RNA–Protein interactions for RNA: ENST00000482563.1

RBM39-233, Transcript of RNA binding motif protein 39, human

TSL 2

Gene RBM39, Length 1,737 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RBM39-233	ENST00000482563	AKAIN1	P0CW23	69 aa		4.27	□□□□□ -1.73
RBM39-233	ENST00000482563	GUCA1A	P43080	201 aa	Predicted RBP	4.27	□□□□□ -1.73
RBM39-233	ENST00000482563	NNAT	Q16517	81 aa		4.27	□□□□□ -1.73
RBM39-233	ENST00000482563		Q6ZS52	159 aa		4.27	□□□□□ -1.73
RBM39-233	ENST00000482563	OR4B1	Q8NGF8	309 aa		4.27	□□□□□ -1.73
RBM39-233	ENST00000482563	CHCHD1	Q96BP2	118 aa	Known RBP	4.27	□□□□□ -1.73
RBM39-233	ENST00000482563	DPH3	Q96FX2	82 aa		4.27	□□□□□ -1.73
RBM39-233	ENST00000482563	MCEE	Q96PE7	176 aa		4.27	□□□□□ -1.73
RBM39-233	ENST00000482563	ZFP30	Q9Y2G7	519 aa		4.27	□□□□□ -1.73
RBM39-233	ENST00000482563	SBF1	O95248	1867 aa		4.27	□□□□□ -1.73
RBM39-233	ENST00000482563	SLX4	Q8IY92	1834 aa		4.27	□□□□□ -1.73
RBM39-233	ENST00000482563	RPL36A-HNRNPH2	H7BZ11	118 aa		4.26	□□□□□ -1.73
RBM39-233	ENST00000482563	OR1I1	O60431	355 aa		4.26	□□□□□ -1.73
RBM39-233	ENST00000482563	IGLV1-51	P01701	117 aa		4.26	□□□□□ -1.73
RBM39-233	ENST00000482563	ZNF705B	P0CI00	300 aa	Predicted RBP	4.26	□□□□□ -1.73
RBM39-233	ENST00000482563	PPP3R1	P63098	170 aa		4.26	□□□□□ -1.73
RBM39-233	ENST00000482563	CCL4L1	Q8NHW4	92 aa		4.26	□□□□□ -1.73
RBM39-233	ENST00000482563	HHLA3	Q9XRX5	114 aa		4.26	□□□□□ -1.73
RBM39-233	ENST00000482563	TRAV3	A0A0B4J244	114 aa		4.26	□□□□□ -1.73
RBM39-233	ENST00000482563	PITX3	O75364	302 aa		4.26	□□□□□ -1.73
RBM39-233	ENST00000482563	CPSF4	O95639	269 aa	Known RBP	4.26	□□□□□ -1.73
RBM39-233	ENST00000482563	CD14	P08571	375 aa		4.26	□□□□□ -1.73
RBM39-233	ENST00000482563	SPINT4	Q6UDR6	99 aa		4.26	□□□□□ -1.73
RBM39-233	ENST00000482563	AAED1	Q7RTV5	226 aa		4.26	□□□□□ -1.73
RBM39-233	ENST00000482563		Q8N2B8	174 aa		4.26	□□□□□ -1.73
RBM39-233	ENST00000482563	PRR34	Q9NV39	138 aa		4.26	□□□□□ -1.73
RBM39-233	ENST00000482563	CROCC	Q5TZA2	2017 aa		4.25	□□□□□ -1.73
RBM39-233	ENST00000482563	ZFC3H1	O60293	1989 aa	Known RBP	4.25	□□□□□ -1.73
RBM39-233	ENST00000482563	CD3D	P04234	171 aa		4.25	□□□□□ -1.73
RBM39-233	ENST00000482563	MT3	P25713	68 aa		4.25	□□□□□ -1.73
RBM39-233	ENST00000482563	LCE1F	Q5T754	118 aa		4.25	□□□□□ -1.73
RBM39-233	ENST00000482563	TEX261	Q6UWH6	196 aa		4.25	□□□□□ -1.73
RBM39-233	ENST00000482563	SLC35E3	Q7Z769	313 aa		4.25	□□□□□ -1.73
RBM39-233	ENST00000482563	MYH6	P13533	1939 aa		4.25	□□□□□ -1.73
RBM39-233	ENST00000482563	IGKV1D-42	A0A075B6H8	117 aa		4.24	□□□□□ -1.73
RBM39-233	ENST00000482563		A0A0J9YX75	114 aa		4.24	□□□□□ -1.73
RBM39-233	ENST00000482563	CGA	P01215	116 aa		4.24	□□□□□ -1.73
RBM39-233	ENST00000482563	SLC25A4	P12235	298 aa		4.24	□□□□□ -1.73
RBM39-233	ENST00000482563	CIB3	Q96Q77	187 aa	Predicted RBP	4.24	□□□□□ -1.73
RBM39-233	ENST00000482563	DUSP21	Q9H596	190 aa		4.24	□□□□□ -1.73
RBM39-233	ENST00000482563	PRR14L	Q5THK1	2151 aa		4.24	□□□□□ -1.73
RBM39-233	ENST00000482563	TANC2	Q9HCD6	1990 aa		4.24	□□□□□ -1.73
RBM39-233	ENST00000482563	TRAV16	A0A0A6YYK6	109 aa	Predicted RBP	4.24	□□□□□ -1.73
RBM39-233	ENST00000482563	BBIP1	A8MTZ0	92 aa		4.24	□□□□□ -1.73
RBM39-233	ENST00000482563	CDC42EP2	O14613	210 aa		4.24	□□□□□ -1.73
RBM39-233	ENST00000482563	KRTAP1-4	P0C5Y4	121 aa		4.24	□□□□□ -1.73
RBM39-233	ENST00000482563	CCL4	P13236	92 aa		4.24	□□□□□ -1.73
RBM39-233	ENST00000482563	FABP4	P15090	132 aa		4.24	□□□□□ -1.73
RBM39-233	ENST00000482563	ZNF93	P35789	620 aa	Predicted RBP	4.24	□□□□□ -1.73
RBM39-233	ENST00000482563	ROMO1	P60602	79 aa		4.24	□□□□□ -1.73
RBM39-233	ENST00000482563	BLCAP	P62952	87 aa		4.24	□□□□□ -1.73
RBM39-233	ENST00000482563	SS18	Q15532	418 aa		4.24	□□□□□ -1.73
RBM39-233	ENST00000482563	CLLU1	Q5K131	121 aa		4.24	□□□□□ -1.73
RBM39-233	ENST00000482563	POP5	Q969H6	163 aa	Known RBP	4.24	□□□□□ -1.73
RBM39-233	ENST00000482563	KLK12	Q9UKR0	248 aa		4.24	□□□□□ -1.73
RBM39-233	ENST00000482563	ATRX	P46100	2492 aa		4.23	□□□□□ -1.73
RBM39-233	ENST00000482563	IGKV2D-26	A0A0A0MRZ7	120 aa		4.23	□□□□□ -1.73
RBM39-233	ENST00000482563	SYNGR2	O43760	224 aa		4.23	□□□□□ -1.73
RBM39-233	ENST00000482563	GNG2	P59768	71 aa		4.23	□□□□□ -1.73
RBM39-233	ENST00000482563	ESRG	Q1W209	222 aa		4.23	□□□□□ -1.73
RBM39-233	ENST00000482563	PABPC1L2A	Q5JQF8	200 aa		4.23	□□□□□ -1.73
RBM39-233	ENST00000482563		Q8N814	137 aa		4.23	□□□□□ -1.73
RBM39-233	ENST00000482563	SLC35B3	Q9H1N7	401 aa		4.23	□□□□□ -1.73
RBM39-233	ENST00000482563	CCDC167	Q9P0B6	97 aa		4.23	□□□□□ -1.73
RBM39-233	ENST00000482563	CPAMD8	Q8IZJ3	1885 aa		4.23	□□□□□ -1.73
RBM39-233	ENST00000482563	NCKAP5	O14513	1909 aa		4.22	□□□□□ -1.73
RBM39-233	ENST00000482563	SCAF11	Q99590	1463 aa	Known RBP	4.22	□□□□□ -1.73
RBM39-233	ENST00000482563	IGLV3-16	A0A075B6K0	115 aa		4.22	□□□□□ -1.73
RBM39-233	ENST00000482563	SNAPC5	O75971	98 aa		4.22	□□□□□ -1.73
RBM39-233	ENST00000482563	TPT1	P13693	172 aa	Known RBP	4.22	□□□□□ -1.73
RBM39-233	ENST00000482563	GNG4	P50150	75 aa		4.22	□□□□□ -1.73
RBM39-233	ENST00000482563	MRPS36	P82909	103 aa	Known RBP	4.22	□□□□□ -1.73
RBM39-233	ENST00000482563	CLEC2B	Q92478	149 aa		4.22	□□□□□ -1.73
RBM39-233	ENST00000482563	CACNA1D	Q01668	2161 aa		4.22	□□□□□ -1.73
RBM39-233	ENST00000482563	KIAA1107	Q9UPP5	1409 aa		4.22	□□□□□ -1.73
RBM39-233	ENST00000482563	OR51F1	A6NGY5	319 aa		4.21	□□□□□ -1.73
RBM39-233	ENST00000482563		Q8N9L7	120 aa		4.21	□□□□□ -1.73
RBM39-233	ENST00000482563	NABP2	Q9BQ15	211 aa		4.21	□□□□□ -1.73
RBM39-233	ENST00000482563	SNRNP25	Q9BV90	132 aa	Known RBP	4.21	□□□□□ -1.73
RBM39-233	ENST00000482563	KIF13A	Q9H1H9	1805 aa		4.21	□□□□□ -1.74
RBM39-233	ENST00000482563	PYY	P10082	97 aa		4.21	□□□□□ -1.74
RBM39-233	ENST00000482563	NCMAP	Q5T1S8	102 aa		4.21	□□□□□ -1.74
RBM39-233	ENST00000482563	C20orf166-AS1	Q96NR2	134 aa		4.21	□□□□□ -1.74
RBM39-233	ENST00000482563	MPC1	Q9Y5U8	109 aa		4.21	□□□□□ -1.74
RBM39-233	ENST00000482563	CCDC88C	Q9P219	2028 aa		4.2	□□□□□ -1.74
RBM39-233	ENST00000482563	TRBV20-1	A0A075B6N2	111 aa		4.2	□□□□□ -1.74
RBM39-233	ENST00000482563	HIST1H1B	P16401	226 aa	Known RBP	4.2	□□□□□ -1.74
RBM39-233	ENST00000482563	BTG2	P78543	158 aa		4.2	□□□□□ -1.74
RBM39-233	ENST00000482563	NHP2	Q9NX24	153 aa	Known RBP	4.2	□□□□□ -1.74
RBM39-233	ENST00000482563	PZP	P20742	1482 aa		4.2	□□□□□ -1.74
RBM39-233	ENST00000482563	IFITM5	A6NNB3	132 aa		4.19	□□□□□ -1.74
RBM39-233	ENST00000482563	PEBP1	P30086	187 aa	Known RBP	4.19	□□□□□ -1.74
RBM39-233	ENST00000482563	RPL26L1	Q9UNX3	145 aa	Known RBP	4.19	□□□□□ -1.74
RBM39-233	ENST00000482563	IGHV3-64	A0A075B6Q5	118 aa		4.18	□□□□□ -1.74
RBM39-233	ENST00000482563		A6NN06	94 aa		4.18	□□□□□ -1.74
RBM39-233	ENST00000482563	MOBP	Q13875	183 aa		4.18	□□□□□ -1.74
RBM39-233	ENST00000482563	C1orf134	Q5TEV5	83 aa		4.18	□□□□□ -1.74
RBM39-233	ENST00000482563	LINC00467	Q9BRT7	94 aa		4.18	□□□□□ -1.74
RBM39-233	ENST00000482563	METTL1	Q9UBP6	276 aa	Known RBP	4.18	□□□□□ -1.74
RBM39-233	ENST00000482563	WDR97	A6NE52	1622 aa		4.18	□□□□□ -1.74

Retrieved 100 of 20,778 RNA–protein pairs in 93.9 ms