RNA–Protein interactions for RNA: ENST00000488543.1

HDAC6-230, Transcript of histone deacetylase 6, humanhuman

TSL 2

Gene HDAC6, Length 2,484 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-230ENST00000488543 GNG5P63218 68 aa9.51□□□□□ -0.89
HDAC6-230ENST00000488543 UBE2L3P68036 154 aaKnown RBP9.51□□□□□ -0.89
HDAC6-230ENST00000488543 C1orf194Q5T5A4 169 aa9.51□□□□□ -0.89
HDAC6-230ENST00000488543 RNF2Q99496 336 aa9.51□□□□□ -0.89
HDAC6-230ENST00000488543 TXNDC17Q9BRA2 123 aa9.51□□□□□ -0.89
HDAC6-230ENST00000488543 SLC25A2Q9BXI2 301 aa9.51□□□□□ -0.89
HDAC6-230ENST00000488543 LINC01548A6NM66 108 aa9.51□□□□□ -0.89
HDAC6-230ENST00000488543 COX7A2P2O60397 106 aa9.51□□□□□ -0.89
HDAC6-230ENST00000488543 FSHBP01225 129 aa9.51□□□□□ -0.89
HDAC6-230ENST00000488543 AMY1AP04745 511 aa9.51□□□□□ -0.89
HDAC6-230ENST00000488543 C8orf88P0DMB2 117 aa9.51□□□□□ -0.89
HDAC6-230ENST00000488543 TPPP2P59282 170 aa9.51□□□□□ -0.89
HDAC6-230ENST00000488543 PRR27Q6MZM9 219 aa9.51□□□□□ -0.89
HDAC6-230ENST00000488543 OR5AU1Q8NGC0 362 aa9.51□□□□□ -0.89
HDAC6-230ENST00000488543 OR1L4Q8NGR5 311 aa9.51□□□□□ -0.89
HDAC6-230ENST00000488543 ATP6V0BQ99437 205 aa9.51□□□□□ -0.89
HDAC6-230ENST00000488543 TXN2Q99757 166 aa9.51□□□□□ -0.89
HDAC6-230ENST00000488543 RPH3ALQ9UNE2 315 aa9.51□□□□□ -0.89
HDAC6-230ENST00000488543 NF1P21359 2839 aa9.5□□□□□ -0.89
HDAC6-230ENST00000488543 KIR2DL5BA0A0G2JN68 375 aa9.5□□□□□ -0.89
HDAC6-230ENST00000488543 KIR2DL5BA0A0G2JPC4 375 aa9.5□□□□□ -0.89
HDAC6-230ENST00000488543 TCAPO15273 167 aa9.5□□□□□ -0.89
HDAC6-230ENST00000488543 ATP6V0E1O15342 81 aa9.5□□□□□ -0.89
HDAC6-230ENST00000488543 TNFRSF6BO95407 300 aa9.5□□□□□ -0.89
HDAC6-230ENST00000488543 IGKV1-17P01599 117 aa9.5□□□□□ -0.89
HDAC6-230ENST00000488543 TIGITQ495A1 244 aa9.5□□□□□ -0.89
HDAC6-230ENST00000488543 C10orf113Q5VZT2 155 aa9.5□□□□□ -0.89
HDAC6-230ENST00000488543 KIR2DL5AQ8N109 375 aa9.5□□□□□ -0.89
HDAC6-230ENST00000488543 FAM19A2Q8N3H0 131 aa9.5□□□□□ -0.89
HDAC6-230ENST00000488543 IGHV4-59P01825 116 aa9.5□□□□□ -0.89
HDAC6-230ENST00000488543 PLP1P60201 277 aa9.5□□□□□ -0.89
HDAC6-230ENST00000488543 BATFQ16520 125 aa9.5□□□□□ -0.89
HDAC6-230ENST00000488543 KLK9Q2XQG4 91 aa9.5□□□□□ -0.89
HDAC6-230ENST00000488543 TMEM136Q6ZRR5 245 aa9.5□□□□□ -0.89
HDAC6-230ENST00000488543 IGF2BP2-AS1Q96M15 143 aa9.5□□□□□ -0.89
HDAC6-230ENST00000488543 TMEM167BQ9NRX6 74 aa9.5□□□□□ -0.89
HDAC6-230ENST00000488543 KLK9Q9UKQ9 250 aa9.5□□□□□ -0.89
HDAC6-230ENST00000488543 MOB4Q9Y3A3 225 aa9.5□□□□□ -0.89
HDAC6-230ENST00000488543 HIVEP1P15822 2718 aa9.5□□□□□ -0.89
HDAC6-230ENST00000488543 F8W735 103 aaPredicted RBP9.49□□□□□ -0.89
HDAC6-230ENST00000488543 NDUFB8O95169 186 aa9.49□□□□□ -0.89
HDAC6-230ENST00000488543 SRIP30626 198 aa9.49□□□□□ -0.89
HDAC6-230ENST00000488543 TAS2R45P59539 299 aa9.49□□□□□ -0.89
HDAC6-230ENST00000488543 NUTF2P61970 127 aaKnown RBP9.49□□□□□ -0.89
HDAC6-230ENST00000488543 IBA57Q5T440 356 aaKnown RBP9.49□□□□□ -0.89
HDAC6-230ENST00000488543 FAM110DQ8TAY7 271 aaPredicted RBP9.49□□□□□ -0.89
HDAC6-230ENST00000488543 ZNF48Q96MX3 618 aaPredicted RBP9.49□□□□□ -0.89
HDAC6-230ENST00000488543 ZNF355PQ9NSJ1 428 aa9.49□□□□□ -0.89
HDAC6-230ENST00000488543 A6NDX4 124 aa9.49□□□□□ -0.89
HDAC6-230ENST00000488543 BLNKQ8WV28 456 aa9.49□□□□□ -0.89
HDAC6-230ENST00000488543 S4R3C0 116 aa9.49□□□□□ -0.89
HDAC6-230ENST00000488543 PSG1P11464 419 aa9.48□□□□□ -0.89
HDAC6-230ENST00000488543 ORM2P19652 201 aa9.48□□□□□ -0.89
HDAC6-230ENST00000488543 Q71RC1 249 aaPredicted RBP9.48□□□□□ -0.89
HDAC6-230ENST00000488543 ATOH7Q8N100 152 aa9.48□□□□□ -0.89
HDAC6-230ENST00000488543 OR1B1Q8NGR6 318 aa9.48□□□□□ -0.89
HDAC6-230ENST00000488543 YAE1D1Q9NRH1 226 aa9.48□□□□□ -0.89
HDAC6-230ENST00000488543 ARL2-SNX15V9GYD0 113 aa9.48□□□□□ -0.89
HDAC6-230ENST00000488543 ANK3Q12955 4377 aaKnown RBP9.48□□□□□ -0.89
HDAC6-230ENST00000488543 BMPR1BO00238 502 aa9.48□□□□□ -0.89
HDAC6-230ENST00000488543 OR2J3O76001 311 aa9.48□□□□□ -0.89
HDAC6-230ENST00000488543 SSTP61278 116 aa9.48□□□□□ -0.89
HDAC6-230ENST00000488543 SLAQ13239 276 aa9.48□□□□□ -0.89
HDAC6-230ENST00000488543 LEMD1Q68G75 181 aa9.48□□□□□ -0.89
HDAC6-230ENST00000488543 UNQ5815/PRO19632Q6UWF5 114 aa9.48□□□□□ -0.89
HDAC6-230ENST00000488543 LINC00305Q7Z4B0 112 aa9.48□□□□□ -0.89
HDAC6-230ENST00000488543 DUX5Q96PT3 197 aa9.48□□□□□ -0.89
HDAC6-230ENST00000488543 SSBP4Q9BWG4 385 aaPredicted RBP9.48□□□□□ -0.89
HDAC6-230ENST00000488543 CDC42EP3Q9UKI2 254 aa9.48□□□□□ -0.89
HDAC6-230ENST00000488543 ISLRO14498 428 aa9.47□□□□□ -0.89
HDAC6-230ENST00000488543 HYPMO75409 117 aa9.47□□□□□ -0.89
HDAC6-230ENST00000488543 NTF3P20783 257 aa9.47□□□□□ -0.89
HDAC6-230ENST00000488543 AMTP48728 403 aa9.47□□□□□ -0.89
HDAC6-230ENST00000488543 BLCAPP62952 87 aa9.47□□□□□ -0.89
HDAC6-230ENST00000488543 ECSCRQ19T08 205 aa9.47□□□□□ -0.89
HDAC6-230ENST00000488543 C19orf54Q5BKX5 351 aa9.47□□□□□ -0.89
HDAC6-230ENST00000488543 GDF5OSQ5U4N7 250 aa9.47□□□□□ -0.89
HDAC6-230ENST00000488543 Q6ZS46 218 aa9.47□□□□□ -0.89
HDAC6-230ENST00000488543 LINC00527Q9UJ94 153 aa9.47□□□□□ -0.89
HDAC6-230ENST00000488543 G3V318 75 aa9.47□□□□□ -0.89
HDAC6-230ENST00000488543 ZNF253O75346 499 aa9.47□□□□□ -0.89
HDAC6-230ENST00000488543 RANP62826 216 aaKnown RBP9.47□□□□□ -0.89
HDAC6-230ENST00000488543 SIGLECL1Q8N7X8 197 aa9.47□□□□□ -0.89
HDAC6-230ENST00000488543 Q8N976 141 aa9.47□□□□□ -0.89
HDAC6-230ENST00000488543 A0A1W2PS18 150 aa9.46□□□□□ -0.89
HDAC6-230ENST00000488543 M0R143 59 aa9.46□□□□□ -0.89
HDAC6-230ENST00000488543 CRIP2P52943 208 aaPredicted RBP9.46□□□□□ -0.89
HDAC6-230ENST00000488543 MFAP4P55083 255 aa9.46□□□□□ -0.89
HDAC6-230ENST00000488543 TEX43Q6ZNM6 134 aa9.46□□□□□ -0.89
HDAC6-230ENST00000488543 FXYD5Q96DB9 178 aa9.46□□□□□ -0.89
HDAC6-230ENST00000488543 ASCL2Q99929 193 aa9.46□□□□□ -0.89
HDAC6-230ENST00000488543 PAXXQ9BUH6 204 aa9.46□□□□□ -0.89
HDAC6-230ENST00000488543 GNB1LQ9BYB4 327 aa9.46□□□□□ -0.89
HDAC6-230ENST00000488543 NRN1Q9NPD7 142 aa9.46□□□□□ -0.89
HDAC6-230ENST00000488543 C21orf62Q9NYP8 219 aa9.46□□□□□ -0.89
HDAC6-230ENST00000488543 CD5LO43866 347 aa9.46□□□□□ -0.9
HDAC6-230ENST00000488543 TOMM40O96008 361 aa9.46□□□□□ -0.9
HDAC6-230ENST00000488543 GPX1P07203 203 aa9.46□□□□□ -0.9
HDAC6-230ENST00000488543 RAB4AP20338 218 aa9.46□□□□□ -0.9
HDAC6-230ENST00000488543 LYZP61626 148 aa9.46□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 162.5 ms