□□□ -2.31
ITGB1-216ENST00000493758 AESQ08117 197 aa0.61□□□□□ -2.31
ITGB1-216ENST00000493758 RGS21Q2M5E4 152 aa0.61□□□□□ -2.31
ITGB1-216ENST00000493758 ZNF826PQ6ZT77 177 aa0.61□□□□□ -2.31
ITGB1-216ENST00000493758 TRAPPC6BQ86SZ2 158 aa0.61□□□□□ -2.31
ITGB1-216ENST00000493758 PHF13Q86YI8 300 aaPredicted RBP0.61□□□□□ -2.31
ITGB1-216ENST00000493758 HIST3H2BBQ8N257 126 aa0.61□□□□□ -2.31
ITGB1-216ENST00000493758 ZNF565Q8N9K5 539 aa0.61□□□□□ -2.31
ITGB1-216ENST00000493758 C15orf53Q8NAA6 179 aa0.61□□□□□ -2.31
ITGB1-216ENST00000493758 OR8J2Q8NGG1 315 aa0.61□□□□□ -2.31
ITGB1-216ENST00000493758 OR5A1Q8NGJ0 315 aa0.61□□□□□ -2.31
ITGB1-216ENST00000493758 TSPAN32Q96QS1 320 aa0.61□□□□□ -2.31
ITGB1-216ENST00000493758 SLC50A1Q9BRV3 221 aa0.61□□□□□ -2.31
ITGB1-216ENST00000493758 TMEM147Q9BVK8 224 aa0.61□□□□□ -2.31
ITGB1-216ENST00000493758 TRIM4Q9C037 500 aa0.61□□□□□ -2.31
ITGB1-216ENST00000493758 TRABDQ9H4I3 376 aa0.61□□□□□ -2.31
ITGB1-216ENST00000493758 MRPL27Q9P0M9 148 aaKnown RBP0.61□□□□□ -2.31
ITGB1-216ENST00000493758 TP73-AS1Q9UF72 201 aa0.61□□□□□ -2.31
ITGB1-216ENST00000493758 ERGIC3Q9Y282 383 aa0.61□□□□□ -2.31
ITGB1-216ENST00000493758 DLG5Q8TDM6 1919 aa0.61□□□□□ -2.31
ITGB1-216ENST00000493758 KDM6AO15550 1401 aaPredicted RBP0.61□□□□□ -2.31
ITGB1-216ENST00000493758 RIC1Q4ADV7 1423 aa0.61□□□□□ -2.31
ITGB1-216ENST00000493758 MIA2Q96PC5 1412 aa0.61□□□□□ -2.31
ITGB1-216ENST00000493758 CNTLNQ9NXG0 1405 aa0.61□□□□□ -2.31
ITGB1-216ENST00000493758 MAP2P11137 1827 aaKnown RBP0.61□□□□□ -2.31
ITGB1-216ENST00000493758 MYH11P35749 1972 aa0.61□□□□□ -2.31
ITGB1-216ENST00000493758 UBR1Q8IWV7 1749 aa0.61□□□□□ -2.31
ITGB1-216ENST00000493758 PLECQ15149 4684 aaKnown RBP0.61□□□□□ -2.31
ITGB1-216ENST00000493758 NKTRP30414 1462 aaKnown RBP0.61□□□□□ -2.31
ITGB1-216ENST00000493758 FANCMQ8IYD8 2048 aa0.6□□□□□ -2.31
ITGB1-216ENST00000493758 COL14A1Q05707 1796 aaKnown RBP0.6□□□□□ -2.31
ITGB1-216ENST00000493758 LRP2P98164 4655 aa0.6□□□□□ -2.31
ITGB1-216ENST00000493758 MTUS2Q5JR59 1369 aa0.6□□□□□ -2.31
ITGB1-216ENST00000493758 ALMS1Q8TCU4 4167 aa0.6□□□□□ -2.31
ITGB1-216ENST00000493758 CTTNBP2Q8WZ74 1663 aa0.6□□□□□ -2.31
ITGB1-216ENST00000493758 TSC2P49815 1807 aa0.6□□□□□ -2.31
ITGB1-216ENST00000493758 IGKV1D-42A0A075B6H8 117 aa0.6□□□□□ -2.31
ITGB1-216ENST00000493758 CNIH1O95406 144 aa0.6□□□□□ -2.31
ITGB1-216ENST00000493758 ASAH2BP0C7U1 165 aa0.6□□□□□ -2.31
ITGB1-216ENST00000493758 CRYGAP11844 174 aa0.6□□□□□ -2.31
ITGB1-216ENST00000493758 COX6A1P12074 109 aa0.6□□□□□ -2.31
ITGB1-216ENST00000493758 SPI1P17947 270 aa0.6□□□□□ -2.31
ITGB1-216ENST00000493758 FKBP2P26885 142 aaKnown RBP0.6□□□□□ -2.31
ITGB1-216ENST00000493758 BRS3P32247 399 aa0.6□□□□□ -2.31
ITGB1-216ENST00000493758 CDKN2CP42773 168 aa0.6□□□□□ -2.31
ITGB1-216ENST00000493758 EDDM3AQ14507 147 aa0.6□□□□□ -2.31
ITGB1-216ENST00000493758 RHEBQ15382 184 aa0.6□□□□□ -2.31
ITGB1-216ENST00000493758 SPA17Q15506 151 aa0.6□□□□□ -2.31
ITGB1-216ENST00000493758 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP0.6□□□□□ -2.31
ITGB1-216ENST00000493758 Q6ZQT0 140 aa0.6□□□□□ -2.31
ITGB1-216ENST00000493758 SMIM5Q71RC9 77 aa0.6□□□□□ -2.31
ITGB1-216ENST00000493758 OOSP2Q86WS3 158 aa0.6□□□□□ -2.31
ITGB1-216ENST00000493758 OR6V1Q8N148 313 aa0.6□□□□□ -2.31
ITGB1-216ENST00000493758 SIGLECL1Q8N7X8 197 aa0.6□□□□□ -2.31
ITGB1-216ENST00000493758 OR4C6Q8NH72 309 aa0.6□□□□□ -2.31
ITGB1-216ENST00000493758 TERB2Q8NHR7 220 aa0.6□□□□□ -2.31
ITGB1-216ENST00000493758 CT55Q8WUE5 264 aa0.6□□□□□ -2.31
ITGB1-216ENST00000493758 AQP3Q92482 292 aa0.6□□□□□ -2.31
ITGB1-216ENST00000493758 C20orf27Q9GZN8 174 aa0.6□□□□□ -2.31
ITGB1-216ENST00000493758 OR51V1Q9H2C8 321 aa0.6□□□□□ -2.31
ITGB1-216ENST00000493758 MIXL1Q9H2W2 232 aa0.6□□□□□ -2.31
ITGB1-216ENST00000493758 OSTCQ9NRP0 149 aa0.6□□□□□ -2.31
ITGB1-216ENST00000493758 CTNNBIP1Q9NSA3 81 aaPredicted RBP0.6□□□□□ -2.31
ITGB1-216ENST00000493758 V9GYY5 206 aaPredicted RBP0.6□□□□□ -2.31
ITGB1-216ENST00000493758 AHCTF1Q8WYP5 2266 aa0.6□□□□□ -2.31
ITGB1-216ENST00000493758 SONP18583 2426 aaKnown RBP0.6□□□□□ -2.31
ITGB1-216ENST00000493758 LRP1BQ9NZR2 4599 aa0.6□□□□□ -2.31
ITGB1-216ENST00000493758 NALCNQ8IZF0 1738 aa0.6□□□□□ -2.31
ITGB1-216ENST00000493758 MYO5CQ9NQX4 1742 aa0.6□□□□□ -2.31
ITGB1-216ENST00000493758 FREM1Q5H8C1 2179 aa0.6□□□□□ -2.31
ITGB1-216ENST00000493758 CNTRLQ7Z7A1 2325 aa0.6□□□□□ -2.31
ITGB1-216ENST00000493758 MYO3BQ8WXR4 1341 aa0.6□□□□□ -2.31
ITGB1-216ENST00000493758 C1orf167Q5SNV9 1468 aa0.6□□□□□ -2.31
ITGB1-216ENST00000493758 PLEKHH2Q8IVE3 1493 aa0.6□□□□□ -2.31
ITGB1-216ENST00000493758 CLTCL1P53675 1640 aa0.6□□□□□ -2.31
ITGB1-216ENST00000493758 MAST2Q6P0Q8 1798 aa0.6□□□□□ -2.31
ITGB1-216ENST00000493758 KDM3BQ7LBC6 1761 aa0.6□□□□□ -2.31
ITGB1-216ENST00000493758 DNAH6Q9C0G6 4158 aa0.6□□□□□ -2.31
ITGB1-216ENST00000493758 USP54Q70EL1 1684 aa0.59□□□□□ -2.31
ITGB1-216ENST00000493758 DNAH10Q8IVF4 4471 aa0.59□□□□□ -2.31
ITGB1-216ENST00000493758 ROS1P08922 2347 aa0.59□□□□□ -2.31
ITGB1-216ENST00000493758 MUC4Q99102 2169 aa0.59□□□□□ -2.31
ITGB1-216ENST00000493758 BAZ2BQ9UIF8 2168 aaKnown RBP0.59□□□□□ -2.31
ITGB1-216ENST00000493758 PLXNA1Q9UIW2 1896 aa0.59□□□□□ -2.31
ITGB1-216ENST00000493758 FAM236DA0A1B0GTK5 79 aa0.59□□□□□ -2.31
ITGB1-216ENST00000493758 hADV38S2A0JD32 116 aa0.59□□□□□ -2.31
ITGB1-216ENST00000493758 BUB1B-PAK6H3BSN5 160 aa0.59□□□□□ -2.31
ITGB1-216ENST00000493758 J3QRK9 145 aa0.59□□□□□ -2.31
ITGB1-216ENST00000493758 GEMIN2O14893 280 aaKnown RBP0.59□□□□□ -2.31
ITGB1-216ENST00000493758 HCRTO43612 131 aa0.59□□□□□ -2.31
ITGB1-216ENST00000493758 FADS1O60427 444 aa0.59□□□□□ -2.31
ITGB1-216ENST00000493758 OR2B3O76000 313 aa0.59□□□□□ -2.31
ITGB1-216ENST00000493758 CTSDP07339 412 aaPredicted RBP0.59□□□□□ -2.31
ITGB1-216ENST00000493758 BAALC-AS2P0C853 105 aa0.59□□□□□ -2.31
ITGB1-216ENST00000493758 SMIM10L2AP0DMW4 78 aa0.59□□□□□ -2.31
ITGB1-216ENST00000493758 SMIM10L2BP0DMW5 78 aa0.59□□□□□ -2.31
ITGB1-216ENST00000493758 FAM236CP0DP71 79 aa0.59□□□□□ -2.31
ITGB1-216ENST00000493758 PPIBP23284 216 aaKnown RBP0.59□□□□□ -2.31
ITGB1-216ENST00000493758 CASP1P29466 404 aa0.59□□□□□ -2.31
Retrieved 100 of 20,778 RNA–protein pairs in 79.6 ms