RNA–Protein interactions for RNA: ENST00000485737.1

SMARCC1-206, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 1, humanhuman

TSL 4

Gene SMARCC1, Length 631 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC1-206ENST00000485737 GOLT1AQ6ZVE7 132 aa3.69□□□□□ -1.82
SMARCC1-206ENST00000485737 SEM1Q6ZVN7 128 aa3.69□□□□□ -1.82
SMARCC1-206ENST00000485737 ORMDL3Q8N138 153 aa3.69□□□□□ -1.82
SMARCC1-206ENST00000485737 OR2K2Q8NGT1 345 aa3.69□□□□□ -1.82
SMARCC1-206ENST00000485737 PRSS3P2Q8NHM4 247 aa3.69□□□□□ -1.82
SMARCC1-206ENST00000485737 SRSF12Q8WXF0 261 aaKnown RBP3.69□□□□□ -1.82
SMARCC1-206ENST00000485737 TNFRSF14Q92956 283 aa3.69□□□□□ -1.82
SMARCC1-206ENST00000485737 RITA1Q96K30 269 aa3.69□□□□□ -1.82
SMARCC1-206ENST00000485737 SGK494Q96LW2 274 aa3.69□□□□□ -1.82
SMARCC1-206ENST00000485737 AP1S3Q96PC3 154 aa3.69□□□□□ -1.82
SMARCC1-206ENST00000485737 SHANK2-AS3Q9BTD1 123 aa3.69□□□□□ -1.82
SMARCC1-206ENST00000485737 SCNM1Q9BWG6 230 aa3.69□□□□□ -1.82
SMARCC1-206ENST00000485737 SLC25A39Q9BZJ4 359 aaPredicted RBP3.69□□□□□ -1.82
SMARCC1-206ENST00000485737 NGBQ9NPG2 151 aa3.69□□□□□ -1.82
SMARCC1-206ENST00000485737 SIGLEC8Q9NYZ4 499 aa3.69□□□□□ -1.82
SMARCC1-206ENST00000485737 JKAMPQ9P055 326 aa3.69□□□□□ -1.82
SMARCC1-206ENST00000485737 RPH3ALQ9UNE2 315 aa3.69□□□□□ -1.82
SMARCC1-206ENST00000485737 PSG8Q9UQ74 426 aa3.69□□□□□ -1.82
SMARCC1-206ENST00000485737 RANBP2P49792 3224 aaKnown RBP3.68□□□□□ -1.82
SMARCC1-206ENST00000485737 TRAV8-1A0A0A6YYK1 113 aa3.68□□□□□ -1.82
SMARCC1-206ENST00000485737 H3BUT2 72 aa3.68□□□□□ -1.82
SMARCC1-206ENST00000485737 I3L2K1 104 aa3.68□□□□□ -1.82
SMARCC1-206ENST00000485737 SLC25A17O43808 307 aa3.68□□□□□ -1.82
SMARCC1-206ENST00000485737 FCN3O75636 299 aa3.68□□□□□ -1.82
SMARCC1-206ENST00000485737 CEACAM4O75871 244 aa3.68□□□□□ -1.82
SMARCC1-206ENST00000485737 CSN3P07498 182 aa3.68□□□□□ -1.82
SMARCC1-206ENST00000485737 FABP2P12104 132 aa3.68□□□□□ -1.82
SMARCC1-206ENST00000485737 CD59P13987 128 aa3.68□□□□□ -1.82
SMARCC1-206ENST00000485737 CCL3L1P16619 93 aa3.68□□□□□ -1.82
SMARCC1-206ENST00000485737 LOXP28300 417 aaPredicted RBP3.68□□□□□ -1.82
SMARCC1-206ENST00000485737 IFI27P40305 119 aaPredicted RBP3.68□□□□□ -1.82
SMARCC1-206ENST00000485737 CRIP1P50238 77 aa3.68□□□□□ -1.82
SMARCC1-206ENST00000485737 CACNG7P62955 275 aa3.68□□□□□ -1.82
SMARCC1-206ENST00000485737 NHLH1Q02575 133 aa3.68□□□□□ -1.82
SMARCC1-206ENST00000485737 TMEM155Q4W5P6 130 aa3.68□□□□□ -1.82
SMARCC1-206ENST00000485737 ATP1A1-AS1Q5TC04 95 aa3.68□□□□□ -1.82
SMARCC1-206ENST00000485737 FAM104BQ5XKR9 115 aa3.68□□□□□ -1.82
SMARCC1-206ENST00000485737 RUSC1-AS1Q66K80 236 aa3.68□□□□□ -1.82
SMARCC1-206ENST00000485737 IGFL4Q6B9Z1 124 aa3.68□□□□□ -1.82
SMARCC1-206ENST00000485737 ZNF474Q6S9Z5 364 aaPredicted RBP3.68□□□□□ -1.82
SMARCC1-206ENST00000485737 FOXI2Q6ZQN5 318 aa3.68□□□□□ -1.82
SMARCC1-206ENST00000485737 Q71RC1 249 aaPredicted RBP3.68□□□□□ -1.82
SMARCC1-206ENST00000485737 PRNTQ86SH4 94 aa3.68□□□□□ -1.82
SMARCC1-206ENST00000485737 IFI27L1Q96BM0 104 aa3.68□□□□□ -1.82
SMARCC1-206ENST00000485737 ZNF414Q96IQ9 312 aa3.68□□□□□ -1.82
SMARCC1-206ENST00000485737 ZNF48Q96MX3 618 aaPredicted RBP3.68□□□□□ -1.82
SMARCC1-206ENST00000485737 PRELID3AQ96N28 172 aa3.68□□□□□ -1.82
SMARCC1-206ENST00000485737 GUCD1Q96NT3 240 aa3.68□□□□□ -1.82
SMARCC1-206ENST00000485737 CNFNQ9BYD5 112 aa3.68□□□□□ -1.82
SMARCC1-206ENST00000485737 PRO3102Q9H379 93 aa3.68□□□□□ -1.82
SMARCC1-206ENST00000485737 ZMAT4Q9H898 229 aa3.68□□□□□ -1.82
SMARCC1-206ENST00000485737 THYN1Q9P016 225 aa3.68□□□□□ -1.82
SMARCC1-206ENST00000485737 INSIG2Q9Y5U4 225 aa3.68□□□□□ -1.82
SMARCC1-206ENST00000485737 SPCS1Q9Y6A9 102 aa3.68□□□□□ -1.82
SMARCC1-206ENST00000485737 PI4KAP42356 2102 aa3.68□□□□□ -1.82
SMARCC1-206ENST00000485737 DSCAML1Q8TD84 2053 aa3.67□□□□□ -1.82
SMARCC1-206ENST00000485737 TANC2Q9HCD6 1990 aa3.67□□□□□ -1.82
SMARCC1-206ENST00000485737 WI2-2373I1.2A0A1W2PRP0 233 aa3.67□□□□□ -1.82
SMARCC1-206ENST00000485737 D6R8Y8 96 aa3.67□□□□□ -1.82
SMARCC1-206ENST00000485737 LINC01619G3V211 115 aa3.67□□□□□ -1.82
SMARCC1-206ENST00000485737 H3BTX0 84 aa3.67□□□□□ -1.82
SMARCC1-206ENST00000485737 IGKV1-17P01599 117 aa3.67□□□□□ -1.82
SMARCC1-206ENST00000485737 IGHV3-48P01763 117 aa3.67□□□□□ -1.82
SMARCC1-206ENST00000485737 RBP4P02753 201 aa3.67□□□□□ -1.82
SMARCC1-206ENST00000485737 IGLC6P0CF74 106 aa3.67□□□□□ -1.82
SMARCC1-206ENST00000485737 FAM106CPP0CH98 169 aa3.67□□□□□ -1.82
SMARCC1-206ENST00000485737 WT1P19544 449 aaPredicted RBP3.67□□□□□ -1.82
SMARCC1-206ENST00000485737 EVI2AP22794 236 aa3.67□□□□□ -1.82
SMARCC1-206ENST00000485737 LYZP61626 148 aa3.67□□□□□ -1.82
SMARCC1-206ENST00000485737 SRSF1Q07955 248 aaKnown RBP eCLIP3.67□□□□□ -1.82
SMARCC1-206ENST00000485737 LOXL1Q08397 574 aaPredicted RBP3.67□□□□□ -1.82
SMARCC1-206ENST00000485737 FHL2Q14192 279 aa3.67□□□□□ -1.82
SMARCC1-206ENST00000485737 DIAPH2-AS1Q14236 149 aa3.67□□□□□ -1.82
SMARCC1-206ENST00000485737 FAM106AQ4KMX7 169 aa3.67□□□□□ -1.82
SMARCC1-206ENST00000485737 MRPL51Q4U2R6 128 aaKnown RBP3.67□□□□□ -1.82
SMARCC1-206ENST00000485737 GAGE13Q4V321 117 aa3.67□□□□□ -1.82
SMARCC1-206ENST00000485737 HES3Q5TGS1 186 aa3.67□□□□□ -1.82
SMARCC1-206ENST00000485737 HCP5Q6MZN7 132 aa3.67□□□□□ -1.82
SMARCC1-206ENST00000485737 ASCL5Q7RTU5 278 aa3.67□□□□□ -1.82
SMARCC1-206ENST00000485737 LHFPL4Q7Z7J7 247 aa3.67□□□□□ -1.82
SMARCC1-206ENST00000485737 S100A7AQ86SG5 101 aa3.67□□□□□ -1.82
SMARCC1-206ENST00000485737 EXOC3-AS1Q8N2X6 119 aa3.67□□□□□ -1.82
SMARCC1-206ENST00000485737 DEFB108BQ8NET1 73 aa3.67□□□□□ -1.82
SMARCC1-206ENST00000485737 OR8A1Q8NGG7 326 aa3.67□□□□□ -1.82
SMARCC1-206ENST00000485737 PHLDA1Q8WV24 401 aaPredicted RBP3.67□□□□□ -1.82
SMARCC1-206ENST00000485737 RNF5Q99942 180 aa3.67□□□□□ -1.82
SMARCC1-206ENST00000485737 RASL11BQ9BPW5 248 aa3.67□□□□□ -1.82
SMARCC1-206ENST00000485737 MCRIP2Q9BUT9 160 aaKnown RBP3.67□□□□□ -1.82
SMARCC1-206ENST00000485737 TM2D2Q9BX73 214 aa3.67□□□□□ -1.82
SMARCC1-206ENST00000485737 RAB1BQ9H0U4 201 aa3.67□□□□□ -1.82
SMARCC1-206ENST00000485737 KAAG1Q9UBP8 84 aa3.67□□□□□ -1.82
SMARCC1-206ENST00000485737 SMPXQ9UHP9 88 aa3.67□□□□□ -1.82
SMARCC1-206ENST00000485737 SIGLEC9Q9Y336 463 aa3.67□□□□□ -1.82
SMARCC1-206ENST00000485737 RAI1Q7Z5J4 1906 aaPredicted RBP3.67□□□□□ -1.82
SMARCC1-206ENST00000485737 DYSFO75923 2080 aa3.67□□□□□ -1.82
SMARCC1-206ENST00000485737 LAMA1P25391 3075 aa3.66□□□□□ -1.82
SMARCC1-206ENST00000485737 PPIAL4EA0A075B759 164 aa3.66□□□□□ -1.82
SMARCC1-206ENST00000485737 TMEM213A2RRL7 107 aa3.66□□□□□ -1.82
SMARCC1-206ENST00000485737 C17orf100A8MU93 164 aa3.66□□□□□ -1.82
SMARCC1-206ENST00000485737 H0Y8G0 127 aa3.66□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms