RNA–Protein interactions for RNA: ENST00000493455.6

HPS4-216, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 3

Gene HPS4, Length 986 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-216ENST00000493455 H3BQ15 152 aa11.78□□□□□ -0.52
HPS4-216ENST00000493455 K7EQG2 157 aa11.78□□□□□ -0.52
HPS4-216ENST00000493455 PSMG4Q5JS54 123 aa11.78□□□□□ -0.52
HPS4-216ENST00000493455 DCANP1Q8TF63 244 aa11.78□□□□□ -0.52
HPS4-216ENST00000493455 RNF141Q8WVD5 230 aa11.78□□□□□ -0.52
HPS4-216ENST00000493455 ZNF503Q96F45 646 aa11.78□□□□□ -0.52
HPS4-216ENST00000493455 MAP1LC3BQ9GZQ8 125 aa11.78□□□□□ -0.52
HPS4-216ENST00000493455 ZNF586Q9NXT0 402 aa11.78□□□□□ -0.52
HPS4-216ENST00000493455 TMEM14CQ9P0S9 112 aa11.78□□□□□ -0.52
HPS4-216ENST00000493455 MGAM2Q2M2H8 2515 aa11.77□□□□□ -0.53
HPS4-216ENST00000493455 A0A087X0K7 114 aa11.77□□□□□ -0.53
HPS4-216ENST00000493455 SLC17A3O00476 420 aa11.77□□□□□ -0.53
HPS4-216ENST00000493455 STAG3L2P0CL84 134 aa11.77□□□□□ -0.53
HPS4-216ENST00000493455 STAG3L3P0CL85 134 aa11.77□□□□□ -0.53
HPS4-216ENST00000493455 IGLC2P0DOY2 106 aa11.77□□□□□ -0.53
HPS4-216ENST00000493455 HLA-DMBP28068 263 aa11.77□□□□□ -0.53
HPS4-216ENST00000493455 ID1P41134 155 aa11.77□□□□□ -0.53
HPS4-216ENST00000493455 MEOX2P50222 304 aa11.77□□□□□ -0.53
HPS4-216ENST00000493455 RNF182Q8N6D2 247 aa11.77□□□□□ -0.53
HPS4-216ENST00000493455 OR11H12B2RN74 326 aa11.76□□□□□ -0.53
HPS4-216ENST00000493455 CXorf1O96002 111 aa11.76□□□□□ -0.53
HPS4-216ENST00000493455 HIST1H1EP10412 219 aaKnown RBP11.76□□□□□ -0.53
HPS4-216ENST00000493455 SULT1A2P50226 295 aa11.76□□□□□ -0.53
HPS4-216ENST00000493455 DEFB131AP59861 70 aa11.76□□□□□ -0.53
HPS4-216ENST00000493455 SNRPD3P62318 126 aaKnown RBP11.76□□□□□ -0.53
HPS4-216ENST00000493455 ZNF124Q15973 351 aa11.76□□□□□ -0.53
HPS4-216ENST00000493455 PQLC2Q6ZP29 291 aa11.76□□□□□ -0.53
HPS4-216ENST00000493455 APRG1Q8IVJ8 170 aa11.76□□□□□ -0.53
HPS4-216ENST00000493455 SFT2D1Q8WV19 159 aa11.76□□□□□ -0.53
HPS4-216ENST00000493455 FXYD5Q96DB9 178 aa11.76□□□□□ -0.53
HPS4-216ENST00000493455 HRH4Q9H3N8 390 aa11.76□□□□□ -0.53
HPS4-216ENST00000493455 MAP6D1Q9H9H5 199 aa11.76□□□□□ -0.53
HPS4-216ENST00000493455 AURKAIP1Q9NWT8 199 aaPredicted RBP11.76□□□□□ -0.53
HPS4-216ENST00000493455 TRAV2A0A0B4J234 112 aa11.75□□□□□ -0.53
HPS4-216ENST00000493455 SOCS3O14543 225 aa11.75□□□□□ -0.53
HPS4-216ENST00000493455 NBEAP1P0C6P0 100 aa11.75□□□□□ -0.53
HPS4-216ENST00000493455 GCHFRP30047 84 aa11.75□□□□□ -0.53
HPS4-216ENST00000493455 DEFB1P60022 68 aa11.75□□□□□ -0.53
HPS4-216ENST00000493455 ODF3L2Q3SX64 289 aa11.75□□□□□ -0.53
HPS4-216ENST00000493455 KPRPQ5T749 579 aaPredicted RBP11.75□□□□□ -0.53
HPS4-216ENST00000493455 DEFB125Q8N687 156 aa11.75□□□□□ -0.53
HPS4-216ENST00000493455 PHYHIPLQ96FC7 376 aa11.75□□□□□ -0.53
HPS4-216ENST00000493455 SLC50A1Q9BRV3 221 aa11.75□□□□□ -0.53
HPS4-216ENST00000493455 TMPRSS5Q9H3S3 457 aa11.75□□□□□ -0.53
HPS4-216ENST00000493455 TRBV19A0A075B6N1 114 aa11.74□□□□□ -0.53
HPS4-216ENST00000493455 TRAV8-2A0A0B4J237 113 aa11.74□□□□□ -0.53
HPS4-216ENST00000493455 ZNF705EA8MWA4 302 aaPredicted RBP11.74□□□□□ -0.53
HPS4-216ENST00000493455 ISLRO14498 428 aa11.74□□□□□ -0.53
HPS4-216ENST00000493455 H2AFB1P0C5Y9 115 aa11.74□□□□□ -0.53
HPS4-216ENST00000493455 PSMB3P49720 205 aa11.74□□□□□ -0.53
HPS4-216ENST00000493455 RAB5CP51148 216 aa11.74□□□□□ -0.53
HPS4-216ENST00000493455 GUK1Q16774 197 aa11.74□□□□□ -0.53
HPS4-216ENST00000493455 DPPA3Q6W0C5 159 aa11.74□□□□□ -0.53
HPS4-216ENST00000493455 ZNF738Q8NE65 137 aa11.74□□□□□ -0.53
HPS4-216ENST00000493455 C20orf173Q96LM9 149 aa11.74□□□□□ -0.53
HPS4-216ENST00000493455 UBE2G2P60604 165 aa11.73□□□□□ -0.53
HPS4-216ENST00000493455 RANP62826 216 aaKnown RBP11.73□□□□□ -0.53
HPS4-216ENST00000493455 EXOC3-AS1Q8N2X6 119 aa11.73□□□□□ -0.53
HPS4-216ENST00000493455 SRD5A3Q9H8P0 318 aa11.73□□□□□ -0.53
HPS4-216ENST00000493455 ZNF331Q9NQX6 463 aaPredicted RBP11.73□□□□□ -0.53
HPS4-216ENST00000493455 RPH3ALQ9UNE2 315 aa11.73□□□□□ -0.53
HPS4-216ENST00000493455 KNCNA6PVL3 124 aa11.72□□□□□ -0.53
HPS4-216ENST00000493455 NDUFB4O95168 129 aa11.72□□□□□ -0.53
HPS4-216ENST00000493455 PSG9Q00887 426 aa11.72□□□□□ -0.53
HPS4-216ENST00000493455 ICAM4Q14773 271 aa11.72□□□□□ -0.53
HPS4-216ENST00000493455 DEFB121Q5J5C9 76 aa11.72□□□□□ -0.53
HPS4-216ENST00000493455 SAMD13Q5VXD3 122 aa11.72□□□□□ -0.53
HPS4-216ENST00000493455 PCNPQ8WW12 178 aaKnown RBP11.72□□□□□ -0.53
HPS4-216ENST00000493455 SAT2Q96F10 170 aaPredicted RBP11.72□□□□□ -0.53
HPS4-216ENST00000493455 AAMDCQ9H7C9 122 aa11.72□□□□□ -0.53
HPS4-216ENST00000493455 TUBA4BQ9H853 241 aa11.72□□□□□ -0.53
HPS4-216ENST00000493455 TMEM167BQ9NRX6 74 aa11.72□□□□□ -0.53
HPS4-216ENST00000493455 NOTCH1P46531 2555 aa11.72□□□□□ -0.53
HPS4-216ENST00000493455 ZNF705FA8MVS1 300 aaPredicted RBP11.71□□□□□ -0.53
HPS4-216ENST00000493455 F6UB75 175 aa11.71□□□□□ -0.53
HPS4-216ENST00000493455 CMC4P56277 68 aaPredicted RBP11.71□□□□□ -0.53
HPS4-216ENST00000493455 DEFA6Q01524 100 aa11.71□□□□□ -0.53
HPS4-216ENST00000493455 ACTL10Q5JWF8 245 aa11.71□□□□□ -0.53
HPS4-216ENST00000493455 TEX261Q6UWH6 196 aa11.71□□□□□ -0.53
HPS4-216ENST00000493455 Q8N1Y9 231 aa11.71□□□□□ -0.53
HPS4-216ENST00000493455 Q9H3A6 140 aa11.71□□□□□ -0.53
HPS4-216ENST00000493455 AGRNO00468 2067 aa11.71□□□□□ -0.54
HPS4-216ENST00000493455 K7EIL1 84 aa11.7□□□□□ -0.54
HPS4-216ENST00000493455 IFNA7P01567 189 aa11.7□□□□□ -0.54
HPS4-216ENST00000493455 ZNF705DP0CH99 300 aaPredicted RBP11.7□□□□□ -0.54
HPS4-216ENST00000493455 ZNF705BP0CI00 300 aaPredicted RBP11.7□□□□□ -0.54
HPS4-216ENST00000493455 PDE6HQ13956 83 aa11.7□□□□□ -0.54
HPS4-216ENST00000493455 PSG3Q16557 428 aa11.7□□□□□ -0.54
HPS4-216ENST00000493455 MBD3L1Q8WWY6 194 aa11.7□□□□□ -0.54
HPS4-216ENST00000493455 C19orf73Q9NVV2 129 aa11.7□□□□□ -0.54
HPS4-216ENST00000493455 TEX46H3BTG2 121 aa11.69□□□□□ -0.54
HPS4-216ENST00000493455 M0R3E3 92 aa11.69□□□□□ -0.54
HPS4-216ENST00000493455 ZNF253O75346 499 aa11.69□□□□□ -0.54
HPS4-216ENST00000493455 IGKV3-20P01619 116 aa11.69□□□□□ -0.54
HPS4-216ENST00000493455 IGHV4-30-4P0DP06 118 aa11.69□□□□□ -0.54
HPS4-216ENST00000493455 RPL35AP18077 110 aaKnown RBP11.69□□□□□ -0.54
HPS4-216ENST00000493455 ZNF680Q8NEM1 530 aa11.69□□□□□ -0.54
HPS4-216ENST00000493455 MRAPQ8TCY5 172 aa11.69□□□□□ -0.54
HPS4-216ENST00000493455 RPUSD4Q96CM3 377 aaKnown RBP11.69□□□□□ -0.54
HPS4-216ENST00000493455 CITED4Q96RK1 184 aa11.69□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 126.1 ms