RNA–Protein interactions for RNA: ENST00000488186.5

C9orf3-219, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 5

Gene C9orf3, Length 1,211 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-219ENST00000488186 OR51M1Q9H341 326 aa11.67□□□□□ -0.54
C9orf3-219ENST00000488186 HRH4Q9H3N8 390 aa11.67□□□□□ -0.54
C9orf3-219ENST00000488186 CYTL1Q9NRR1 136 aa11.67□□□□□ -0.54
C9orf3-219ENST00000488186 RPRMQ9NS64 109 aa11.67□□□□□ -0.54
C9orf3-219ENST00000488186 TMEM14CQ9P0S9 112 aa11.67□□□□□ -0.54
C9orf3-219ENST00000488186 DNAH9Q9NYC9 4486 aa11.67□□□□□ -0.54
C9orf3-219ENST00000488186 KNCNA6PVL3 124 aa11.66□□□□□ -0.54
C9orf3-219ENST00000488186 H3BTX0 84 aa11.66□□□□□ -0.54
C9orf3-219ENST00000488186 MRPS12O15235 138 aaKnown RBP11.66□□□□□ -0.54
C9orf3-219ENST00000488186 NHLRC4P0CG21 123 aaPredicted RBP11.66□□□□□ -0.54
C9orf3-219ENST00000488186 HIST1H1EP10412 219 aaKnown RBP11.66□□□□□ -0.54
C9orf3-219ENST00000488186 APOC4P55056 127 aa11.66□□□□□ -0.54
C9orf3-219ENST00000488186 KHDC3LQ587J8 217 aa11.66□□□□□ -0.54
C9orf3-219ENST00000488186 AKR1C8PQ5T2L2 129 aa11.66□□□□□ -0.54
C9orf3-219ENST00000488186 EBLN2Q6P2I7 272 aa11.66□□□□□ -0.54
C9orf3-219ENST00000488186 BLNKQ8WV28 456 aa11.66□□□□□ -0.54
C9orf3-219ENST00000488186 CITED4Q96RK1 184 aa11.66□□□□□ -0.54
C9orf3-219ENST00000488186 SLC50A1Q9BRV3 221 aa11.66□□□□□ -0.54
C9orf3-219ENST00000488186 SLC25A2Q9BXI2 301 aa11.66□□□□□ -0.54
C9orf3-219ENST00000488186 ZMAT4Q9H898 229 aa11.66□□□□□ -0.54
C9orf3-219ENST00000488186 COL7A1Q02388 2944 aa11.66□□□□□ -0.54
C9orf3-219ENST00000488186 SOCS3O14543 225 aa11.65□□□□□ -0.54
C9orf3-219ENST00000488186 PYYP10082 97 aa11.65□□□□□ -0.54
C9orf3-219ENST00000488186 SPP1P10451 314 aa11.65□□□□□ -0.54
C9orf3-219ENST00000488186 HAGHQ16775 308 aa11.65□□□□□ -0.54
C9orf3-219ENST00000488186 TMEM41BQ5BJD5 291 aa11.65□□□□□ -0.54
C9orf3-219ENST00000488186 IGFL4Q6B9Z1 124 aa11.65□□□□□ -0.54
C9orf3-219ENST00000488186 SBSPONQ8IVN8 264 aa11.65□□□□□ -0.54
C9orf3-219ENST00000488186 ZNF738Q8NE65 137 aa11.65□□□□□ -0.54
C9orf3-219ENST00000488186 C17orf77Q96MU5 243 aa11.65□□□□□ -0.54
C9orf3-219ENST00000488186 ACTR3CQ9C0K3 210 aaPredicted RBP11.65□□□□□ -0.54
C9orf3-219ENST00000488186 H3BQ15 152 aa11.64□□□□□ -0.55
C9orf3-219ENST00000488186 IGLC2P0DOY2 106 aa11.64□□□□□ -0.55
C9orf3-219ENST00000488186 CDC34P49427 236 aaPredicted RBP11.64□□□□□ -0.55
C9orf3-219ENST00000488186 LGALSLQ3ZCW2 172 aaPredicted RBP11.64□□□□□ -0.55
C9orf3-219ENST00000488186 RNF182Q8N6D2 247 aa11.64□□□□□ -0.55
C9orf3-219ENST00000488186 RNF141Q8WVD5 230 aa11.64□□□□□ -0.55
C9orf3-219ENST00000488186 ZNF586Q9NXT0 402 aa11.64□□□□□ -0.55
C9orf3-219ENST00000488186 CLEC5AQ9NY25 188 aa11.64□□□□□ -0.55
C9orf3-219ENST00000488186 OR10J4P0C629 311 aa11.63□□□□□ -0.55
C9orf3-219ENST00000488186 NBEAP1P0C6P0 100 aa11.63□□□□□ -0.55
C9orf3-219ENST00000488186 TPT1P13693 172 aaKnown RBP11.63□□□□□ -0.55
C9orf3-219ENST00000488186 PSG9Q00887 426 aa11.63□□□□□ -0.55
C9orf3-219ENST00000488186 CD300CQ08708 224 aa11.63□□□□□ -0.55
C9orf3-219ENST00000488186 PSG3Q16557 428 aa11.63□□□□□ -0.55
C9orf3-219ENST00000488186 LINC00322Q6ZN03 302 aaPredicted RBP11.63□□□□□ -0.55
C9orf3-219ENST00000488186 FOXI2Q6ZQN5 318 aa11.63□□□□□ -0.55
C9orf3-219ENST00000488186 FAM167A-AS1Q96KT0 104 aa11.63□□□□□ -0.55
C9orf3-219ENST00000488186 C20orf173Q96LM9 149 aa11.63□□□□□ -0.55
C9orf3-219ENST00000488186 CSTL1Q9H114 145 aa11.63□□□□□ -0.55
C9orf3-219ENST00000488186 ZNF331Q9NQX6 463 aaPredicted RBP11.63□□□□□ -0.55
C9orf3-219ENST00000488186 TRBV19A0A075B6N1 114 aa11.62□□□□□ -0.55
C9orf3-219ENST00000488186 TRAV8-2A0A0B4J237 113 aa11.62□□□□□ -0.55
C9orf3-219ENST00000488186 HMGB3O15347 200 aaKnown RBP11.62□□□□□ -0.55
C9orf3-219ENST00000488186 NUTF2P61970 127 aaKnown RBP11.62□□□□□ -0.55
C9orf3-219ENST00000488186 UBE2L3P68036 154 aaKnown RBP11.62□□□□□ -0.55
C9orf3-219ENST00000488186 PDE6HQ13956 83 aa11.62□□□□□ -0.55
C9orf3-219ENST00000488186 PQLC2Q6ZP29 291 aa11.62□□□□□ -0.55
C9orf3-219ENST00000488186 BAP18Q8IXM2 172 aa11.62□□□□□ -0.55
C9orf3-219ENST00000488186 RPP25LQ8N5L8 163 aaKnown RBP11.62□□□□□ -0.55
C9orf3-219ENST00000488186 OR4B1Q8NGF8 309 aa11.62□□□□□ -0.55
C9orf3-219ENST00000488186 AAMDCQ9H7C9 122 aa11.62□□□□□ -0.55
C9orf3-219ENST00000488186 KIR2DL5BA0A0G2JN68 375 aa11.61□□□□□ -0.55
C9orf3-219ENST00000488186 KIR2DL5BA0A0G2JPC4 375 aa11.61□□□□□ -0.55
C9orf3-219ENST00000488186 UBE2CO00762 179 aa11.61□□□□□ -0.55
C9orf3-219ENST00000488186 ZNF253O75346 499 aa11.61□□□□□ -0.55
C9orf3-219ENST00000488186 EIF3GO75821 320 aaKnown RBP eCLIP11.61□□□□□ -0.55
C9orf3-219ENST00000488186 DUSP14O95147 198 aaKnown RBP11.61□□□□□ -0.55
C9orf3-219ENST00000488186 SEC11BP0C7V7 166 aa11.61□□□□□ -0.55
C9orf3-219ENST00000488186 HLA-DMBP28068 263 aa11.61□□□□□ -0.55
C9orf3-219ENST00000488186 EIF5AL1Q6IS14 154 aaKnown RBP11.61□□□□□ -0.55
C9orf3-219ENST00000488186 KIR2DL5AQ8N109 375 aa11.61□□□□□ -0.55
C9orf3-219ENST00000488186 KIR2DL5BQ8NHK3 375 aa11.61□□□□□ -0.55
C9orf3-219ENST00000488186 RAB24Q969Q5 203 aa11.61□□□□□ -0.55
C9orf3-219ENST00000488186 SAT2Q96F10 170 aaPredicted RBP11.61□□□□□ -0.55
C9orf3-219ENST00000488186 SPATA25Q9BR10 227 aa11.61□□□□□ -0.55
C9orf3-219ENST00000488186 SAV1Q9H4B6 383 aaPredicted RBP11.61□□□□□ -0.55
C9orf3-219ENST00000488186 PPP1R14DQ9NXH3 145 aa11.61□□□□□ -0.55
C9orf3-219ENST00000488186 F6UB75 175 aa11.6□□□□□ -0.55
C9orf3-219ENST00000488186 H3BMM0 161 aa11.6□□□□□ -0.55
C9orf3-219ENST00000488186 SLC17A3O00476 420 aa11.6□□□□□ -0.55
C9orf3-219ENST00000488186 IGKV3-20P01619 116 aa11.6□□□□□ -0.55
C9orf3-219ENST00000488186 HLA-DRB4P13762 266 aa11.6□□□□□ -0.55
C9orf3-219ENST00000488186 DEFB1P60022 68 aa11.6□□□□□ -0.55
C9orf3-219ENST00000488186 MORN3Q6PF18 240 aaPredicted RBP11.6□□□□□ -0.55
C9orf3-219ENST00000488186 TRPT1Q86TN4 253 aaKnown RBP11.6□□□□□ -0.55
C9orf3-219ENST00000488186 IQCF2Q8IXL9 164 aa11.6□□□□□ -0.55
C9orf3-219ENST00000488186 RPUSD4Q96CM3 377 aaKnown RBP11.6□□□□□ -0.55
C9orf3-219ENST00000488186 FXYD5Q96DB9 178 aa11.6□□□□□ -0.55
C9orf3-219ENST00000488186 HLA-DRB4X5D2U9 266 aa11.6□□□□□ -0.55
C9orf3-219ENST00000488186 A0A0J9YX75 114 aa11.59□□□□□ -0.55
C9orf3-219ENST00000488186 CXorf1O96002 111 aa11.59□□□□□ -0.55
C9orf3-219ENST00000488186 CA1P00915 261 aaPredicted RBP11.59□□□□□ -0.55
C9orf3-219ENST00000488186 RANP62826 216 aaKnown RBP11.59□□□□□ -0.55
C9orf3-219ENST00000488186 SLC51BQ86UW2 128 aa11.59□□□□□ -0.55
C9orf3-219ENST00000488186 PRELID1Q9Y255 219 aa11.59□□□□□ -0.55
C9orf3-219ENST00000488186 CTXND1A0A1B0GTU2 59 aa11.58□□□□□ -0.56
C9orf3-219ENST00000488186 ZNF705FA8MVS1 300 aaPredicted RBP11.58□□□□□ -0.56
C9orf3-219ENST00000488186 UMAD1C9J7I0 102 aa11.58□□□□□ -0.56
C9orf3-219ENST00000488186 STAG3L2P0CL84 134 aa11.58□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 87.5 ms