RNA–Protein interactions for RNA: ENST00000493456.5

NUP50-218, Transcript of nucleoporin 50, humanhuman

TSL 3

Gene NUP50, Length 478 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-218ENST00000493456 HIGD1AQ9Y241 93 aa12.15□□□□□ -0.46
NUP50-218ENST00000493456 GAGE12BA1L429 117 aa12.14□□□□□ -0.47
NUP50-218ENST00000493456 SNURFLB1AK76 121 aa12.14□□□□□ -0.47
NUP50-218ENST00000493456 CTDSPLO15194 276 aa12.14□□□□□ -0.47
NUP50-218ENST00000493456 RGS5O15539 181 aa12.14□□□□□ -0.47
NUP50-218ENST00000493456 GAGE7O76087 117 aa12.14□□□□□ -0.47
NUP50-218ENST00000493456 GAGE12FP0CL80 117 aa12.14□□□□□ -0.47
NUP50-218ENST00000493456 GAGE12GP0CL81 117 aa12.14□□□□□ -0.47
NUP50-218ENST00000493456 GAGE12IP0CL82 117 aa12.14□□□□□ -0.47
NUP50-218ENST00000493456 SLC25A6P12236 298 aa12.14□□□□□ -0.47
NUP50-218ENST00000493456 S100A7AQ86SG5 101 aa12.14□□□□□ -0.47
NUP50-218ENST00000493456 LRRC20Q8TCA0 184 aa12.14□□□□□ -0.47
NUP50-218ENST00000493456 RPUSD4Q96CM3 377 aaKnown RBP12.14□□□□□ -0.47
NUP50-218ENST00000493456 MIXL1Q9H2W2 232 aa12.14□□□□□ -0.47
NUP50-218ENST00000493456 HYPMO75409 117 aa12.13□□□□□ -0.47
NUP50-218ENST00000493456 CTF1Q16619 201 aa12.13□□□□□ -0.47
NUP50-218ENST00000493456 RABL2AQ9UBK7 228 aaPredicted RBP12.13□□□□□ -0.47
NUP50-218ENST00000493456 RABL2BQ9UNT1 228 aa12.13□□□□□ -0.47
NUP50-218ENST00000493456 RNF24Q9Y225 148 aa12.13□□□□□ -0.47
NUP50-218ENST00000493456 ANKRD20A5PA0PJZ0 165 aa12.12□□□□□ -0.47
NUP50-218ENST00000493456 SIVA1O15304 175 aa12.12□□□□□ -0.47
NUP50-218ENST00000493456 SYNGR2O43760 224 aa12.12□□□□□ -0.47
NUP50-218ENST00000493456 IL5P05113 134 aa12.12□□□□□ -0.47
NUP50-218ENST00000493456 CXCL2P19875 107 aa12.12□□□□□ -0.47
NUP50-218ENST00000493456 PLP1P60201 277 aa12.12□□□□□ -0.47
NUP50-218ENST00000493456 CYP2G1PQ6ZSU1 146 aa12.12□□□□□ -0.47
NUP50-218ENST00000493456 ACOT7LQ6ZUV0 252 aa12.12□□□□□ -0.47
NUP50-218ENST00000493456 A0A096LPF7 62 aa12.11□□□□□ -0.47
NUP50-218ENST00000493456 IFNA5P01569 189 aa12.11□□□□□ -0.47
NUP50-218ENST00000493456 LINC00869P0C866 280 aa12.11□□□□□ -0.47
NUP50-218ENST00000493456 IL18Q14116 193 aa12.11□□□□□ -0.47
NUP50-218ENST00000493456 TMPRSS5Q9H3S3 457 aa12.11□□□□□ -0.47
NUP50-218ENST00000493456 MCUBQ9NWR8 336 aa12.11□□□□□ -0.47
NUP50-218ENST00000493456 WRBO00258 174 aa12.1□□□□□ -0.47
NUP50-218ENST00000493456 OR5G3P0C626 314 aa12.1□□□□□ -0.47
NUP50-218ENST00000493456 FUSP35637 526 aaKnown RBP eCLIP12.1□□□□□ -0.47
NUP50-218ENST00000493456 SELENOTP62341 195 aa12.1□□□□□ -0.47
NUP50-218ENST00000493456 DAZ2Q13117 558 aaKnown RBP12.1□□□□□ -0.47
NUP50-218ENST00000493456 SPANXN5Q5MJ07 72 aa12.1□□□□□ -0.47
NUP50-218ENST00000493456 GFI1BQ5VTD9 330 aa12.1□□□□□ -0.47
NUP50-218ENST00000493456 LCN15Q6UWW0 184 aa12.1□□□□□ -0.47
NUP50-218ENST00000493456 NFE4Q86UQ8 179 aa12.1□□□□□ -0.47
NUP50-218ENST00000493456 LRTM2Q8N967 370 aa12.1□□□□□ -0.47
NUP50-218ENST00000493456 SLC50A1Q9BRV3 221 aa12.1□□□□□ -0.47
NUP50-218ENST00000493456 NAA50Q9GZZ1 169 aaKnown RBP12.1□□□□□ -0.47
NUP50-218ENST00000493456 STRAPQ9Y3F4 350 aaKnown RBP12.1□□□□□ -0.47
NUP50-218ENST00000493456 ICAM4Q14773 271 aa12.09□□□□□ -0.47
NUP50-218ENST00000493456 KIR3DS1Q14943 382 aa12.09□□□□□ -0.47
NUP50-218ENST00000493456 VSIG2Q96IQ7 327 aa12.09□□□□□ -0.47
NUP50-218ENST00000493456 C18orf15Q96N68 181 aa12.09□□□□□ -0.47
NUP50-218ENST00000493456 FLG2Q5D862 2391 aaPredicted RBP12.08□□□□□ -0.47
NUP50-218ENST00000493456 SMCO3A2RU48 225 aa12.08□□□□□ -0.48
NUP50-218ENST00000493456 CTDSP2O14595 271 aa12.08□□□□□ -0.48
NUP50-218ENST00000493456 KRTAP10-1P60331 282 aa12.08□□□□□ -0.48
NUP50-218ENST00000493456 TMEM128Q5BJH2 165 aa12.08□□□□□ -0.48
NUP50-218ENST00000493456 ZNF331Q9NQX6 463 aaPredicted RBP12.08□□□□□ -0.48
NUP50-218ENST00000493456 TRGV2A0A075B6R0 118 aa12.07□□□□□ -0.48
NUP50-218ENST00000493456 PMS2P5A8MQ11 134 aa12.07□□□□□ -0.48
NUP50-218ENST00000493456 H3BP45 60 aa12.07□□□□□ -0.48
NUP50-218ENST00000493456 MRPS12O15235 138 aaKnown RBP12.07□□□□□ -0.48
NUP50-218ENST00000493456 NXPH4O95158 308 aa12.07□□□□□ -0.48
NUP50-218ENST00000493456 PRB4P10163 310 aaPredicted RBP12.07□□□□□ -0.48
NUP50-218ENST00000493456 ANXA7P20073 488 aaKnown RBP12.07□□□□□ -0.48
NUP50-218ENST00000493456 Q6ZTI0 123 aa12.07□□□□□ -0.48
NUP50-218ENST00000493456 CCDC190Q86UF4 302 aa12.07□□□□□ -0.48
NUP50-218ENST00000493456 DIRAS2Q96HU8 199 aa12.07□□□□□ -0.48
NUP50-218ENST00000493456 PYGO2Q9BRQ0 406 aa12.07□□□□□ -0.48
NUP50-218ENST00000493456 A0A087WTM6 91 aa12.06□□□□□ -0.48
NUP50-218ENST00000493456 FAM229AH3BQW9 127 aa12.06□□□□□ -0.48
NUP50-218ENST00000493456 TMED4Q7Z7H5 227 aa12.06□□□□□ -0.48
NUP50-218ENST00000493456 ODF3Q96PU9 254 aa12.06□□□□□ -0.48
NUP50-218ENST00000493456 PARD6GQ9BYG4 376 aaPredicted RBP12.06□□□□□ -0.48
NUP50-218ENST00000493456 ARL6Q9H0F7 186 aa12.06□□□□□ -0.48
NUP50-218ENST00000493456 DNAH10OSP0CZ25 163 aa12.05□□□□□ -0.48
NUP50-218ENST00000493456 VAMP1P23763 118 aa12.05□□□□□ -0.48
NUP50-218ENST00000493456 PXDC1Q5TGL8 231 aa12.05□□□□□ -0.48
NUP50-218ENST00000493456 ZNF680Q8NEM1 530 aa12.05□□□□□ -0.48
NUP50-218ENST00000493456 ARV1Q9H2C2 271 aa12.05□□□□□ -0.48
NUP50-218ENST00000493456 RSL24D1Q9UHA3 163 aaKnown RBP12.05□□□□□ -0.48
NUP50-218ENST00000493456 ICOSQ9Y6W8 199 aa12.05□□□□□ -0.48
NUP50-218ENST00000493456 K7EPK0 472 aa12.04□□□□□ -0.48
NUP50-218ENST00000493456 LEPP41159 167 aa12.04□□□□□ -0.48
NUP50-218ENST00000493456 PATE2Q6UY27 113 aa12.04□□□□□ -0.48
NUP50-218ENST00000493456 Q6ZSN1 163 aa12.04□□□□□ -0.48
NUP50-218ENST00000493456 TRAV9-2A0A087WT02 112 aa12.03□□□□□ -0.48
NUP50-218ENST00000493456 TRAV12-3A0A0B4J271 114 aa12.03□□□□□ -0.48
NUP50-218ENST00000493456 SMR3BP02814 79 aaPredicted RBP12.03□□□□□ -0.48
NUP50-218ENST00000493456 GCSHP23434 173 aa12.03□□□□□ -0.48
NUP50-218ENST00000493456 FAUP35544 74 aaKnown RBP12.03□□□□□ -0.48
NUP50-218ENST00000493456 C4orf46Q504U0 113 aa12.03□□□□□ -0.48
NUP50-218ENST00000493456 BPIFA4PQ86YQ2 179 aa12.03□□□□□ -0.48
NUP50-218ENST00000493456 MDFICQ9P1T7 246 aa12.03□□□□□ -0.48
NUP50-218ENST00000493456 PXMP4Q9Y6I8 212 aa12.03□□□□□ -0.48
NUP50-218ENST00000493456 PRAC2D3DTV9 90 aa12.02□□□□□ -0.49
NUP50-218ENST00000493456 FNDC10F2Z333 226 aa12.02□□□□□ -0.49
NUP50-218ENST00000493456 J3KRW8 73 aa12.02□□□□□ -0.49
NUP50-218ENST00000493456 K7EP13 123 aa12.02□□□□□ -0.49
NUP50-218ENST00000493456 HOXB5P09067 269 aa12.02□□□□□ -0.49
NUP50-218ENST00000493456 LINC00305Q7Z4B0 112 aa12.02□□□□□ -0.49
NUP50-218ENST00000493456 ZNF431Q8TF32 576 aaPredicted RBP12.02□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 76.5 ms